RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 WDR7Q9Y4E6 1490 aa7.16□□□□□ -1.26
UBP1-207ENST00000466441 PREX2Q70Z35 1606 aa7.16□□□□□ -1.26
UBP1-207ENST00000466441 PTPN23Q9H3S7 1636 aa7.16□□□□□ -1.26
UBP1-207ENST00000466441 PPRC1Q5VV67 1664 aaKnown RBP7.16□□□□□ -1.26
UBP1-207ENST00000466441 SOBPA7XYQ1 873 aa7.15□□□□□ -1.26
UBP1-207ENST00000466441 GPR182O15218 404 aa7.15□□□□□ -1.26
UBP1-207ENST00000466441 EGFRP00533 1210 aa7.15□□□□□ -1.26
UBP1-207ENST00000466441 P4HBP07237 508 aaKnown RBP7.15□□□□□ -1.26
UBP1-207ENST00000466441 MAPK8P45983 427 aa7.15□□□□□ -1.26
UBP1-207ENST00000466441 FOXR1Q6PIV2 292 aa7.15□□□□□ -1.26
UBP1-207ENST00000466441 ZNF438Q7Z4V0 828 aa7.15□□□□□ -1.26
UBP1-207ENST00000466441 PCGF6Q9BYE7 350 aa7.15□□□□□ -1.26
UBP1-207ENST00000466441 GMPR2Q9P2T1 348 aaKnown RBP7.15□□□□□ -1.26
UBP1-207ENST00000466441 ZNF644Q9H582 1327 aaPredicted RBP7.15□□□□□ -1.26
UBP1-207ENST00000466441 GPATCH8Q9UKJ3 1502 aaKnown RBP7.15□□□□□ -1.27
UBP1-207ENST00000466441 DIP2BQ9P265 1576 aa7.15□□□□□ -1.27
UBP1-207ENST00000466441 ITSN2Q9NZM3 1697 aa7.15□□□□□ -1.27
UBP1-207ENST00000466441 MAPKBP1O60336 1514 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 XYLBO75191 536 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 PRPF40AO75400 957 aaKnown RBP7.14□□□□□ -1.27
UBP1-207ENST00000466441 LDHBP07195 334 aaKnown RBP7.14□□□□□ -1.27
UBP1-207ENST00000466441 ALG1LQ6GMV1 187 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 ABCA9Q8IUA7 1624 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 SAMD9LQ8IVG5 1584 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 PMEPA1Q969W9 287 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 KLRG1Q96E93 195 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 KCNMB2Q9Y691 235 aa7.14□□□□□ -1.27
UBP1-207ENST00000466441 MYOM3Q5VTT5 1437 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 FGD6Q6ZV73 1430 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 RRBP1Q9P2E9 1410 aaKnown RBP7.13□□□□□ -1.27
UBP1-207ENST00000466441 PLEKHD1A6NEE1 506 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 C11orf95C9JLR9 678 aaPredicted RBP7.13□□□□□ -1.27
UBP1-207ENST00000466441 ITGA6P23229 1130 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 ENOX2Q16206 610 aaKnown RBP7.13□□□□□ -1.27
UBP1-207ENST00000466441 NLRP13Q86W25 1043 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 SNX29Q8TEQ0 813 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 FBF1Q8TES7 1133 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 FRMD6Q96NE9 622 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 CSRNP1Q96S65 589 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 CFHR5Q9BXR6 569 aa7.13□□□□□ -1.27
UBP1-207ENST00000466441 MAP3K4Q9Y6R4 1608 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 PTPRKQ15262 1439 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 KHNYNO15037 678 aaKnown RBP7.12□□□□□ -1.27
UBP1-207ENST00000466441 EFSO43281 561 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 CPNE3O75131 537 aaKnown RBP7.12□□□□□ -1.27
UBP1-207ENST00000466441 XPCQ01831 940 aaPredicted RBP7.12□□□□□ -1.27
UBP1-207ENST00000466441 TNP2Q05952 138 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 CCINQ13939 588 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 DBN1Q16643 649 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 ZNF428Q96B54 188 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 MRRFQ96E11 262 aaKnown RBP7.12□□□□□ -1.27
UBP1-207ENST00000466441 TRERF1Q96PN7 1200 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 ELP3Q9H9T3 547 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 MARK1Q9P0L2 795 aa7.12□□□□□ -1.27
UBP1-207ENST00000466441 CAMSAP2Q08AD1 1489 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 PNMA6FA0A0J9YX94 578 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
UBP1-207ENST00000466441 TNFRSF21O75509 655 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 MAPTP10636 758 aaKnown RBP7.11□□□□□ -1.27
UBP1-207ENST00000466441 VAMP1P23763 118 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 UBAP2LQ14157 1087 aaKnown RBP7.11□□□□□ -1.27
UBP1-207ENST00000466441 TTC39BQ5VTQ0 682 aaPredicted RBP7.11□□□□□ -1.27
UBP1-207ENST00000466441 ATXN7L1Q9ULK2 861 aaPredicted RBP7.11□□□□□ -1.27
UBP1-207ENST00000466441 USP20Q9Y2K6 914 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 CROCC2H7BZ55 1655 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 ARHGEF12Q9NZN5 1544 aa7.11□□□□□ -1.27
UBP1-207ENST00000466441 TCOF1Q13428 1488 aaKnown RBP7.11□□□□□ -1.27
UBP1-207ENST00000466441 CCNB3Q8WWL7 1395 aa7.1□□□□□ -1.27
UBP1-207ENST00000466441 KDM6BO15054 1643 aa7.1□□□□□ -1.27
UBP1-207ENST00000466441 PHACTR2O75167 634 aa7.1□□□□□ -1.27
UBP1-207ENST00000466441 FAM50AQ14320 339 aaKnown RBP7.1□□□□□ -1.27
UBP1-207ENST00000466441 TRIP4Q15650 581 aaPredicted RBP7.1□□□□□ -1.27
UBP1-207ENST00000466441 FAM182BQ5T319 152 aa7.1□□□□□ -1.27
UBP1-207ENST00000466441 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
UBP1-207ENST00000466441 NDFIP2Q9NV92 336 aa7.1□□□□□ -1.27
UBP1-207ENST00000466441 ABI2Q9NYB9 513 aaPredicted RBP7.1□□□□□ -1.27
UBP1-207ENST00000466441 ARHGAP5Q13017 1502 aa7.1□□□□□ -1.27
UBP1-207ENST00000466441 DCDC2BA2VCK2 349 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 A6NHS1 94 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 UNCXA6NJT0 531 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 BNIP3LO60238 219 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 SNRPBP14678 240 aaKnown RBP7.09□□□□□ -1.27
UBP1-207ENST00000466441 SFSWAPQ12872 951 aaKnown RBP7.09□□□□□ -1.27
UBP1-207ENST00000466441 SV2AQ7L0J3 742 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 ZNF837Q96EG3 531 aaPredicted RBP7.09□□□□□ -1.27
UBP1-207ENST00000466441 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 ZFYVE28Q9HCC9 887 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 MRS2Q9HD23 443 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 CDK11AQ9UQ88 783 aaPredicted RBP7.09□□□□□ -1.27
UBP1-207ENST00000466441 SYCP2Q9BX26 1530 aa7.09□□□□□ -1.27
UBP1-207ENST00000466441 DNMT1P26358 1616 aaKnown RBP7.09□□□□□ -1.28
UBP1-207ENST00000466441 GLI2P10070 1586 aa7.08□□□□□ -1.28
UBP1-207ENST00000466441 GIPC1O14908 333 aa7.08□□□□□ -1.28
UBP1-207ENST00000466441 PPFIA3O75145 1194 aa7.08□□□□□ -1.28
UBP1-207ENST00000466441 THBS1P07996 1170 aa7.08□□□□□ -1.28
UBP1-207ENST00000466441 GRNP28799 593 aaKnown RBP7.08□□□□□ -1.28
UBP1-207ENST00000466441 ORC1Q13415 861 aa7.08□□□□□ -1.28
UBP1-207ENST00000466441 NANOS1Q8WY41 292 aaKnown RBP7.08□□□□□ -1.28
UBP1-207ENST00000466441 GTPBP3Q969Y2 492 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms