RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 SAP130Q9H0E3 1048 aa6.32□□□□□ -1.4
SCN3A-206ENST00000465043 MUC3BQ9H195 1237 aa6.32□□□□□ -1.4
SCN3A-206ENST00000465043 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
SCN3A-206ENST00000465043 MMP20O60882 483 aa6.31□□□□□ -1.4
SCN3A-206ENST00000465043 PLD4Q96BZ4 506 aa6.31□□□□□ -1.4
SCN3A-206ENST00000465043 MKNK1Q9BUB5 465 aa6.31□□□□□ -1.4
SCN3A-206ENST00000465043 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
SCN3A-206ENST00000465043 TNFRSF10BO14763 440 aa6.3□□□□□ -1.4
SCN3A-206ENST00000465043 DYRK3O43781 588 aa6.3□□□□□ -1.4
SCN3A-206ENST00000465043 PPP1R15AO75807 674 aaPredicted RBP6.3□□□□□ -1.4
SCN3A-206ENST00000465043 ATP2B4P23634 1241 aa6.3□□□□□ -1.4
SCN3A-206ENST00000465043 ZAP70P43403 619 aa6.3□□□□□ -1.4
SCN3A-206ENST00000465043 TTC39BQ5VTQ0 682 aaPredicted RBP6.3□□□□□ -1.4
SCN3A-206ENST00000465043 OR13H1Q8NG92 308 aa6.3□□□□□ -1.4
SCN3A-206ENST00000465043 SPACA7Q96KW9 195 aa6.3□□□□□ -1.4
SCN3A-206ENST00000465043 USP20Q9Y2K6 914 aa6.3□□□□□ -1.4
SCN3A-206ENST00000465043 PCSK2P16519 638 aa6.29□□□□□ -1.4
SCN3A-206ENST00000465043 HYAL2Q12891 473 aa6.29□□□□□ -1.4
SCN3A-206ENST00000465043 NAA30Q147X3 362 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-206ENST00000465043 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
SCN3A-206ENST00000465043 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
SCN3A-206ENST00000465043 Q8N3U1 123 aa6.29□□□□□ -1.4
SCN3A-206ENST00000465043 UNC13AQ9UPW8 1703 aa6.28□□□□□ -1.4
SCN3A-206ENST00000465043 TRIP4Q15650 581 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-206ENST00000465043 ZMYM1Q5SVZ6 1142 aa6.28□□□□□ -1.4
SCN3A-206ENST00000465043 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
SCN3A-206ENST00000465043 NSUN5Q96P11 429 aaKnown RBP6.28□□□□□ -1.4
SCN3A-206ENST00000465043 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
SCN3A-206ENST00000465043 GTF3C3Q9Y5Q9 886 aa6.28□□□□□ -1.4
SCN3A-206ENST00000465043 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
SCN3A-206ENST00000465043 J3QW42 95 aa6.27□□□□□ -1.41
SCN3A-206ENST00000465043 DLL1O00548 723 aa6.27□□□□□ -1.41
SCN3A-206ENST00000465043 SMNDC1O75940 238 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCN3A-206ENST00000465043 GDF6Q6KF10 455 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-206ENST00000465043 TTC16Q8NEE8 873 aa6.27□□□□□ -1.41
SCN3A-206ENST00000465043 MTMR7Q9Y216 660 aa6.27□□□□□ -1.41
SCN3A-206ENST00000465043 FAM177BA6PVY3 158 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 ITGB7P26010 798 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 SCNN1AP37088 669 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 TMEM130Q8N3G9 435 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 IL22RA1Q8N6P7 574 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 GPR152Q8TDT2 470 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 WFDC12Q8WWY7 111 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 TP53INP1Q96A56 240 aa6.26□□□□□ -1.41
SCN3A-206ENST00000465043 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-206ENST00000465043 ABI2Q9NYB9 513 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-206ENST00000465043 DEAF1O75398 565 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-206ENST00000465043 PRSS36Q5K4E3 855 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 ALKBH2Q6NS38 261 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 CAPN12Q6ZSI9 719 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 SLC51AQ86UW1 340 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 HELQQ8TDG4 1101 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 AKTIPQ9H8T0 292 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 PPME1Q9Y570 386 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 CECR2Q9BXF3 1484 aa6.25□□□□□ -1.41
SCN3A-206ENST00000465043 KIF4AO95239 1232 aa6.24□□□□□ -1.41
SCN3A-206ENST00000465043 BICRAQ9NZM4 1560 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 SCO2A0A1W2PP80 73 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 NOS3P29474 1203 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 CDC27P30260 824 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 IREB2P48200 963 aaKnown RBP6.23□□□□□ -1.41
SCN3A-206ENST00000465043 FAM26DQ5JW98 314 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 FAM117BQ6P1L5 589 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 XKR5Q6UX68 686 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 ZNF438Q7Z4V0 828 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 PMEPA1Q969W9 287 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 NUDT16Q96DE0 195 aaKnown RBP6.23□□□□□ -1.41
SCN3A-206ENST00000465043 ELP3Q9H9T3 547 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 TRIM33Q9UPN9 1127 aa6.23□□□□□ -1.41
SCN3A-206ENST00000465043 ARID3CA6NKF2 412 aa6.22□□□□□ -1.41
SCN3A-206ENST00000465043 ZBTB39O15060 712 aa6.22□□□□□ -1.41
SCN3A-206ENST00000465043 PTPRAP18433 802 aa6.22□□□□□ -1.41
SCN3A-206ENST00000465043 SETDB1Q15047 1291 aa6.22□□□□□ -1.41
SCN3A-206ENST00000465043 NOM1Q5C9Z4 860 aaKnown RBP6.22□□□□□ -1.41
SCN3A-206ENST00000465043 NCAPG2Q86XI2 1143 aa6.22□□□□□ -1.41
SCN3A-206ENST00000465043 KRTAP1-3Q8IUG1 177 aa6.22□□□□□ -1.41
SCN3A-206ENST00000465043 SEPT3Q9UH03 358 aa6.22□□□□□ -1.41
SCN3A-206ENST00000465043 RSF1Q96T23 1441 aaPredicted RBP6.22□□□□□ -1.41
SCN3A-206ENST00000465043 F8W735 103 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-206ENST00000465043 MZF1P28698 734 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-206ENST00000465043 USP5P45974 858 aa6.21□□□□□ -1.42
SCN3A-206ENST00000465043 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
SCN3A-206ENST00000465043 CEP135Q66GS9 1140 aa6.21□□□□□ -1.42
SCN3A-206ENST00000465043 DZIP1LQ8IYY4 767 aaKnown RBP6.21□□□□□ -1.42
SCN3A-206ENST00000465043 CCDC82Q8N4S0 544 aa6.21□□□□□ -1.42
SCN3A-206ENST00000465043 KLHL23Q8NBE8 558 aa6.21□□□□□ -1.42
SCN3A-206ENST00000465043 PBX4Q9BYU1 374 aa6.21□□□□□ -1.42
SCN3A-206ENST00000465043 SLAIN2Q9P270 581 aa6.21□□□□□ -1.42
SCN3A-206ENST00000465043 MROH2BQ7Z745 1585 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 SSFA2P28290 1259 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 CABP4P57796 275 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 EHHADHQ08426 723 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 Q6ZS46 218 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 CEP120Q8N960 986 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 GTF3C2Q8WUA4 911 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-206ENST00000465043 WNT8BQ93098 351 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 CEP41Q9BYV8 373 aa6.2□□□□□ -1.42
SCN3A-206ENST00000465043 TMEM88BA6NKF7 163 aa6.19□□□□□ -1.42
SCN3A-206ENST00000465043 FAM13AO94988 1023 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms