RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ITGB4P16144 1822 aa24.26■■□□□ 1.47
TUBGCP3-204ENST00000464139 GPTP24298 496 aa24.26■■□□□ 1.47
TUBGCP3-204ENST00000464139 TRIM28Q13263 835 aaKnown RBP24.26■■□□□ 1.47
TUBGCP3-204ENST00000464139 PCCAP05165 728 aaPredicted RBP24.26■■□□□ 1.47
TUBGCP3-204ENST00000464139 SLC4A9Q96Q91 983 aa24.26■■□□□ 1.47
TUBGCP3-204ENST00000464139 RNF214Q8ND24 703 aa24.25■■□□□ 1.47
TUBGCP3-204ENST00000464139 SYTL4Q96C24 671 aaPredicted RBP24.25■■□□□ 1.47
TUBGCP3-204ENST00000464139 ADORA1P30542 326 aa24.25■■□□□ 1.47
TUBGCP3-204ENST00000464139 ZBTB38Q8NAP3 1195 aaPredicted RBP24.24■■□□□ 1.47
TUBGCP3-204ENST00000464139 HELLSQ9NRZ9 838 aa24.24■■□□□ 1.47
TUBGCP3-204ENST00000464139 MAP3K15Q6ZN16 1313 aa24.24■■□□□ 1.47
TUBGCP3-204ENST00000464139 ZMYM1Q5SVZ6 1142 aa24.24■■□□□ 1.47
TUBGCP3-204ENST00000464139 Q6ZUG5 572 aa24.24■■□□□ 1.47
TUBGCP3-204ENST00000464139 STOX1Q6ZVD7 989 aa24.24■■□□□ 1.47
TUBGCP3-204ENST00000464139 LRRC2Q9BYS8 371 aa24.24■■□□□ 1.47
TUBGCP3-204ENST00000464139 FKBP4Q02790 459 aaKnown RBP eCLIP24.23■■□□□ 1.47
TUBGCP3-204ENST00000464139 TAF7LQ5H9L4 462 aa24.23■■□□□ 1.47
TUBGCP3-204ENST00000464139 GIGYF2Q6Y7W6 1299 aaKnown RBP24.23■■□□□ 1.47
TUBGCP3-204ENST00000464139 CDC37L1Q7L3B6 337 aa24.23■■□□□ 1.47
TUBGCP3-204ENST00000464139 FERMT3Q86UX7 667 aa24.23■■□□□ 1.47
TUBGCP3-204ENST00000464139 UBE2HP62256 183 aa24.23■■□□□ 1.47
TUBGCP3-204ENST00000464139 CLCN1P35523 988 aa24.22■■□□□ 1.47
TUBGCP3-204ENST00000464139 GORABQ5T7V8 394 aa24.22■■□□□ 1.47
TUBGCP3-204ENST00000464139 TSPY26PQ9H489 355 aa24.22■■□□□ 1.47
TUBGCP3-204ENST00000464139 A0A0G2JLW4 131 aa24.22■■□□□ 1.47
TUBGCP3-204ENST00000464139 IFIT5Q13325 482 aaKnown RBP24.22■■□□□ 1.47
TUBGCP3-204ENST00000464139 XAGE2Q96GT9 111 aa24.22■■□□□ 1.47
TUBGCP3-204ENST00000464139 DISP2A7MBM2 1401 aa24.22■■□□□ 1.47
TUBGCP3-204ENST00000464139 BCL9O00512 1426 aa24.21■■□□□ 1.47
TUBGCP3-204ENST00000464139 RNF113AO15541 343 aaKnown RBP24.21■■□□□ 1.47
TUBGCP3-204ENST00000464139 CSF1RP07333 972 aa24.21■■□□□ 1.47
TUBGCP3-204ENST00000464139 CYP19A1P11511 503 aaPredicted RBP24.21■■□□□ 1.47
TUBGCP3-204ENST00000464139 PLA2G12BQ9BX93 195 aa24.21■■□□□ 1.47
TUBGCP3-204ENST00000464139 ZBTB1Q9Y2K1 713 aa24.21■■□□□ 1.47
TUBGCP3-204ENST00000464139 MAST3O60307 1309 aa24.21■■□□□ 1.47
TUBGCP3-204ENST00000464139 EXOC5O00471 708 aa24.2■■□□□ 1.46
TUBGCP3-204ENST00000464139 HSP90B1P14625 803 aaKnown RBP24.2■■□□□ 1.46
TUBGCP3-204ENST00000464139 CCDC158Q5M9N0 1113 aa24.2■■□□□ 1.46
TUBGCP3-204ENST00000464139 TTC39AQ5SRH9 613 aa24.2■■□□□ 1.46
TUBGCP3-204ENST00000464139 FAM173BQ6P4H8 233 aa24.2■■□□□ 1.46
TUBGCP3-204ENST00000464139 NLRP10Q86W26 655 aa24.2■■□□□ 1.46
TUBGCP3-204ENST00000464139 HSPD1P10809 573 aaKnown RBP24.2■■□□□ 1.46
TUBGCP3-204ENST00000464139 JAK2O60674 1132 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 PHF14O94880 888 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 BRF1Q92994 677 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 GTF3C6Q969F1 213 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 DSCC1Q9BVC3 393 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 AKAP2Q9Y2D5 859 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 M0R2C6 588 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 PDCP20941 246 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 CCDC183Q5T5S1 534 aa24.19■■□□□ 1.46
TUBGCP3-204ENST00000464139 SCARF1Q14162 830 aa24.18■■□□□ 1.46
TUBGCP3-204ENST00000464139 FGD1P98174 961 aa24.18■■□□□ 1.46
TUBGCP3-204ENST00000464139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.18■■□□□ 1.46
TUBGCP3-204ENST00000464139 OSBP2Q969R2 916 aa24.18■■□□□ 1.46
TUBGCP3-204ENST00000464139 GREM2Q9H772 168 aa24.18■■□□□ 1.46
TUBGCP3-204ENST00000464139 FBXO3Q9UK99 471 aa24.18■■□□□ 1.46
TUBGCP3-204ENST00000464139 COL14A1Q05707 1796 aaKnown RBP24.17■■□□□ 1.46
TUBGCP3-204ENST00000464139 TTLL11Q8NHH1 800 aa24.17■■□□□ 1.46
TUBGCP3-204ENST00000464139 PDLIM2Q96JY6 352 aa24.17■■□□□ 1.46
TUBGCP3-204ENST00000464139 TBC1D2BQ9UPU7 963 aa24.17■■□□□ 1.46
TUBGCP3-204ENST00000464139 ITGA6P23229 1130 aa24.16■■□□□ 1.46
TUBGCP3-204ENST00000464139 CSPP1Q1MSJ5 1256 aa24.16■■□□□ 1.46
TUBGCP3-204ENST00000464139 PI16Q6UXB8 463 aa24.16■■□□□ 1.46
TUBGCP3-204ENST00000464139 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.16■■□□□ 1.46
TUBGCP3-204ENST00000464139 LAMA4Q16363 1823 aa24.16■■□□□ 1.46
TUBGCP3-204ENST00000464139 LDHAL6AQ6ZMR3 332 aa24.16■■□□□ 1.46
TUBGCP3-204ENST00000464139 DHX32Q7L7V1 743 aaKnown RBP24.16■■□□□ 1.46
TUBGCP3-204ENST00000464139 CDHR2Q9BYE9 1310 aa24.15■■□□□ 1.46
TUBGCP3-204ENST00000464139 METTL24Q5JXM2 366 aa24.15■■□□□ 1.46
TUBGCP3-204ENST00000464139 TTLL5Q6EMB2 1281 aa24.15■■□□□ 1.46
TUBGCP3-204ENST00000464139 TRMT112Q9UI30 125 aaKnown RBP24.15■■□□□ 1.46
TUBGCP3-204ENST00000464139 ZAP70P43403 619 aa24.15■■□□□ 1.46
TUBGCP3-204ENST00000464139 DDX11Q96FC9 970 aa24.15■■□□□ 1.46
TUBGCP3-204ENST00000464139 E7EWF7 191 aa24.14■■□□□ 1.45
TUBGCP3-204ENST00000464139 IRS4O14654 1257 aaPredicted RBP24.14■■□□□ 1.45
TUBGCP3-204ENST00000464139 WASHC4Q2M389 1173 aa24.14■■□□□ 1.45
TUBGCP3-204ENST00000464139 HSP90AB3PQ58FF7 597 aa24.14■■□□□ 1.45
TUBGCP3-204ENST00000464139 TTC6Q86TZ1 520 aa24.14■■□□□ 1.45
TUBGCP3-204ENST00000464139 TICAM2Q86XR7 235 aa24.14■■□□□ 1.45
TUBGCP3-204ENST00000464139 RIPOR2Q9Y4F9 1068 aa24.14■■□□□ 1.45
TUBGCP3-204ENST00000464139 A0A0G2JS52 829 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 HMGB1P09429 215 aaKnown RBP24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 PDIA4P13667 645 aaKnown RBP24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 CTSWP56202 376 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 KRT85P78386 507 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 SCRN1Q12765 414 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 ATP2B3Q16720 1220 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 SPEF2Q9C093 1822 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 LRP6O75581 1613 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 RIC1Q4ADV7 1423 aa24.13■■□□□ 1.45
TUBGCP3-204ENST00000464139 APOBRQ0VD83 1088 aa24.12■■□□□ 1.45
TUBGCP3-204ENST00000464139 CHST3Q7LGC8 479 aa24.12■■□□□ 1.45
TUBGCP3-204ENST00000464139 EXOSC10Q01780 885 aaKnown RBP24.12■■□□□ 1.45
TUBGCP3-204ENST00000464139 DZIP3Q86Y13 1208 aaKnown RBP24.12■■□□□ 1.45
TUBGCP3-204ENST00000464139 CNNM1Q9NRU3 951 aa24.12■■□□□ 1.45
TUBGCP3-204ENST00000464139 TFIP11Q9UBB9 837 aaKnown RBP24.12■■□□□ 1.45
TUBGCP3-204ENST00000464139 ROBO1Q9Y6N7 1651 aa24.12■■□□□ 1.45
TUBGCP3-204ENST00000464139 ANKRD18BA2A2Z9 1011 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms