RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 GRAPQ13588 217 aa15.31■□□□□ 0.04
SCAF8-205ENST00000464628 WASHC4Q2M389 1173 aa15.31■□□□□ 0.04
SCAF8-205ENST00000464628 GRAPLQ8TC17 118 aaPredicted RBP15.31■□□□□ 0.04
SCAF8-205ENST00000464628 CD99L2Q8TCZ2 262 aa15.31■□□□□ 0.04
SCAF8-205ENST00000464628 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
SCAF8-205ENST00000464628 ALDH1A1P00352 501 aa15.3■□□□□ 0.04
SCAF8-205ENST00000464628 VIL1P09327 827 aaKnown RBP15.3■□□□□ 0.04
SCAF8-205ENST00000464628 GIGYF2Q6Y7W6 1299 aaKnown RBP15.3■□□□□ 0.04
SCAF8-205ENST00000464628 KIF6Q6ZMV9 814 aa15.3■□□□□ 0.04
SCAF8-205ENST00000464628 PPP1R42Q7Z4L9 355 aa15.3■□□□□ 0.04
SCAF8-205ENST00000464628 TMEM106CQ9BVX2 250 aa15.3■□□□□ 0.04
SCAF8-205ENST00000464628 RIMBP2O15034 1052 aa15.29■□□□□ 0.04
SCAF8-205ENST00000464628 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
SCAF8-205ENST00000464628 PRAMEF18Q5VWM3 479 aa15.29■□□□□ 0.04
SCAF8-205ENST00000464628 ERO1AQ96HE7 468 aa15.29■□□□□ 0.04
SCAF8-205ENST00000464628 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
SCAF8-205ENST00000464628 COL25A1Q9BXS0 654 aaPredicted RBP15.29■□□□□ 0.04
SCAF8-205ENST00000464628 IGF2BP3O00425 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCAF8-205ENST00000464628 PTPN12Q05209 780 aaKnown RBP15.28■□□□□ 0.04
SCAF8-205ENST00000464628 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
SCAF8-205ENST00000464628 PARP10Q53GL7 1025 aa15.28■□□□□ 0.04
SCAF8-205ENST00000464628 SPRYD7Q5W111 196 aa15.28■□□□□ 0.04
SCAF8-205ENST00000464628 IFNL1Q8IU54 200 aa15.28■□□□□ 0.04
SCAF8-205ENST00000464628 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
SCAF8-205ENST00000464628 VCANP13611 3396 aa15.27■□□□□ 0.04
SCAF8-205ENST00000464628 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.04
SCAF8-205ENST00000464628 DDX46Q7L014 1031 aaKnown RBP15.27■□□□□ 0.04
SCAF8-205ENST00000464628 TMC4Q7Z404 712 aa15.27■□□□□ 0.04
SCAF8-205ENST00000464628 EFCC1Q9HA90 598 aa15.27■□□□□ 0.04
SCAF8-205ENST00000464628 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
SCAF8-205ENST00000464628 MCM10Q7L590 875 aa15.26■□□□□ 0.03
SCAF8-205ENST00000464628 LRCH3Q96II8 777 aa15.26■□□□□ 0.03
SCAF8-205ENST00000464628 UTP14AQ9BVJ6 771 aaKnown RBP15.26■□□□□ 0.03
SCAF8-205ENST00000464628 OTOFQ9HC10 1997 aa15.25■□□□□ 0.03
SCAF8-205ENST00000464628 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
SCAF8-205ENST00000464628 GMLQ99445 158 aa15.25■□□□□ 0.03
SCAF8-205ENST00000464628 MYOZ2Q9NPC6 264 aa15.25■□□□□ 0.03
SCAF8-205ENST00000464628 NSFL1CQ9UNZ2 370 aaKnown RBP15.25■□□□□ 0.03
SCAF8-205ENST00000464628 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
SCAF8-205ENST00000464628 MYL6BP14649 208 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 GPSM2P81274 684 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 CRHR2Q13324 411 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 TCIRG1Q13488 830 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 LDLRAD1Q5T700 205 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 RSBN1LQ6PCB5 846 aaPredicted RBP15.24■□□□□ 0.03
SCAF8-205ENST00000464628 AGBL3Q8NEM8 1001 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 SHISA4Q96DD7 197 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 KNSTRNQ9Y448 316 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 ECM29Q5VYK3 1845 aa15.24■□□□□ 0.03
SCAF8-205ENST00000464628 MANSC4A6NHS7 340 aaPredicted RBP15.23■□□□□ 0.03
SCAF8-205ENST00000464628 C6orf229H3BNL8 230 aa15.23■□□□□ 0.03
SCAF8-205ENST00000464628 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
SCAF8-205ENST00000464628 LRP10Q7Z4F1 713 aa15.23■□□□□ 0.03
SCAF8-205ENST00000464628 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
SCAF8-205ENST00000464628 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
SCAF8-205ENST00000464628 A0A1W2PPC1 479 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 WTIPA6NIX2 430 aaPredicted RBP15.22■□□□□ 0.03
SCAF8-205ENST00000464628 INHBEP58166 350 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 SLC4A8Q2Y0W8 1093 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 NBPF9Q3BBW0 867 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 SLC9C1Q4G0N8 1177 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 TBC1D16Q8TBP0 767 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 EYA3Q99504 573 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 RSPH6AQ9H0K4 717 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 SSC5DA1L4H1 1573 aa15.22■□□□□ 0.03
SCAF8-205ENST00000464628 ALPK3Q96L96 1907 aa15.21■□□□□ 0.03
SCAF8-205ENST00000464628 PRKAR2BP31323 418 aa15.21■□□□□ 0.03
SCAF8-205ENST00000464628 SP3Q02447 781 aa15.21■□□□□ 0.03
SCAF8-205ENST00000464628 USP17L8P0C7I0 530 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 ZBTB48P10074 688 aaPredicted RBP15.2■□□□□ 0.02
SCAF8-205ENST00000464628 PRKG1Q13976 671 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 ARMC9Q7Z3E5 817 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 UBE2Q1Q7Z7E8 422 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 NLRP10Q86W26 655 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 DPF3Q92784 378 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 FZD1Q9UP38 647 aa15.2■□□□□ 0.02
SCAF8-205ENST00000464628 MYCP01106 439 aaPredicted RBP15.19■□□□□ 0.02
SCAF8-205ENST00000464628 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
SCAF8-205ENST00000464628 NF2P35240 595 aa15.19■□□□□ 0.02
SCAF8-205ENST00000464628 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
SCAF8-205ENST00000464628 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
SCAF8-205ENST00000464628 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
SCAF8-205ENST00000464628 ANGEL1Q9UNK9 670 aaKnown RBP15.18■□□□□ 0.02
SCAF8-205ENST00000464628 STXBP5LQ9Y2K9 1186 aa15.18■□□□□ 0.02
SCAF8-205ENST00000464628 COL1A1P02452 1464 aaPredicted RBP15.18■□□□□ 0.02
SCAF8-205ENST00000464628 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
SCAF8-205ENST00000464628 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
SCAF8-205ENST00000464628 WNT10BO00744 389 aa15.17■□□□□ 0.02
SCAF8-205ENST00000464628 ZBTB7BO15156 539 aaPredicted RBP15.17■□□□□ 0.02
SCAF8-205ENST00000464628 EIF4A1P60842 406 aaKnown RBP15.17■□□□□ 0.02
SCAF8-205ENST00000464628 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
SCAF8-205ENST00000464628 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
SCAF8-205ENST00000464628 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
SCAF8-205ENST00000464628 GJA5P36382 358 aa15.16■□□□□ 0.02
SCAF8-205ENST00000464628 MAP3K11Q16584 847 aa15.16■□□□□ 0.02
SCAF8-205ENST00000464628 PTPN18Q99952 460 aa15.16■□□□□ 0.02
SCAF8-205ENST00000464628 THUMPD2Q9BTF0 503 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms