RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 ALBP02768 609 aa6.36□□□□□ -1.39
XRN1-205ENST00000465507 MAPK1P28482 360 aa6.36□□□□□ -1.39
XRN1-205ENST00000465507 PLAURQ03405 335 aa6.36□□□□□ -1.39
XRN1-205ENST00000465507 KCNA1Q09470 495 aa6.36□□□□□ -1.39
XRN1-205ENST00000465507 C1orf127Q8N9H9 656 aa6.36□□□□□ -1.39
XRN1-205ENST00000465507 TNFRSF25Q93038 417 aa6.36□□□□□ -1.39
XRN1-205ENST00000465507 ABI2Q9NYB9 513 aaPredicted RBP6.36□□□□□ -1.39
XRN1-205ENST00000465507 NOP53Q9NZM5 478 aaKnown RBP6.36□□□□□ -1.39
XRN1-205ENST00000465507 FOXD3Q9UJU5 478 aaPredicted RBP6.36□□□□□ -1.39
XRN1-205ENST00000465507 NAGPAQ9UK23 515 aa6.36□□□□□ -1.39
XRN1-205ENST00000465507 TRPA1O75762 1119 aa6.35□□□□□ -1.39
XRN1-205ENST00000465507 POLR3DP05423 398 aaPredicted RBP6.35□□□□□ -1.39
XRN1-205ENST00000465507 CDC25BP30305 580 aa6.35□□□□□ -1.39
XRN1-205ENST00000465507 COL13A1Q5TAT6 717 aaPredicted RBP6.35□□□□□ -1.39
XRN1-205ENST00000465507 GDF6Q6KF10 455 aaPredicted RBP6.35□□□□□ -1.39
XRN1-205ENST00000465507 NCAPG2Q86XI2 1143 aa6.35□□□□□ -1.39
XRN1-205ENST00000465507 TRIM11Q96F44 468 aa6.35□□□□□ -1.39
XRN1-205ENST00000465507 SMG9Q9H0W8 520 aaKnown RBP6.35□□□□□ -1.39
XRN1-205ENST00000465507 TLR7Q9NYK1 1049 aaKnown RBP6.35□□□□□ -1.39
XRN1-205ENST00000465507 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
XRN1-205ENST00000465507 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.35□□□□□ -1.39
XRN1-205ENST00000465507 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
XRN1-205ENST00000465507 PHACTR2O75167 634 aa6.34□□□□□ -1.39
XRN1-205ENST00000465507 RGS9O75916 674 aaPredicted RBP6.34□□□□□ -1.39
XRN1-205ENST00000465507 ACPPP15309 386 aa6.34□□□□□ -1.39
XRN1-205ENST00000465507 CES1P23141 567 aa6.34□□□□□ -1.39
XRN1-205ENST00000465507 ARHGAP4P98171 946 aa6.34□□□□□ -1.39
XRN1-205ENST00000465507 PERM1Q5SV97 790 aa6.34□□□□□ -1.39
XRN1-205ENST00000465507 SPACA7Q96KW9 195 aa6.34□□□□□ -1.39
XRN1-205ENST00000465507 LOC102724428A0A0B4J2F2 783 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 ADARB2-AS1A8MUL3 147 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 EGFRP00533 1210 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 NPR3P17342 541 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 SIK1P57059 783 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 ATP11AP98196 1134 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 NIF3L1Q9GZT8 377 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 RBSNQ9H1K0 784 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 STARD13Q9Y3M8 1113 aa6.33□□□□□ -1.4
XRN1-205ENST00000465507 EREGO14944 169 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 LILRB5O75023 590 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 RPLP1P05386 114 aaKnown RBP6.32□□□□□ -1.4
XRN1-205ENST00000465507 GPLD1P80108 840 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 HYAL2Q12891 473 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 ORC1Q13415 861 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 TRAPPC3LQ5T215 181 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 PDE12Q6L8Q7 609 aaKnown RBP6.32□□□□□ -1.4
XRN1-205ENST00000465507 PLD4Q96BZ4 506 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 MDFIQ99750 246 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 PLVAPQ9BX97 442 aa6.32□□□□□ -1.4
XRN1-205ENST00000465507 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
XRN1-205ENST00000465507 GNEQ9Y223 722 aaKnown RBP6.32□□□□□ -1.4
XRN1-205ENST00000465507 TNFRSF21O75509 655 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 USP5P45974 858 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 NRLP54845 237 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 ECM1Q16610 540 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 CEP135Q66GS9 1140 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 DMRTC2Q8IXT2 367 aaPredicted RBP6.31□□□□□ -1.4
XRN1-205ENST00000465507 OR13H1Q8NG92 308 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 TRPM4Q8TD43 1214 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 LPIN3Q9BQK8 851 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 RASSF4Q9H2L5 321 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
XRN1-205ENST00000465507 PCSK7Q16549 785 aa6.3□□□□□ -1.4
XRN1-205ENST00000465507 USPL1Q5W0Q7 1092 aa6.3□□□□□ -1.4
XRN1-205ENST00000465507 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
XRN1-205ENST00000465507 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
XRN1-205ENST00000465507 LATS2Q9NRM7 1088 aa6.3□□□□□ -1.4
XRN1-205ENST00000465507 TRIM33Q9UPN9 1127 aa6.3□□□□□ -1.4
XRN1-205ENST00000465507 SPATA31C1P0DKV0 1188 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 ITGB7P26010 798 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 MAPK8P45983 427 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 EHHADHQ08426 723 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 DOC2BQ14184 412 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 GJD3Q8N144 294 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 SNX29Q8TEQ0 813 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 DCTN4Q9UJW0 460 aa6.29□□□□□ -1.4
XRN1-205ENST00000465507 FAM177BA6PVY3 158 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 PATL2C9JE40 543 aaKnown RBP6.28□□□□□ -1.4
XRN1-205ENST00000465507 GPR182O15218 404 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 PDE3BQ13370 1112 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 TMC7Q7Z402 723 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 Q8N3U1 123 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 ASAP3Q8TDY4 903 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 HHIPQ96QV1 700 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 CHRDQ9H2X0 955 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 C11orf16Q9NQ32 467 aa6.28□□□□□ -1.4
XRN1-205ENST00000465507 SMNDC1O75940 238 aaKnown RBP eCLIP6.27□□□□□ -1.41
XRN1-205ENST00000465507 AFF1P51825 1210 aaKnown RBP6.27□□□□□ -1.41
XRN1-205ENST00000465507 C20orf204Q6ZNR8 217 aa6.27□□□□□ -1.41
XRN1-205ENST00000465507 WFDC8Q8IUA0 241 aa6.27□□□□□ -1.41
XRN1-205ENST00000465507 IL22RA1Q8N6P7 574 aa6.27□□□□□ -1.41
XRN1-205ENST00000465507 AMOTL2Q9Y2J4 779 aa6.27□□□□□ -1.41
XRN1-205ENST00000465507 ZBTB7CA1YPR0 619 aa6.26□□□□□ -1.41
XRN1-205ENST00000465507 SOX18P35713 384 aa6.26□□□□□ -1.41
XRN1-205ENST00000465507 GATA4P43694 442 aa6.26□□□□□ -1.41
XRN1-205ENST00000465507 COL9A3Q14050 684 aaPredicted RBP6.26□□□□□ -1.41
XRN1-205ENST00000465507 OSMRQ99650 979 aa6.26□□□□□ -1.41
XRN1-205ENST00000465507 SEMA6BQ9H3T3 888 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms