RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 AKTIPQ9H8T0 292 aa9.38□□□□□ -0.91
UBR4-209ENST00000465036 J3QW42 95 aa9.37□□□□□ -0.91
UBR4-209ENST00000465036 HYAL3O43820 417 aaPredicted RBP9.37□□□□□ -0.91
UBR4-209ENST00000465036 NBPF11Q86T75 865 aa9.37□□□□□ -0.91
UBR4-209ENST00000465036 RNF112Q9ULX5 631 aa9.37□□□□□ -0.91
UBR4-209ENST00000465036 PRMT3O60678 531 aa9.36□□□□□ -0.91
UBR4-209ENST00000465036 PTCD1O75127 700 aaKnown RBP9.36□□□□□ -0.91
UBR4-209ENST00000465036 PRR23CQ6ZRP0 262 aa9.36□□□□□ -0.91
UBR4-209ENST00000465036 Q6ZS46 218 aa9.36□□□□□ -0.91
UBR4-209ENST00000465036 IL22RA1Q8N6P7 574 aa9.36□□□□□ -0.91
UBR4-209ENST00000465036 OR13H1Q8NG92 308 aa9.36□□□□□ -0.91
UBR4-209ENST00000465036 SAP130Q9H0E3 1048 aa9.36□□□□□ -0.91
UBR4-209ENST00000465036 CXXC1Q9P0U4 656 aaPredicted RBP9.36□□□□□ -0.91
UBR4-209ENST00000465036 F8W735 103 aaPredicted RBP9.35□□□□□ -0.91
UBR4-209ENST00000465036 ATG7O95352 703 aa9.35□□□□□ -0.91
UBR4-209ENST00000465036 SETDB1Q15047 1291 aa9.35□□□□□ -0.91
UBR4-209ENST00000465036 TRIP4Q15650 581 aaPredicted RBP9.35□□□□□ -0.91
UBR4-209ENST00000465036 PIK3R5Q8WYR1 880 aa9.35□□□□□ -0.91
UBR4-209ENST00000465036 NSUN5Q96P11 429 aaKnown RBP9.35□□□□□ -0.91
UBR4-209ENST00000465036 TNFRSF10BO14763 440 aa9.34□□□□□ -0.91
UBR4-209ENST00000465036 GDF6Q6KF10 455 aaPredicted RBP9.34□□□□□ -0.91
UBR4-209ENST00000465036 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
UBR4-209ENST00000465036 FNDC3AQ9Y2H6 1198 aaKnown RBP9.33□□□□□ -0.92
UBR4-209ENST00000465036 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
UBR4-209ENST00000465036 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
UBR4-209ENST00000465036 PPME1Q9Y570 386 aa9.32□□□□□ -0.92
UBR4-209ENST00000465036 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.31□□□□□ -0.92
UBR4-209ENST00000465036 UBAP1LF5GYI3 381 aa9.31□□□□□ -0.92
UBR4-209ENST00000465036 HYAL2Q12891 473 aa9.31□□□□□ -0.92
UBR4-209ENST00000465036 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
UBR4-209ENST00000465036 TRIM33Q9UPN9 1127 aa9.31□□□□□ -0.92
UBR4-209ENST00000465036 ZAP70P43403 619 aa9.3□□□□□ -0.92
UBR4-209ENST00000465036 STIM2Q9P246 746 aa9.3□□□□□ -0.92
UBR4-209ENST00000465036 KIF4AO95239 1232 aa9.29□□□□□ -0.92
UBR4-209ENST00000465036 ALX3O95076 343 aa9.28□□□□□ -0.92
UBR4-209ENST00000465036 FSTP19883 344 aa9.28□□□□□ -0.92
UBR4-209ENST00000465036 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.28□□□□□ -0.92
UBR4-209ENST00000465036 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
UBR4-209ENST00000465036 SPACA7Q96KW9 195 aa9.28□□□□□ -0.92
UBR4-209ENST00000465036 TM4SF5O14894 197 aa9.27□□□□□ -0.93
UBR4-209ENST00000465036 SMNDC1O75940 238 aaKnown RBP eCLIP9.27□□□□□ -0.933e-7■■■□□ 14.7
UBR4-209ENST00000465036 COL13A1Q5TAT6 717 aaPredicted RBP9.27□□□□□ -0.93
UBR4-209ENST00000465036 TMEM164Q5U3C3 297 aa9.27□□□□□ -0.93
UBR4-209ENST00000465036 TTC39BQ5VTQ0 682 aaPredicted RBP9.27□□□□□ -0.93
UBR4-209ENST00000465036 CAPN12Q6ZSI9 719 aa9.27□□□□□ -0.93
UBR4-209ENST00000465036 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
UBR4-209ENST00000465036 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
UBR4-209ENST00000465036 PDE12Q6L8Q7 609 aaKnown RBP9.26□□□□□ -0.93
UBR4-209ENST00000465036 GALNT11Q8NCW6 608 aa9.26□□□□□ -0.93
UBR4-209ENST00000465036 MKNK1Q9BUB5 465 aa9.26□□□□□ -0.93
UBR4-209ENST00000465036 ABI2Q9NYB9 513 aaPredicted RBP9.26□□□□□ -0.93
UBR4-209ENST00000465036 GSC2O15499 205 aa9.25□□□□□ -0.93
UBR4-209ENST00000465036 CDC27P30260 824 aa9.25□□□□□ -0.93
UBR4-209ENST00000465036 NAA30Q147X3 362 aaPredicted RBP9.25□□□□□ -0.93
UBR4-209ENST00000465036 RPLP1P05386 114 aaKnown RBP9.24□□□□□ -0.93
UBR4-209ENST00000465036 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
UBR4-209ENST00000465036 SCNN1AP37088 669 aa9.24□□□□□ -0.93
UBR4-209ENST00000465036 ATP11AP98196 1134 aa9.24□□□□□ -0.93
UBR4-209ENST00000465036 CEP135Q66GS9 1140 aa9.24□□□□□ -0.93
UBR4-209ENST00000465036 KLHL23Q8NBE8 558 aa9.24□□□□□ -0.93
UBR4-209ENST00000465036 GPR152Q8TDT2 470 aa9.24□□□□□ -0.93
UBR4-209ENST00000465036 PBX4Q9BYU1 374 aa9.24□□□□□ -0.93
UBR4-209ENST00000465036 RAXQ9Y2V3 346 aa9.24□□□□□ -0.93
UBR4-209ENST00000465036 LINC01387J3KSC0 135 aa9.23□□□□□ -0.93
UBR4-209ENST00000465036 ZBTB39O15060 712 aa9.23□□□□□ -0.93
UBR4-209ENST00000465036 UVSSAQ2YD98 709 aa9.23□□□□□ -0.93
UBR4-209ENST00000465036 CEP120Q8N960 986 aa9.23□□□□□ -0.93
UBR4-209ENST00000465036 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
UBR4-209ENST00000465036 CEP41Q9BYV8 373 aa9.23□□□□□ -0.93
UBR4-209ENST00000465036 ADAM19Q9H013 955 aa9.23□□□□□ -0.93
UBR4-209ENST00000465036 GLB1P16278 677 aa9.22□□□□□ -0.93
UBR4-209ENST00000465036 XKR5Q6UX68 686 aa9.22□□□□□ -0.93
UBR4-209ENST00000465036 AGGF1Q8N302 714 aaeCLIP9.22□□□□□ -0.936e-8■□□□□ 10.6
UBR4-209ENST00000465036 UBL7Q96S82 380 aaPredicted RBP9.22□□□□□ -0.93
UBR4-209ENST00000465036 RASSF4Q9H2L5 321 aa9.22□□□□□ -0.93
UBR4-209ENST00000465036 FAM117BQ6P1L5 589 aa9.21□□□□□ -0.94
UBR4-209ENST00000465036 WNT8BQ93098 351 aa9.21□□□□□ -0.94
UBR4-209ENST00000465036 ELP3Q9H9T3 547 aa9.21□□□□□ -0.94
UBR4-209ENST00000465036 FSCN2O14926 492 aa9.2□□□□□ -0.94
UBR4-209ENST00000465036 DHX15O43143 795 aaKnown RBP9.2□□□□□ -0.94
UBR4-209ENST00000465036 PTPRAP18433 802 aa9.2□□□□□ -0.94
UBR4-209ENST00000465036 CD97P48960 835 aa9.2□□□□□ -0.94
UBR4-209ENST00000465036 LACRTQ9GZZ8 138 aa9.2□□□□□ -0.94
UBR4-209ENST00000465036 WISP1O95388 367 aa9.19□□□□□ -0.94
UBR4-209ENST00000465036 IGLV1-40P01703 118 aa9.19□□□□□ -0.94
UBR4-209ENST00000465036 NCAPG2Q86XI2 1143 aa9.19□□□□□ -0.94
UBR4-209ENST00000465036 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
UBR4-209ENST00000465036 SLAIN2Q9P270 581 aa9.19□□□□□ -0.94
UBR4-209ENST00000465036 STOML1Q9UBI4 398 aa9.19□□□□□ -0.94
UBR4-209ENST00000465036 CYP2E1P05181 493 aaPredicted RBP9.18□□□□□ -0.94
UBR4-209ENST00000465036 ATP2B4P23634 1241 aa9.18□□□□□ -0.94
UBR4-209ENST00000465036 ADAMTSL4Q6UY14 1074 aa9.18□□□□□ -0.94
UBR4-209ENST00000465036 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
UBR4-209ENST00000465036 ACAD11Q709F0 780 aa9.18□□□□□ -0.94
UBR4-209ENST00000465036 ARMC10Q8N2F6 343 aa9.18□□□□□ -0.94
UBR4-209ENST00000465036 NUDT16Q96DE0 195 aaKnown RBP9.18□□□□□ -0.94
UBR4-209ENST00000465036 FAM46AQ96IP4 442 aaKnown RBP9.18□□□□□ -0.94
UBR4-209ENST00000465036 POP1Q99575 1024 aaKnown RBP9.18□□□□□ -0.94
UBR4-209ENST00000465036 KCNK4Q9NYG8 393 aa9.18□□□□□ -0.94
UBR4-209ENST00000465036 SALL4Q9UJQ4 1053 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms