RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
VAPB-203ENST00000463370 SH3TC1Q8TE82 1336 aa15.41■□□□□ 0.06
VAPB-203ENST00000463370 UTP14AQ9BVJ6 771 aaKnown RBP15.41■□□□□ 0.06
VAPB-203ENST00000463370 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
VAPB-203ENST00000463370 CNNM1Q9NRU3 951 aa15.41■□□□□ 0.06
VAPB-203ENST00000463370 NTSR2O95665 410 aa15.4■□□□□ 0.06
VAPB-203ENST00000463370 ZSWIM6Q9HCJ5 1215 aa15.4■□□□□ 0.06
VAPB-203ENST00000463370 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
VAPB-203ENST00000463370 AKAP2Q9Y2D5 859 aa15.4■□□□□ 0.06
VAPB-203ENST00000463370 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
VAPB-203ENST00000463370 LARGE1O95461 756 aa15.4■□□□□ 0.06
VAPB-203ENST00000463370 FKBP4Q02790 459 aaKnown RBP eCLIP15.4■□□□□ 0.06
VAPB-203ENST00000463370 CHAMP1Q96JM3 812 aa15.4■□□□□ 0.06
VAPB-203ENST00000463370 DTNBO60941 627 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 MCMDC2Q4G0Z9 681 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 TTC39AQ5SRH9 613 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 GORABQ5T7V8 394 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 HELBQ8NG08 1087 aaPredicted RBP15.39■□□□□ 0.05
VAPB-203ENST00000463370 CICQ96RK0 1608 aaPredicted RBP15.39■□□□□ 0.05
VAPB-203ENST00000463370 SNAP23O00161 211 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 TRAK2O60296 914 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
VAPB-203ENST00000463370 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 AMIGO3Q86WK7 504 aa15.39■□□□□ 0.05
VAPB-203ENST00000463370 RPAP1Q9BWH6 1393 aaPredicted RBP15.38■□□□□ 0.05
VAPB-203ENST00000463370 BAG4O95429 457 aaKnown RBP15.38■□□□□ 0.05
VAPB-203ENST00000463370 ZKSCAN1P17029 563 aaPredicted RBP15.38■□□□□ 0.05
VAPB-203ENST00000463370 NUCB2P80303 420 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 CCDC158Q5M9N0 1113 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
VAPB-203ENST00000463370 GBP4Q96PP9 640 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 AFF2P51816 1311 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 DDX11L8A8MPP1 907 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 ZAP70P43403 619 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 FOXD4L5Q5VV16 416 aaPredicted RBP15.38■□□□□ 0.05
VAPB-203ENST00000463370 USPL1Q5W0Q7 1092 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.38■□□□□ 0.05
VAPB-203ENST00000463370 FOXD4L4Q8WXT5 416 aaPredicted RBP15.38■□□□□ 0.05
VAPB-203ENST00000463370 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 TM6SF1Q9BZW5 370 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 PDRG1Q9NUG6 133 aa15.38■□□□□ 0.05
VAPB-203ENST00000463370 THSD7AQ9UPZ6 1657 aa15.37■□□□□ 0.05
VAPB-203ENST00000463370 COL5A3P25940 1745 aaPredicted RBP15.37■□□□□ 0.05
VAPB-203ENST00000463370 PDE8BO95263 885 aa15.37■□□□□ 0.05
VAPB-203ENST00000463370 ZMYM1Q5SVZ6 1142 aa15.37■□□□□ 0.05
VAPB-203ENST00000463370 CLEC17AQ6ZS10 378 aa15.37■□□□□ 0.05
VAPB-203ENST00000463370 INTS4Q96HW7 963 aaKnown RBP15.37■□□□□ 0.05
VAPB-203ENST00000463370 GZF1Q9H116 711 aaPredicted RBP15.37■□□□□ 0.05
VAPB-203ENST00000463370 CYP46A1Q9Y6A2 500 aa15.37■□□□□ 0.05
VAPB-203ENST00000463370 MCAMP43121 646 aa15.36■□□□□ 0.05
VAPB-203ENST00000463370 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
VAPB-203ENST00000463370 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
VAPB-203ENST00000463370 LIMCH1Q9UPQ0 1083 aa15.36■□□□□ 0.05
VAPB-203ENST00000463370 A0A0G2JLW4 131 aa15.36■□□□□ 0.05
VAPB-203ENST00000463370 AK7Q96M32 723 aa15.36■□□□□ 0.05
VAPB-203ENST00000463370 M0R2C6 588 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
VAPB-203ENST00000463370 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 OSBP2Q969R2 916 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 SRP68Q9UHB9 627 aaKnown RBP15.35■□□□□ 0.05
VAPB-203ENST00000463370 MAST3O60307 1309 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 COL4A1P02462 1669 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 LRP5O75197 1615 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 CYP21A2P08686 494 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 ST3GAL1Q11201 340 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 HELLSQ9NRZ9 838 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 CNTNAP4Q9C0A0 1308 aa15.35■□□□□ 0.05
VAPB-203ENST00000463370 ERFEQ4G0M1 354 aa15.34■□□□□ 0.05
VAPB-203ENST00000463370 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
VAPB-203ENST00000463370 FGFR2P21802 821 aa15.34■□□□□ 0.05
VAPB-203ENST00000463370 PHKA1P46020 1223 aa15.34■□□□□ 0.05
VAPB-203ENST00000463370 TBC1D9BQ66K14 1250 aa15.34■□□□□ 0.05
VAPB-203ENST00000463370 CCNL1Q9UK58 526 aaPredicted RBP15.34■□□□□ 0.05
VAPB-203ENST00000463370 TPCN1Q9ULQ1 816 aa15.34■□□□□ 0.05
VAPB-203ENST00000463370 ZNF652Q9Y2D9 606 aa15.34■□□□□ 0.05
VAPB-203ENST00000463370 GNPATO15228 680 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 BRD1O95696 1058 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 ME3Q16798 604 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 TSGA10IPQ3SY00 556 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 CLEC4GQ6UXB4 293 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 RPS6KB1P23443 525 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 CCDC102BQ68D86 513 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 MCTP1Q6DN14 999 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 STOX1Q6ZVD7 989 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 SEPT12Q8IYM1 358 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 HMG20BQ9P0W2 317 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 MYH3P11055 1940 aa15.33■□□□□ 0.04
VAPB-203ENST00000463370 MROH5Q6ZUA9 1318 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 FOXP2O15409 715 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 HSPD1P10809 573 aaKnown RBP15.32■□□□□ 0.04
VAPB-203ENST00000463370 PSMA5P28066 241 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
VAPB-203ENST00000463370 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 CCDC83Q8IWF9 413 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 NECAB1Q8N987 351 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 MPHOSPH8Q99549 860 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms