RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 NBPF14Q5TI25 921 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 MEI1Q5TIA1 1274 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 MYO1HQ8N1T3 1032 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 DNAJC25Q9H1X3 360 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 MCM8Q9UJA3 840 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 TPX2Q9ULW0 747 aaKnown RBP7.86□□□□□ -1.15
SGCE-209ENST00000462731 EFR3BQ9Y2G0 817 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 A6NJY4 79 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 WIPF1O43516 503 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 MCL1Q07820 350 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 CNGB1Q14028 1251 aaPredicted RBP7.85□□□□□ -1.15
SGCE-209ENST00000462731 MORC3Q14149 939 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 GRAMD1BQ3KR37 738 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 TNNI3KQ59H18 835 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 C10orf62Q5T681 223 aaPredicted RBP7.85□□□□□ -1.15
SGCE-209ENST00000462731 DDX42Q86XP3 938 aaKnown RBP eCLIP7.85□□□□□ -1.15
SGCE-209ENST00000462731 C1orf131Q8NDD1 294 aaKnown RBP7.85□□□□□ -1.15
SGCE-209ENST00000462731 CHAC2Q8WUX2 184 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 LRCH3Q96II8 777 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 COPRSQ9NQ92 184 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
SGCE-209ENST00000462731 LEMD3Q9Y2U8 911 aa7.85□□□□□ -1.15
SGCE-209ENST00000462731 SHTN1A0MZ66 631 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 EIF1AYO14602 144 aaKnown RBP7.84□□□□□ -1.15
SGCE-209ENST00000462731 FAM163BP0C2L3 166 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 TRAPPC10P48553 1259 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 LRRC41Q15345 812 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 PTPRNQ16849 979 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 ACBD5Q5T8D3 534 aaPredicted RBP7.84□□□□□ -1.15
SGCE-209ENST00000462731 TRIM67Q6ZTA4 783 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 DRC7Q8IY82 874 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 JMYQ8N9B5 988 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 TEX19Q8NA77 164 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 NKX2-3Q8TAU0 364 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 THAP3Q8WTV1 239 aaPredicted RBP7.84□□□□□ -1.15
SGCE-209ENST00000462731 SCG3Q8WXD2 468 aaKnown RBP7.84□□□□□ -1.15
SGCE-209ENST00000462731 EMID1Q96A84 441 aaPredicted RBP7.84□□□□□ -1.15
SGCE-209ENST00000462731 GINM1Q9NU53 330 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 KBTBD4Q9NVX7 518 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 ZNF358Q9NW07 568 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 CDV3Q9UKY7 258 aaKnown RBP7.84□□□□□ -1.15
SGCE-209ENST00000462731 INTUQ9ULD6 942 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 POLIQ9UNA4 740 aa7.84□□□□□ -1.15
SGCE-209ENST00000462731 OPLAHO14841 1288 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 PDPK1O15530 556 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 RASGRP1O95267 797 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 STAT3P40763 770 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 DZIP3Q86Y13 1208 aaKnown RBP7.83□□□□□ -1.16
SGCE-209ENST00000462731 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
SGCE-209ENST00000462731 TTC8Q8TAM2 541 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 E2F7Q96AV8 911 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 ARHGAP9Q9BRR9 750 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 FAM126AQ9BYI3 521 aaPredicted RBP7.83□□□□□ -1.16
SGCE-209ENST00000462731 IL21Q9HBE4 155 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 FAM8A1Q9UBU6 413 aa7.83□□□□□ -1.16
SGCE-209ENST00000462731 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 SMAPO00193 183 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 WASLO00401 505 aaPredicted RBP7.82□□□□□ -1.16
SGCE-209ENST00000462731 ZRANB2O95218 330 aaKnown RBP eCLIP7.82□□□□□ -1.16
SGCE-209ENST00000462731 LDHCP07864 332 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 PDE6BP35913 854 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 KCTD2Q14681 263 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 FAM98CQ17RN3 349 aaKnown RBP7.82□□□□□ -1.16
SGCE-209ENST00000462731 COX20Q5RI15 118 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 SWT1Q5T5J6 900 aaKnown RBP7.82□□□□□ -1.16
SGCE-209ENST00000462731 C14orf80Q86SX3 495 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 THNSL2Q86YJ6 484 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 CHPFQ8IZ52 775 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 MYRIPQ8NFW9 859 aa7.82□□□□□ -1.16
SGCE-209ENST00000462731 MRPS23Q9Y3D9 190 aaKnown RBP7.82□□□□□ -1.16
SGCE-209ENST00000462731 CFHP08603 1231 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 ORC1Q13415 861 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 PWP1Q13610 501 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 SUZ12Q15022 739 aaKnown RBP7.81□□□□□ -1.16
SGCE-209ENST00000462731 DDR2Q16832 855 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 NBPF20Q3BBV1 942 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.81□□□□□ -1.16
SGCE-209ENST00000462731 TM4SF20Q53R12 229 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 AXDND1Q5T1B0 1012 aaPredicted RBP7.81□□□□□ -1.16
SGCE-209ENST00000462731 KSR2Q6VAB6 950 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 CPLX3Q8WVH0 158 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 ANAPC16Q96DE5 110 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 MTRQ99707 1265 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
SGCE-209ENST00000462731 RBSNQ9H1K0 784 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 CAAP1Q9H8G2 361 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 ADAMTS1Q9UHI8 967 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 KLF15Q9UIH9 416 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 ATAD2Q6PL18 1390 aa7.81□□□□□ -1.16
SGCE-209ENST00000462731 SOX5P35711 763 aa7.8□□□□□ -1.16
SGCE-209ENST00000462731 CASP2P42575 452 aa7.8□□□□□ -1.16
SGCE-209ENST00000462731 ZBTB33Q86T24 672 aa7.8□□□□□ -1.16
SGCE-209ENST00000462731 SPICE1Q8N0Z3 855 aa7.8□□□□□ -1.16
SGCE-209ENST00000462731 MFSD3Q96ES6 412 aa7.8□□□□□ -1.16
SGCE-209ENST00000462731 RSRP1Q9BUV0 290 aa7.8□□□□□ -1.16
SGCE-209ENST00000462731 OSBPL7Q9BZF2 842 aa7.8□□□□□ -1.16
SGCE-209ENST00000462731 ASMTLO95671 621 aa7.79□□□□□ -1.16
SGCE-209ENST00000462731 MYL3P08590 195 aa7.79□□□□□ -1.16
SGCE-209ENST00000462731 VDRP11473 427 aa7.79□□□□□ -1.16
SGCE-209ENST00000462731 RAB27AP51159 221 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms