RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 DDX21Q9NR30 783 aaKnown RBP eCLIP5.09□□□□□ -1.59
ERCC4-203ENST00000462862 NLRP2Q9NX02 1062 aa5.09□□□□□ -1.59
ERCC4-203ENST00000462862 DACH1Q9UI36 760 aa5.09□□□□□ -1.59
ERCC4-203ENST00000462862 LRP6O75581 1613 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 COL22A1Q8NFW1 1626 aaPredicted RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 UTYO14607 1347 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 ELL2O00472 640 aaPredicted RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 WNT7AO00755 349 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 AXIN1O15169 862 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 HOXA2O43364 376 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 DXOO77932 396 aaKnown RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 ATP8B2P98198 1209 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 TRIM32Q13049 653 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 RTL5Q5HYW3 569 aaPredicted RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 ANKRD45Q5TZF3 282 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 ZNF790Q6PG37 636 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 LARP1Q6PKG0 1096 aaKnown RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 KSR2Q6VAB6 950 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 CRIPAKQ8N1N5 446 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 CCDC24Q8N4L8 307 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 KRI1Q8N9T8 703 aaKnown RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 LINS1Q8NG48 757 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 SNX21Q969T3 373 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 GPATCH3Q96I76 525 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 LRRCC1Q9C099 1032 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 GPCPD1Q9NPB8 672 aa5.08□□□□□ -1.6
ERCC4-203ENST00000462862 THRAP3Q9Y2W1 955 aaKnown RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 SIPA1L3O60292 1781 aaPredicted RBP5.08□□□□□ -1.6
ERCC4-203ENST00000462862 SCN11AQ9UI33 1791 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 TTC41PQ6P2S7 1318 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 ERC2O15083 957 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 IL2RBP14784 551 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 CLCN1P35523 988 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 GUCA2AQ02747 115 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 CTC1Q2NKJ3 1217 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.07□□□□□ -1.6
ERCC4-203ENST00000462862 SNIP1Q8TAD8 396 aaKnown RBP5.07□□□□□ -1.6
ERCC4-203ENST00000462862 SSH3Q8TE77 659 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 KIF1BPQ96EK5 621 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 C22orf23Q9BZE7 217 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 LNPKQ9C0E8 428 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 STAP2Q9UGK3 403 aa5.07□□□□□ -1.6
ERCC4-203ENST00000462862 XIRP1Q702N8 1843 aaKnown RBP5.07□□□□□ -1.6
ERCC4-203ENST00000462862 KDM6AO15550 1401 aaPredicted RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 COL14A1Q05707 1796 aaKnown RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 PLCH1Q4KWH8 1693 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 USP42Q9H9J4 1324 aaKnown RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 HIP1O00291 1037 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 PDIA4P13667 645 aaKnown RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 MCCP23508 829 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 MCM2P49736 904 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 SMCPP49901 116 aaPredicted RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 ANAPC15P60006 121 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 ZC3H6P61129 1189 aaKnown RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 BEND3Q5T5X7 828 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 TTC22Q5TAA0 569 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 SLC4A10Q6U841 1118 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 NUTM1Q86Y26 1132 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 HSCBQ8IWL3 235 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 SIRT2Q8IXJ6 389 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 ZCRB1Q8TBF4 217 aaKnown RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 SYMPKQ92797 1274 aaKnown RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 MRGPRX2Q96LB1 330 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 MEIS3Q99687 375 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 FAM217BQ9NTX9 383 aaPredicted RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 GMPR2Q9P2T1 348 aaKnown RBP5.06□□□□□ -1.6
ERCC4-203ENST00000462862 TNNQ9UQP3 1299 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 MEGF6O75095 1541 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 ABCA3Q99758 1704 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 TNS2Q63HR2 1409 aa5.06□□□□□ -1.6
ERCC4-203ENST00000462862 RFX7Q2KHR2 1363 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 ZNF335Q9H4Z2 1342 aaPredicted RBP5.05□□□□□ -1.6
ERCC4-203ENST00000462862 J3QL48 77 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 TOM1O60784 492 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 HSP90B1P14625 803 aaKnown RBP5.05□□□□□ -1.6
ERCC4-203ENST00000462862 SMPD1P17405 629 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 CABP4P57796 275 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 XPCQ01831 940 aaPredicted RBP5.05□□□□□ -1.6
ERCC4-203ENST00000462862 RABEP1Q15276 862 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 MPRIPQ6WCQ1 1025 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 TOM1L2Q6ZVM7 507 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 NPM2Q86SE8 214 aaKnown RBP5.05□□□□□ -1.6
ERCC4-203ENST00000462862 PLEKHM2Q8IWE5 1019 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 USHBP1Q8N6Y0 703 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 RUFY2Q8WXA3 655 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 IL17RAQ96F46 866 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 REPIN1Q9BWE0 567 aaKnown RBP5.05□□□□□ -1.6
ERCC4-203ENST00000462862 USP44Q9H0E7 712 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 CHPF2Q9P2E5 772 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 LAMB4A4D0S4 1761 aa5.05□□□□□ -1.6
ERCC4-203ENST00000462862 RAD50Q92878 1312 aa5.04□□□□□ -1.6
ERCC4-203ENST00000462862 ZBTB7CA1YPR0 619 aa5.04□□□□□ -1.6
ERCC4-203ENST00000462862 PI4KAP2A4QPH2 592 aa5.04□□□□□ -1.6
ERCC4-203ENST00000462862 GLRX3O76003 335 aaKnown RBP5.04□□□□□ -1.6
ERCC4-203ENST00000462862 MX1P20591 662 aa5.04□□□□□ -1.6
ERCC4-203ENST00000462862 SSTR3P32745 418 aaPredicted RBP5.04□□□□□ -1.6
ERCC4-203ENST00000462862 PDE1AP54750 535 aa5.04□□□□□ -1.6
ERCC4-203ENST00000462862 EVA1CP58658 441 aa5.04□□□□□ -1.6
ERCC4-203ENST00000462862 SKOR1P84550 965 aa5.04□□□□□ -1.6
ERCC4-203ENST00000462862 KRT24Q2M2I5 525 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms