RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ZNF526Q8TF50 670 aaPredicted RBP8.79□□□□□ -1
NCL-208ENST00000466274 ZNF837Q96EG3 531 aaPredicted RBP8.79□□□□□ -1
NCL-208ENST00000466274 GRIP2Q9C0E4 1043 aa8.79□□□□□ -1
NCL-208ENST00000466274 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
NCL-208ENST00000466274 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
NCL-208ENST00000466274 CHD4Q14839 1912 aa8.79□□□□□ -1
NCL-208ENST00000466274 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
NCL-208ENST00000466274 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
NCL-208ENST00000466274 SRSF11Q05519 484 aaKnown RBP8.78□□□□□ -1
NCL-208ENST00000466274 CLN3Q13286 438 aa8.78□□□□□ -1
NCL-208ENST00000466274 TMEM132EQ6IEE7 984 aa8.78□□□□□ -1
NCL-208ENST00000466274 CYP2U1Q7Z449 544 aa8.78□□□□□ -1
NCL-208ENST00000466274 GAS2L1Q99501 681 aaPredicted RBP8.78□□□□□ -1
NCL-208ENST00000466274 ARHGEF10LQ9HCE6 1279 aa8.78□□□□□ -1
NCL-208ENST00000466274 CASZ1Q86V15 1759 aa8.78□□□□□ -1
NCL-208ENST00000466274 ANKRD30BQ9BXX2 1392 aa8.77□□□□□ -1.01
NCL-208ENST00000466274 TRAK2O60296 914 aa8.77□□□□□ -1.01
NCL-208ENST00000466274 CDCA7Q9BWT1 371 aaPredicted RBP8.77□□□□□ -1.01
NCL-208ENST00000466274 RAB6BQ9NRW1 208 aa8.77□□□□□ -1.01
NCL-208ENST00000466274 POGKQ9P215 609 aa8.77□□□□□ -1.01
NCL-208ENST00000466274 DYRK1BQ9Y463 629 aa8.77□□□□□ -1.01
NCL-208ENST00000466274 NBPF10Q6P3W6 841 aaKnown RBP8.76□□□□□ -1.01
NCL-208ENST00000466274 NBPF15Q8N660 670 aa8.76□□□□□ -1.01
NCL-208ENST00000466274 GTPBP3Q969Y2 492 aaKnown RBP8.76□□□□□ -1.01
NCL-208ENST00000466274 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
NCL-208ENST00000466274 WWC3Q9ULE0 1092 aa8.76□□□□□ -1.01
NCL-208ENST00000466274 ADGRF5Q8IZF2 1346 aa8.76□□□□□ -1.01
NCL-208ENST00000466274 SHANK3Q9BYB0 1731 aa8.75□□□□□ -1.01
NCL-208ENST00000466274 BCL9O00512 1426 aa8.75□□□□□ -1.01
NCL-208ENST00000466274 YTHDC2Q9H6S0 1430 aaKnown RBP8.75□□□□□ -1.01
NCL-208ENST00000466274 RNF225M0QZC1 329 aaPredicted RBP8.75□□□□□ -1.01
NCL-208ENST00000466274 YBX3P16989 372 aaKnown RBP eCLIP8.75□□□□□ -1.01
NCL-208ENST00000466274 IRS1P35568 1242 aa8.75□□□□□ -1.01
NCL-208ENST00000466274 MARSP56192 900 aaKnown RBP8.75□□□□□ -1.01
NCL-208ENST00000466274 SAFB2Q14151 953 aaKnown RBP eCLIP8.75□□□□□ -1.01
NCL-208ENST00000466274 JMYQ8N9B5 988 aa8.75□□□□□ -1.01
NCL-208ENST00000466274 ZNF592Q92610 1267 aa8.75□□□□□ -1.01
NCL-208ENST00000466274 PRAM1Q96QH2 718 aa8.75□□□□□ -1.01
NCL-208ENST00000466274 FMN2Q9NZ56 1722 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 TOMM70O94826 608 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 CELA2BP08218 269 aaPredicted RBP8.74□□□□□ -1.01
NCL-208ENST00000466274 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 PTF1AQ7RTS3 328 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 NLGN2Q8NFZ4 835 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 KLRG1Q96E93 195 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 CCDC85AQ96PX6 553 aaPredicted RBP8.74□□□□□ -1.01
NCL-208ENST00000466274 ABCA3Q99758 1704 aa8.74□□□□□ -1.01
NCL-208ENST00000466274 TSGA10IPQ3SY00 556 aa8.73□□□□□ -1.01
NCL-208ENST00000466274 TPRNQ4KMQ1 711 aa8.73□□□□□ -1.01
NCL-208ENST00000466274 TIMMDC1Q9NPL8 285 aa8.73□□□□□ -1.01
NCL-208ENST00000466274 MBIPQ9NS73 344 aa8.73□□□□□ -1.01
NCL-208ENST00000466274 TBC1D2BQ9UPU7 963 aa8.73□□□□□ -1.01
NCL-208ENST00000466274 RGPD3A6NKT7 1758 aaPredicted RBP8.73□□□□□ -1.01
NCL-208ENST00000466274 RGPD4Q7Z3J3 1758 aa8.73□□□□□ -1.01
NCL-208ENST00000466274 CPDO75976 1380 aa8.73□□□□□ -1.01
NCL-208ENST00000466274 CLTCL1P53675 1640 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 ATP7BP35670 1465 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 SPATA31C2B4DYI2 1134 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 H7C1W4 665 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 APBB1O00213 710 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 GNRH1P01148 92 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 IL2RAP01589 272 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 CENPCQ03188 943 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 TOM1L2Q6ZVM7 507 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 TAS1R3Q7RTX0 852 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 MARCH10Q8NA82 808 aaPredicted RBP8.72□□□□□ -1.01
NCL-208ENST00000466274 CNKSR1Q969H4 720 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 ADCY9O60503 1353 aa8.72□□□□□ -1.01
NCL-208ENST00000466274 CRB1P82279 1406 aa8.71□□□□□ -1.01
NCL-208ENST00000466274 WASLO00401 505 aaPredicted RBP8.71□□□□□ -1.02
NCL-208ENST00000466274 EXOC5O00471 708 aa8.71□□□□□ -1.02
NCL-208ENST00000466274 NUTM2GQ5VZR2 741 aa8.71□□□□□ -1.02
NCL-208ENST00000466274 ESYT1Q9BSJ8 1104 aa8.71□□□□□ -1.02
NCL-208ENST00000466274 F11P03951 625 aa8.7□□□□□ -1.02
NCL-208ENST00000466274 ITGAEP38570 1179 aa8.7□□□□□ -1.02
NCL-208ENST00000466274 PHKA2P46019 1235 aa8.7□□□□□ -1.02
NCL-208ENST00000466274 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
NCL-208ENST00000466274 C16orf71Q8IYS4 520 aaPredicted RBP8.7□□□□□ -1.02
NCL-208ENST00000466274 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
NCL-208ENST00000466274 C14orf93Q9H972 538 aaKnown RBP8.7□□□□□ -1.02
NCL-208ENST00000466274 TFCP2L1Q9NZI6 479 aa8.7□□□□□ -1.02
NCL-208ENST00000466274 MYCP01106 439 aaPredicted RBP8.69□□□□□ -1.02
NCL-208ENST00000466274 GCP02774 474 aa8.69□□□□□ -1.02
NCL-208ENST00000466274 ZNF827Q17R98 1081 aa8.69□□□□□ -1.02
NCL-208ENST00000466274 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
NCL-208ENST00000466274 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
NCL-208ENST00000466274 TRERF1Q96PN7 1200 aa8.69□□□□□ -1.02
NCL-208ENST00000466274 HIRIP3Q9BW71 556 aaPredicted RBP8.69□□□□□ -1.02
NCL-208ENST00000466274 NUCKS1Q9H1E3 243 aaKnown RBP8.69□□□□□ -1.02
NCL-208ENST00000466274 GPAMQ9HCL2 828 aa8.69□□□□□ -1.02
NCL-208ENST00000466274 CD2APQ9Y5K6 639 aa8.69□□□□□ -1.02
NCL-208ENST00000466274 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
NCL-208ENST00000466274 IRF5Q13568 498 aa8.68□□□□□ -1.02
NCL-208ENST00000466274 SUZ12Q15022 739 aaKnown RBP8.68□□□□□ -1.02
NCL-208ENST00000466274 ACDQ96AP0 544 aa8.68□□□□□ -1.02
NCL-208ENST00000466274 XAGE2Q96GT9 111 aa8.68□□□□□ -1.02
NCL-208ENST00000466274 HRH3Q9Y5N1 445 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms