RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 GRAPLQ8TC17 118 aaPredicted RBP16.67■□□□□ 0.26
SNX17-205ENST00000464279 DPF3Q92784 378 aa16.67■□□□□ 0.26
SNX17-205ENST00000464279 ZBTB3Q9H5J0 574 aa16.67■□□□□ 0.26
SNX17-205ENST00000464279 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
SNX17-205ENST00000464279 A0A1W2PPC1 479 aa16.66■□□□□ 0.26
SNX17-205ENST00000464279 RIMBP2O15034 1052 aa16.66■□□□□ 0.26
SNX17-205ENST00000464279 VIL1P09327 827 aaKnown RBP16.66■□□□□ 0.26
SNX17-205ENST00000464279 SLC10A5Q5PT55 438 aa16.66■□□□□ 0.26
SNX17-205ENST00000464279 SPRYD7Q5W111 196 aa16.66■□□□□ 0.26
SNX17-205ENST00000464279 TTLL7Q6ZT98 887 aa16.66■□□□□ 0.26
SNX17-205ENST00000464279 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
SNX17-205ENST00000464279 MANSC4A6NHS7 340 aaPredicted RBP16.65■□□□□ 0.26
SNX17-205ENST00000464279 SOX1O00570 391 aaPredicted RBP16.65■□□□□ 0.26
SNX17-205ENST00000464279 INHBEP58166 350 aa16.65■□□□□ 0.26
SNX17-205ENST00000464279 DOK7Q18PE1 504 aa16.65■□□□□ 0.26
SNX17-205ENST00000464279 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
SNX17-205ENST00000464279 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
SNX17-205ENST00000464279 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
SNX17-205ENST00000464279 LRCH3Q96II8 777 aa16.64■□□□□ 0.25
SNX17-205ENST00000464279 UTP14AQ9BVJ6 771 aaKnown RBP16.64■□□□□ 0.25
SNX17-205ENST00000464279 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
SNX17-205ENST00000464279 LRRC37AA6NMS7 1700 aa16.64■□□□□ 0.25
SNX17-205ENST00000464279 LAMB4A4D0S4 1761 aa16.64■□□□□ 0.25
SNX17-205ENST00000464279 C6orf229H3BNL8 230 aa16.63■□□□□ 0.25
SNX17-205ENST00000464279 GIGYF2Q6Y7W6 1299 aaKnown RBP16.63■□□□□ 0.25
SNX17-205ENST00000464279 ARMC9Q7Z3E5 817 aa16.63■□□□□ 0.25
SNX17-205ENST00000464279 EYA3Q99504 573 aa16.63■□□□□ 0.25
SNX17-205ENST00000464279 NSFL1CQ9UNZ2 370 aaKnown RBP16.63■□□□□ 0.25
SNX17-205ENST00000464279 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
SNX17-205ENST00000464279 MYOZ2Q9NPC6 264 aa16.62■□□□□ 0.25
SNX17-205ENST00000464279 PTCH2Q9Y6C5 1203 aa16.62■□□□□ 0.25
SNX17-205ENST00000464279 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNX17-205ENST00000464279 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
SNX17-205ENST00000464279 SP3Q02447 781 aa16.61■□□□□ 0.25
SNX17-205ENST00000464279 CRHR2Q13324 411 aa16.61■□□□□ 0.25
SNX17-205ENST00000464279 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
SNX17-205ENST00000464279 STXBP5LQ9Y2K9 1186 aa16.61■□□□□ 0.25
SNX17-205ENST00000464279 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
SNX17-205ENST00000464279 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
SNX17-205ENST00000464279 ANKRD36CQ5JPF3 1778 aa16.6■□□□□ 0.25
SNX17-205ENST00000464279 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
SNX17-205ENST00000464279 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
SNX17-205ENST00000464279 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
SNX17-205ENST00000464279 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
SNX17-205ENST00000464279 NR2E3Q9Y5X4 410 aa16.6■□□□□ 0.25
SNX17-205ENST00000464279 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
SNX17-205ENST00000464279 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
SNX17-205ENST00000464279 USP17L8P0C7I0 530 aa16.59■□□□□ 0.25
SNX17-205ENST00000464279 MYL6BP14649 208 aa16.59■□□□□ 0.25
SNX17-205ENST00000464279 CAP1Q01518 475 aa16.59■□□□□ 0.25
SNX17-205ENST00000464279 ARHGEF6Q15052 776 aa16.59■□□□□ 0.25
SNX17-205ENST00000464279 HTATIP2Q9BUP3 242 aa16.59■□□□□ 0.25
SNX17-205ENST00000464279 LAMB2P55268 1798 aa16.59■□□□□ 0.25
SNX17-205ENST00000464279 LAMA3Q16787 3333 aa16.58■□□□□ 0.25
SNX17-205ENST00000464279 ZBTB48P10074 688 aaPredicted RBP16.58■□□□□ 0.24
SNX17-205ENST00000464279 PRKG1Q13976 671 aa16.58■□□□□ 0.24
SNX17-205ENST00000464279 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.24
SNX17-205ENST00000464279 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
SNX17-205ENST00000464279 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
SNX17-205ENST00000464279 G3V3G9 751 aa16.57■□□□□ 0.24
SNX17-205ENST00000464279 GPSM2P81274 684 aa16.57■□□□□ 0.24
SNX17-205ENST00000464279 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
SNX17-205ENST00000464279 GPR153Q6NV75 609 aa16.57■□□□□ 0.24
SNX17-205ENST00000464279 MCM10Q7L590 875 aa16.57■□□□□ 0.24
SNX17-205ENST00000464279 DEFB123Q8N688 67 aa16.57■□□□□ 0.24
SNX17-205ENST00000464279 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
SNX17-205ENST00000464279 ZBTB7BO15156 539 aaPredicted RBP16.56■□□□□ 0.24
SNX17-205ENST00000464279 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNX17-205ENST00000464279 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
SNX17-205ENST00000464279 SLC10A4Q96EP9 437 aa16.56■□□□□ 0.24
SNX17-205ENST00000464279 ZC3H12CQ9C0D7 883 aaKnown RBP16.56■□□□□ 0.24
SNX17-205ENST00000464279 PRDM6Q9NQX0 595 aa16.56■□□□□ 0.24
SNX17-205ENST00000464279 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
SNX17-205ENST00000464279 NBPF9Q3BBW0 867 aa16.55■□□□□ 0.24
SNX17-205ENST00000464279 TBC1D16Q8TBP0 767 aa16.55■□□□□ 0.24
SNX17-205ENST00000464279 SH3TC2Q8TF17 1288 aa16.55■□□□□ 0.24
SNX17-205ENST00000464279 WNK4Q96J92 1243 aa16.55■□□□□ 0.24
SNX17-205ENST00000464279 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
SNX17-205ENST00000464279 GMLQ99445 158 aa16.55■□□□□ 0.24
SNX17-205ENST00000464279 UNC80Q8N2C7 3258 aa16.55■□□□□ 0.24
SNX17-205ENST00000464279 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
SNX17-205ENST00000464279 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
SNX17-205ENST00000464279 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
SNX17-205ENST00000464279 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
SNX17-205ENST00000464279 SH3TC1Q8TE82 1336 aa16.52■□□□□ 0.24
SNX17-205ENST00000464279 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
SNX17-205ENST00000464279 Q7L0L9 218 aa16.52■□□□□ 0.24
SNX17-205ENST00000464279 NKX2-3Q8TAU0 364 aa16.52■□□□□ 0.24
SNX17-205ENST00000464279 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
SNX17-205ENST00000464279 TAF1P21675 1872 aa16.52■□□□□ 0.23
SNX17-205ENST00000464279 LAMB1P07942 1786 aa16.51■□□□□ 0.23
SNX17-205ENST00000464279 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
SNX17-205ENST00000464279 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
SNX17-205ENST00000464279 NLRP10Q86W26 655 aa16.51■□□□□ 0.23
SNX17-205ENST00000464279 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
SNX17-205ENST00000464279 WNT10BO00744 389 aa16.5■□□□□ 0.23
SNX17-205ENST00000464279 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
SNX17-205ENST00000464279 UFL1O94874 794 aa16.5■□□□□ 0.23
SNX17-205ENST00000464279 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
SNX17-205ENST00000464279 APOBEC3FQ8IUX4 373 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms