RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 RPGRQ92834 1020 aaKnown RBP26.59■■□□□ 1.85
ITGA4-204ENST00000465522 ECHDC1Q9NTX5 307 aa26.59■■□□□ 1.85
ITGA4-204ENST00000465522 BSDC1Q9NW68 430 aaPredicted RBP26.59■■□□□ 1.85
ITGA4-204ENST00000465522 SPEF2Q9C093 1822 aa26.59■■□□□ 1.85
ITGA4-204ENST00000465522 GSPT1P15170 499 aaKnown RBP26.59■■□□□ 1.85
ITGA4-204ENST00000465522 TLR7Q9NYK1 1049 aaKnown RBP26.59■■□□□ 1.85
ITGA4-204ENST00000465522 ERC2O15083 957 aa26.58■■□□□ 1.85
ITGA4-204ENST00000465522 PDE8BO95263 885 aa26.58■■□□□ 1.85
ITGA4-204ENST00000465522 LRP5O75197 1615 aa26.57■■□□□ 1.84
ITGA4-204ENST00000465522 A0A1B0GUL7 405 aa26.57■■□□□ 1.84
ITGA4-204ENST00000465522 KLRG2A4D1S0 409 aaPredicted RBP26.57■■□□□ 1.84
ITGA4-204ENST00000465522 DBNLQ9UJU6 430 aaKnown RBP26.57■■□□□ 1.84
ITGA4-204ENST00000465522 VGLL2Q8N8G2 317 aa26.56■■□□□ 1.84
ITGA4-204ENST00000465522 HELBQ8NG08 1087 aaPredicted RBP26.56■■□□□ 1.84
ITGA4-204ENST00000465522 RBM17Q96I25 401 aaKnown RBP26.56■■□□□ 1.84
ITGA4-204ENST00000465522 DBNDD2Q9BQY9 259 aa26.56■■□□□ 1.84
ITGA4-204ENST00000465522 PDE6BP35913 854 aa26.56■■□□□ 1.84
ITGA4-204ENST00000465522 PI4K2BQ8TCG2 481 aa26.56■■□□□ 1.84
ITGA4-204ENST00000465522 COL4A1P02462 1669 aa26.56■■□□□ 1.84
ITGA4-204ENST00000465522 GLRX3O76003 335 aaKnown RBP26.55■■□□□ 1.84
ITGA4-204ENST00000465522 GRAPQ13588 217 aa26.55■■□□□ 1.84
ITGA4-204ENST00000465522 ATP2B3Q16720 1220 aa26.55■■□□□ 1.84
ITGA4-204ENST00000465522 C8orf34Q49A92 452 aa26.55■■□□□ 1.84
ITGA4-204ENST00000465522 GRAPLQ8TC17 118 aaPredicted RBP26.55■■□□□ 1.84
ITGA4-204ENST00000465522 BACH2Q9BYV9 841 aa26.55■■□□□ 1.84
ITGA4-204ENST00000465522 CHRNDQ07001 517 aa26.54■■□□□ 1.84
ITGA4-204ENST00000465522 ZNF609O15014 1411 aa26.54■■□□□ 1.84
ITGA4-204ENST00000465522 ANKRD31Q8N7Z5 1873 aa26.54■■□□□ 1.84
ITGA4-204ENST00000465522 R3HDM1Q15032 1099 aaKnown RBP26.53■■□□□ 1.84
ITGA4-204ENST00000465522 MINPP1Q9UNW1 487 aa26.53■■□□□ 1.84
ITGA4-204ENST00000465522 TAF5LO75529 589 aa26.53■■□□□ 1.84
ITGA4-204ENST00000465522 SDSP20132 328 aa26.53■■□□□ 1.84
ITGA4-204ENST00000465522 HOXA10P31260 410 aaPredicted RBP26.53■■□□□ 1.84
ITGA4-204ENST00000465522 PUM3Q15397 648 aaKnown RBP26.52■■□□□ 1.84
ITGA4-204ENST00000465522 TRIM6-TRIM34B2RNG4 842 aa26.51■■□□□ 1.83
ITGA4-204ENST00000465522 GORABQ5T7V8 394 aa26.51■■□□□ 1.83
ITGA4-204ENST00000465522 XAGE2Q96GT9 111 aa26.51■■□□□ 1.83
ITGA4-204ENST00000465522 LPIN2Q92539 896 aa26.51■■□□□ 1.83
ITGA4-204ENST00000465522 CRAMP1Q96RY5 1269 aa26.51■■□□□ 1.83
ITGA4-204ENST00000465522 SRGNP10124 158 aa26.5■■□□□ 1.83
ITGA4-204ENST00000465522 RILPL2Q969X0 211 aa26.5■■□□□ 1.83
ITGA4-204ENST00000465522 ZBTB7AO95365 584 aa26.49■■□□□ 1.83
ITGA4-204ENST00000465522 ATP5JP18859 108 aa26.49■■□□□ 1.83
ITGA4-204ENST00000465522 FGFR2P21802 821 aa26.49■■□□□ 1.83
ITGA4-204ENST00000465522 BBOX1O75936 387 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 NPR1P16066 1061 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 ADORA1P30542 326 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 CCDC158Q5M9N0 1113 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 ILDR2Q71H61 639 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 ANKRD2Q9GZV1 360 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 BOLA2Q9H3K6 86 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 MAP4K4O95819 1239 aaPredicted RBP26.48■■□□□ 1.83
ITGA4-204ENST00000465522 SLC5A1P13866 664 aa26.48■■□□□ 1.83
ITGA4-204ENST00000465522 MTFR1LQ9H019 292 aa26.47■■□□□ 1.83
ITGA4-204ENST00000465522 H0YIN7 160 aa26.46■■□□□ 1.83
ITGA4-204ENST00000465522 SNAP23O00161 211 aa26.46■■□□□ 1.83
ITGA4-204ENST00000465522 IFIT1P09914 478 aaKnown RBP26.46■■□□□ 1.83
ITGA4-204ENST00000465522 MASTLQ96GX5 879 aa26.46■■□□□ 1.83
ITGA4-204ENST00000465522 TSHZ2Q9NRE2 1034 aa26.46■■□□□ 1.83
ITGA4-204ENST00000465522 CDC45O75419 566 aa26.45■■□□□ 1.83
ITGA4-204ENST00000465522 ALDH1B1P30837 517 aa26.45■■□□□ 1.83
ITGA4-204ENST00000465522 CNTROBQ8N137 903 aa26.45■■□□□ 1.83
ITGA4-204ENST00000465522 ATF5Q9Y2D1 282 aaPredicted RBP26.45■■□□□ 1.83
ITGA4-204ENST00000465522 UBE4AQ14139 1066 aa26.45■■□□□ 1.82
ITGA4-204ENST00000465522 TTC39AQ5SRH9 613 aa26.45■■□□□ 1.82
ITGA4-204ENST00000465522 C2CD5Q86YS7 1000 aa26.45■■□□□ 1.82
ITGA4-204ENST00000465522 PSDA5PKW4 1024 aaPredicted RBP26.44■■□□□ 1.82
ITGA4-204ENST00000465522 AK9Q5TCS8 1911 aa26.44■■□□□ 1.82
ITGA4-204ENST00000465522 POLD1P28340 1107 aa26.43■■□□□ 1.82
ITGA4-204ENST00000465522 ZNF622Q969S3 477 aaKnown RBP eCLIP26.43■■□□□ 1.82
ITGA4-204ENST00000465522 A0A1B0GUL6 1792 aa26.42■■□□□ 1.82
ITGA4-204ENST00000465522 KCNJ4P48050 445 aa26.42■■□□□ 1.82
ITGA4-204ENST00000465522 TBC1D9Q6ZT07 1266 aa26.42■■□□□ 1.82
ITGA4-204ENST00000465522 TMC4Q7Z404 712 aa26.42■■□□□ 1.82
ITGA4-204ENST00000465522 ANKIB1Q9P2G1 1089 aa26.42■■□□□ 1.82
ITGA4-204ENST00000465522 CASC1Q6TDU7 716 aa26.42■■□□□ 1.82
ITGA4-204ENST00000465522 EVI5LQ96CN4 794 aa26.42■■□□□ 1.82
ITGA4-204ENST00000465522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.41■■□□□ 1.82
ITGA4-204ENST00000465522 HAUS7Q99871 368 aa26.41■■□□□ 1.82
ITGA4-204ENST00000465522 CCDC102BQ68D86 513 aa26.4■■□□□ 1.82
ITGA4-204ENST00000465522 STYK1Q6J9G0 422 aa26.4■■□□□ 1.82
ITGA4-204ENST00000465522 DNAJC2Q99543 621 aaKnown RBP26.4■■□□□ 1.82
ITGA4-204ENST00000465522 COL11A2P13942 1736 aaPredicted RBP26.4■■□□□ 1.82
ITGA4-204ENST00000465522 WTIPA6NIX2 430 aaPredicted RBP26.39■■□□□ 1.82
ITGA4-204ENST00000465522 PPEF1O14829 653 aaPredicted RBP26.39■■□□□ 1.82
ITGA4-204ENST00000465522 SEC24BO95487 1268 aa26.39■■□□□ 1.81
ITGA4-204ENST00000465522 CHRNA5P30532 468 aa26.39■■□□□ 1.81
ITGA4-204ENST00000465522 XDHP47989 1333 aa26.39■■□□□ 1.81
ITGA4-204ENST00000465522 SP8Q8IXZ3 490 aa26.39■■□□□ 1.81
ITGA4-204ENST00000465522 ARAP2Q8WZ64 1704 aa26.39■■□□□ 1.81
ITGA4-204ENST00000465522 ZNF512BQ96KM6 892 aaPredicted RBP26.39■■□□□ 1.81
ITGA4-204ENST00000465522 C10orf71Q711Q0 1435 aa26.38■■□□□ 1.81
ITGA4-204ENST00000465522 ZNF804BA4D1E1 1349 aa26.38■■□□□ 1.81
ITGA4-204ENST00000465522 PHKA1P46020 1223 aa26.38■■□□□ 1.81
ITGA4-204ENST00000465522 NSFL1CQ9UNZ2 370 aaKnown RBP26.38■■□□□ 1.81
ITGA4-204ENST00000465522 LEMD3Q9Y2U8 911 aa26.38■■□□□ 1.81
ITGA4-204ENST00000465522 NDUFB9Q9Y6M9 179 aa26.38■■□□□ 1.81
ITGA4-204ENST00000465522 UQCRFS1P1P0C7P4 283 aa26.37■■□□□ 1.81
ITGA4-204ENST00000465522 ATP6V0A2Q9Y487 856 aa26.37■■□□□ 1.81
ITGA4-204ENST00000465522 BCAMP50895 628 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms