RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 LRMPQ12912 555 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 ERBB4Q15303 1308 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 ATP2B3Q16720 1220 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 CCDC102BQ68D86 513 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
HPS4-208ENST00000464362 DDX17Q92841 729 aaKnown RBP10.5□□□□□ -0.73
HPS4-208ENST00000464362 EAF2Q96CJ1 260 aaPredicted RBP10.5□□□□□ -0.73
HPS4-208ENST00000464362 DDX21Q9NR30 783 aaKnown RBP eCLIP10.5□□□□□ -0.73
HPS4-208ENST00000464362 STX17P56962 302 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 LEKR1Q6ZMV7 388 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 FAM89AQ96GI7 184 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 ZKSCAN3Q9BRR0 538 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 ZMYM3Q14202 1370 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 RIOK3O14730 519 aaKnown RBP10.49□□□□□ -0.73
HPS4-208ENST00000464362 SPTLC2O15270 562 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 AK7Q96M32 723 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 A0A0D9SFI3 127 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 DHX32Q7L7V1 743 aaKnown RBP10.49□□□□□ -0.73
HPS4-208ENST00000464362 CBX8Q9HC52 389 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 ADGBQ8N7X0 1667 aa10.49□□□□□ -0.73
HPS4-208ENST00000464362 H0YHG0 523 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 LTKP29376 864 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 KIAA1328Q86T90 577 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 ZBTB43O43298 467 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 ZSCAN12O43309 604 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 RPS6KB1P23443 525 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 U2AF2P26368 475 aaKnown RBP eCLIP10.48□□□□□ -0.731e-6■■□□□ 13.6
HPS4-208ENST00000464362 STIM1Q13586 685 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 SPECC1Q5M775 1068 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 WASF1Q92558 559 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 A1BGP04217 495 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 GSDMDP57764 484 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 PROSER3Q2NL68 480 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 SYT10Q6XYQ8 523 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 MIGA1Q8NAN2 632 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
HPS4-208ENST00000464362 LEO1Q8WVC0 666 aaPredicted RBP10.48□□□□□ -0.73
HPS4-208ENST00000464362 IP6K1Q92551 441 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
HPS4-208ENST00000464362 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 CASQ1P31415 396 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 EIF4A1P60842 406 aaKnown RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 ZNF496Q96IT1 587 aaPredicted RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 NUP88Q99567 741 aaPredicted RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 KIF2AO00139 706 aaPredicted RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 CCDC181Q5TID7 509 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 ZNF790Q6PG37 636 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 MFSD6Q6ZSS7 791 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 CTCFLQ8NI51 663 aaPredicted RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 VAT1LQ9HCJ6 419 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 TCEAL9Q9UHQ7 104 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 TPCN1Q9ULQ1 816 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 TTC6Q86TZ1 520 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 SSH3Q8TE77 659 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 MYL10Q9BUA6 226 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 JAG2Q9Y219 1238 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 KDM5AP29375 1690 aaKnown RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 IL15P40933 162 aaPredicted RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 NLRP5P59047 1200 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 KARSQ15046 597 aaKnown RBP10.47□□□□□ -0.73
HPS4-208ENST00000464362 SOGA3Q5TF21 947 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 IQCA1Q86XH1 822 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 MKNK2Q9HBH9 465 aa10.47□□□□□ -0.73
HPS4-208ENST00000464362 A0A1B0GUL7 405 aa10.46□□□□□ -0.73
HPS4-208ENST00000464362 KIF5CO60282 957 aa10.46□□□□□ -0.73
HPS4-208ENST00000464362 ERLIN1O75477 346 aa10.46□□□□□ -0.73
HPS4-208ENST00000464362 TNNI3KQ59H18 835 aa10.46□□□□□ -0.73
HPS4-208ENST00000464362 CCDC43Q96MW1 224 aaKnown RBP10.46□□□□□ -0.73
HPS4-208ENST00000464362 PPP1R9BQ96SB3 815 aa10.46□□□□□ -0.73
HPS4-208ENST00000464362 TSPYL1Q9H0U9 437 aa10.46□□□□□ -0.73
HPS4-208ENST00000464362 FPGT-TNNI3KV9GXZ4 949 aa10.46□□□□□ -0.73
HPS4-208ENST00000464362 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 NEMFO60524 1076 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 TAF3Q5VWG9 929 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 TLR7Q9NYK1 1049 aaKnown RBP10.46□□□□□ -0.74
HPS4-208ENST00000464362 MTMR6Q9Y217 621 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 SLC5A1P13866 664 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 ZFYVE27Q5T4F4 411 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 KCNG4Q8TDN1 519 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 YEATS2Q9ULM3 1422 aa10.46□□□□□ -0.74
HPS4-208ENST00000464362 METP08581 1390 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 MCM6Q14566 821 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 JAKMIP3Q5VZ66 844 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 CWC15Q9P013 229 aaKnown RBP10.45□□□□□ -0.74
HPS4-208ENST00000464362 PRDM15P57071 1507 aaPredicted RBP10.45□□□□□ -0.74
HPS4-208ENST00000464362 NR1I2O75469 434 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 LARGE1O95461 756 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 TRMT1LQ7Z2T5 733 aaKnown RBP10.45□□□□□ -0.74
HPS4-208ENST00000464362 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
HPS4-208ENST00000464362 DHX58Q96C10 678 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 CEP131Q9UPN4 1083 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 PAXBP1Q9Y5B6 917 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 TTC37Q6PGP7 1564 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 SBNO1A3KN83 1393 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 B4E1Z4 1266 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 N4BP3O15049 544 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 IDEP14735 1019 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 CT47A1Q5JQC4 288 aaPredicted RBP10.45□□□□□ -0.74
HPS4-208ENST00000464362 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
HPS4-208ENST00000464362 RNF113AO15541 343 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms