RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 MUC3BQ9H195 1237 aa5.07□□□□□ -1.6
CCDC93-205ENST00000466171 FAM13BQ9NYF5 915 aa5.07□□□□□ -1.6
CCDC93-205ENST00000466171 DLL1O00548 723 aa5.06□□□□□ -1.6
CCDC93-205ENST00000466171 OPLAHO14841 1288 aa5.06□□□□□ -1.6
CCDC93-205ENST00000466171 PTCD1O75127 700 aaKnown RBP5.06□□□□□ -1.6
CCDC93-205ENST00000466171 SOX18P35713 384 aa5.06□□□□□ -1.6
CCDC93-205ENST00000466171 TMEM130Q8N3G9 435 aa5.06□□□□□ -1.6
CCDC93-205ENST00000466171 MEGF10Q96KG7 1140 aa5.06□□□□□ -1.6
CCDC93-205ENST00000466171 J3QW42 95 aa5.05□□□□□ -1.6
CCDC93-205ENST00000466171 MMP20O60882 483 aa5.05□□□□□ -1.6
CCDC93-205ENST00000466171 DEAF1O75398 565 aaPredicted RBP5.05□□□□□ -1.6
CCDC93-205ENST00000466171 BRD2P25440 801 aaKnown RBP5.05□□□□□ -1.6
CCDC93-205ENST00000466171 SWI5Q1ZZU3 235 aa5.05□□□□□ -1.6
CCDC93-205ENST00000466171 IL22RA1Q8N6P7 574 aa5.05□□□□□ -1.6
CCDC93-205ENST00000466171 SPACA7Q96KW9 195 aa5.05□□□□□ -1.6
CCDC93-205ENST00000466171 NSUN5Q96P11 429 aaKnown RBP5.05□□□□□ -1.6
CCDC93-205ENST00000466171 LRFN2Q9ULH4 789 aa5.05□□□□□ -1.6
CCDC93-205ENST00000466171 USP20Q9Y2K6 914 aa5.05□□□□□ -1.6
CCDC93-205ENST00000466171 GSC2O15499 205 aa5.04□□□□□ -1.6
CCDC93-205ENST00000466171 HOXD8P13378 290 aaPredicted RBP5.04□□□□□ -1.6
CCDC93-205ENST00000466171 NLRP13Q86W25 1043 aa5.04□□□□□ -1.6
CCDC93-205ENST00000466171 DZIP1LQ8IYY4 767 aaKnown RBP5.04□□□□□ -1.6
CCDC93-205ENST00000466171 KRTAP4-5Q9BYR2 181 aa5.04□□□□□ -1.6
CCDC93-205ENST00000466171 PCMTD2Q9NV79 361 aa5.04□□□□□ -1.6
CCDC93-205ENST00000466171 NOVA2Q9UNW9 492 aaKnown RBP5.04□□□□□ -1.6
CCDC93-205ENST00000466171 FNDC3AQ9Y2H6 1198 aaKnown RBP5.04□□□□□ -1.6
CCDC93-205ENST00000466171 FAM177BA6PVY3 158 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 F8W735 103 aaPredicted RBP5.03□□□□□ -1.6
CCDC93-205ENST00000466171 GLB1P16278 677 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 FSTP19883 344 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 COX20Q5RI15 118 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 C16orf46Q6P387 395 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 PIK3R5Q8WYR1 880 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 PPME1Q9Y570 386 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 KCNMB2Q9Y691 235 aa5.03□□□□□ -1.6
CCDC93-205ENST00000466171 ACIN1Q9UKV3 1341 aaKnown RBP5.02□□□□□ -1.61
CCDC93-205ENST00000466171 UBAP1LF5GYI3 381 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 SMNDC1O75940 238 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC93-205ENST00000466171 ALX3O95076 343 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 HYAL2Q12891 473 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 FKBP5Q13451 457 aaPredicted RBP5.02□□□□□ -1.61
CCDC93-205ENST00000466171 CDCA8Q53HL2 280 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 CFAP70Q5T0N1 1121 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 TTC39BQ5VTQ0 682 aaPredicted RBP5.02□□□□□ -1.61
CCDC93-205ENST00000466171 FAM117BQ6P1L5 589 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 PRIMPOLQ96LW4 560 aa5.02□□□□□ -1.61
CCDC93-205ENST00000466171 PRMT3O60678 531 aa5.01□□□□□ -1.61
CCDC93-205ENST00000466171 SETDB1Q15047 1291 aa5.01□□□□□ -1.61
CCDC93-205ENST00000466171 COL26A1Q96A83 441 aa5.01□□□□□ -1.61
CCDC93-205ENST00000466171 CEP41Q9BYV8 373 aa5.01□□□□□ -1.61
CCDC93-205ENST00000466171 TRIM33Q9UPN9 1127 aa5.01□□□□□ -1.61
CCDC93-205ENST00000466171 RAXQ9Y2V3 346 aa5.01□□□□□ -1.61
CCDC93-205ENST00000466171 CDC27P30260 824 aa5□□□□□ -1.61
CCDC93-205ENST00000466171 SCNN1AP37088 669 aa5□□□□□ -1.61
CCDC93-205ENST00000466171 JAG1P78504 1218 aa5□□□□□ -1.61
CCDC93-205ENST00000466171 CEP135Q66GS9 1140 aa5□□□□□ -1.61
CCDC93-205ENST00000466171 ETFBKMTQ8IXQ9 262 aa5□□□□□ -1.61
CCDC93-205ENST00000466171 OR13H1Q8NG92 308 aa5□□□□□ -1.61
CCDC93-205ENST00000466171 STOML1Q9UBI4 398 aa5□□□□□ -1.61
CCDC93-205ENST00000466171 ZNF777Q9ULD5 760 aaPredicted RBP5□□□□□ -1.61
CCDC93-205ENST00000466171 LINC01387J3KSC0 135 aa4.99□□□□□ -1.61
CCDC93-205ENST00000466171 DHX15O43143 795 aaKnown RBP4.99□□□□□ -1.61
CCDC93-205ENST00000466171 IGLV1-40P01703 118 aa4.99□□□□□ -1.61
CCDC93-205ENST00000466171 SSTR4P31391 388 aa4.99□□□□□ -1.61
CCDC93-205ENST00000466171 CD68P34810 354 aaPredicted RBP4.99□□□□□ -1.61
CCDC93-205ENST00000466171 ELOAQ14241 798 aaKnown RBP4.99□□□□□ -1.61
CCDC93-205ENST00000466171 Q6ZS46 218 aa4.99□□□□□ -1.61
CCDC93-205ENST00000466171 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.99□□□□□ -1.61
CCDC93-205ENST00000466171 AGGF1Q8N302 714 aaeCLIP4.99□□□□□ -1.61
CCDC93-205ENST00000466171 ABTB2Q8N961 1025 aa4.99□□□□□ -1.61
CCDC93-205ENST00000466171 KLHL23Q8NBE8 558 aa4.99□□□□□ -1.61
CCDC93-205ENST00000466171 GRIK1P39086 918 aa4.98□□□□□ -1.61
CCDC93-205ENST00000466171 ZAP70P43403 619 aa4.98□□□□□ -1.61
CCDC93-205ENST00000466171 TRIP4Q15650 581 aaPredicted RBP4.98□□□□□ -1.61
CCDC93-205ENST00000466171 UVSSAQ2YD98 709 aa4.98□□□□□ -1.61
CCDC93-205ENST00000466171 ACAD11Q709F0 780 aa4.98□□□□□ -1.61
CCDC93-205ENST00000466171 LACRTQ9GZZ8 138 aa4.98□□□□□ -1.61
CCDC93-205ENST00000466171 SAP130Q9H0E3 1048 aa4.98□□□□□ -1.61
CCDC93-205ENST00000466171 RNF114Q9Y508 228 aa4.98□□□□□ -1.61
CCDC93-205ENST00000466171 RPLP1P05386 114 aaKnown RBP4.97□□□□□ -1.61
CCDC93-205ENST00000466171 PTPRAP18433 802 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 IRAK1P51617 712 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 CABP4P57796 275 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 OCLNQ16625 522 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 DUOXA2Q1HG44 320 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 NCAPG2Q86XI2 1143 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 UTP4Q969X6 686 aaKnown RBP4.97□□□□□ -1.61
CCDC93-205ENST00000466171 MKNK1Q9BUB5 465 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 ABI2Q9NYB9 513 aaPredicted RBP4.97□□□□□ -1.61
CCDC93-205ENST00000466171 CXXC1Q9P0U4 656 aaPredicted RBP4.97□□□□□ -1.61
CCDC93-205ENST00000466171 STIM2Q9P246 746 aa4.97□□□□□ -1.61
CCDC93-205ENST00000466171 FSCN2O14926 492 aa4.96□□□□□ -1.62
CCDC93-205ENST00000466171 SART1O43290 800 aaKnown RBP4.96□□□□□ -1.62
CCDC93-205ENST00000466171 TAL1P17542 331 aaPredicted RBP4.96□□□□□ -1.62
CCDC93-205ENST00000466171 CD97P48960 835 aa4.96□□□□□ -1.62
CCDC93-205ENST00000466171 ATP11AP98196 1134 aa4.96□□□□□ -1.62
CCDC93-205ENST00000466171 INTS5Q6P9B9 1019 aaKnown RBP4.96□□□□□ -1.62
CCDC93-205ENST00000466171 GALNT11Q8NCW6 608 aa4.96□□□□□ -1.62
CCDC93-205ENST00000466171 TTC16Q8NEE8 873 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms