RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 KANSL3Q9P2N6 904 aa11.95□□□□□ -0.5
COL4A2-203ENST00000462309 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.95□□□□□ -0.5
COL4A2-203ENST00000462309 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
COL4A2-203ENST00000462309 SOX18P35713 384 aa11.94□□□□□ -0.5
COL4A2-203ENST00000462309 SPEM2Q0P670 501 aa11.94□□□□□ -0.5
COL4A2-203ENST00000462309 DRC1Q96MC2 740 aa11.94□□□□□ -0.5
COL4A2-203ENST00000462309 SLC30A3Q99726 388 aa11.94□□□□□ -0.5
COL4A2-203ENST00000462309 PHF20L1A8MW92 1017 aa11.93□□□□□ -0.5
COL4A2-203ENST00000462309 KIF4AO95239 1232 aa11.93□□□□□ -0.5
COL4A2-203ENST00000462309 NFKB1P19838 968 aa11.93□□□□□ -0.5
COL4A2-203ENST00000462309 ITGA6P23229 1130 aa11.93□□□□□ -0.5
COL4A2-203ENST00000462309 ZNF837Q96EG3 531 aaPredicted RBP11.93□□□□□ -0.5
COL4A2-203ENST00000462309 ABHD17AQ96GS6 310 aa11.93□□□□□ -0.5
COL4A2-203ENST00000462309 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
COL4A2-203ENST00000462309 FAM182BQ5T319 152 aa11.92□□□□□ -0.5
COL4A2-203ENST00000462309 PNMA5Q96PV4 448 aa11.92□□□□□ -0.5
COL4A2-203ENST00000462309 EHD4Q9H223 541 aa11.92□□□□□ -0.5
COL4A2-203ENST00000462309 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
COL4A2-203ENST00000462309 DDX41Q9UJV9 622 aaKnown RBP11.92□□□□□ -0.5
COL4A2-203ENST00000462309 ATXN7L1Q9ULK2 861 aaPredicted RBP11.92□□□□□ -0.5
COL4A2-203ENST00000462309 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
COL4A2-203ENST00000462309 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.92□□□□□ -0.5
COL4A2-203ENST00000462309 PSAPP07602 524 aa11.91□□□□□ -0.5
COL4A2-203ENST00000462309 COL13A1Q5TAT6 717 aaPredicted RBP11.91□□□□□ -0.5
COL4A2-203ENST00000462309 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
COL4A2-203ENST00000462309 C3orf58Q8NDZ4 430 aa11.91□□□□□ -0.5
COL4A2-203ENST00000462309 TINF2Q9BSI4 451 aa11.91□□□□□ -0.5
COL4A2-203ENST00000462309 CD33P20138 364 aa11.9□□□□□ -0.5
COL4A2-203ENST00000462309 GSTT1P30711 240 aa11.9□□□□□ -0.5
COL4A2-203ENST00000462309 HS2ST1Q7LGA3 356 aa11.9□□□□□ -0.5
COL4A2-203ENST00000462309 SLC43A3Q8NBI5 491 aa11.9□□□□□ -0.5
COL4A2-203ENST00000462309 GTPBP3Q969Y2 492 aaKnown RBP11.9□□□□□ -0.5
COL4A2-203ENST00000462309 CCSER2Q9H7U1 834 aa11.9□□□□□ -0.5
COL4A2-203ENST00000462309 SRA1Q9HD15 236 aaKnown RBP11.9□□□□□ -0.5
COL4A2-203ENST00000462309 RACK1P63244 317 aaKnown RBP11.89□□□□□ -0.51
COL4A2-203ENST00000462309 HYAL2Q12891 473 aa11.89□□□□□ -0.51
COL4A2-203ENST00000462309 BHMTQ93088 406 aa11.89□□□□□ -0.51
COL4A2-203ENST00000462309 TCF12Q99081 682 aa11.89□□□□□ -0.51
COL4A2-203ENST00000462309 ACBD3Q9H3P7 528 aa11.89□□□□□ -0.51
COL4A2-203ENST00000462309 PLAURQ03405 335 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 ZNF394Q53GI3 561 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 DHX32Q7L7V1 743 aaKnown RBP11.88□□□□□ -0.51
COL4A2-203ENST00000462309 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 CEP120Q8N960 986 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 ANKRD24Q8TF21 1146 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 CNTNAP3BQ96NU0 1288 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 CNTNAP3Q9BZ76 1288 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 GMPR2Q9P2T1 348 aaKnown RBP11.88□□□□□ -0.51
COL4A2-203ENST00000462309 GGT7Q9UJ14 662 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 SHROOM4Q9ULL8 1493 aa11.88□□□□□ -0.51
COL4A2-203ENST00000462309 FGFR3P22607 806 aa11.87□□□□□ -0.51
COL4A2-203ENST00000462309 SF3A1Q15459 793 aaKnown RBP11.87□□□□□ -0.51
COL4A2-203ENST00000462309 ERMP1Q7Z2K6 904 aa11.87□□□□□ -0.51
COL4A2-203ENST00000462309 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
COL4A2-203ENST00000462309 PHF24Q9UPV7 400 aa11.87□□□□□ -0.51
COL4A2-203ENST00000462309 TMEM238LA0A1B0GVL6 79 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 XRCC5P13010 732 aaKnown RBP11.86□□□□□ -0.51
COL4A2-203ENST00000462309 NRLP54845 237 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 NCAPG2Q86XI2 1143 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 CCNJLQ8IV13 435 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 OSMRQ99650 979 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 NOC4LQ9BVI4 516 aaKnown RBP11.86□□□□□ -0.51
COL4A2-203ENST00000462309 LIN7BQ9HAP6 207 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 ABCB6Q9NP58 842 aa11.86□□□□□ -0.51
COL4A2-203ENST00000462309 SNRPBP14678 240 aaKnown RBP11.85□□□□□ -0.51
COL4A2-203ENST00000462309 ACPPP15309 386 aa11.85□□□□□ -0.51
COL4A2-203ENST00000462309 CTBSQ01459 385 aa11.85□□□□□ -0.51
COL4A2-203ENST00000462309 RAB44Q7Z6P3 723 aaPredicted RBP11.85□□□□□ -0.51
COL4A2-203ENST00000462309 CAPN10Q9HC96 672 aa11.85□□□□□ -0.51
COL4A2-203ENST00000462309 DZANK1Q9NVP4 752 aa11.85□□□□□ -0.51
COL4A2-203ENST00000462309 PCDHGB7Q9Y5F8 929 aa11.85□□□□□ -0.51
COL4A2-203ENST00000462309 ZBTB42B2RXF5 422 aa11.84□□□□□ -0.51
COL4A2-203ENST00000462309 NFKBIEO00221 500 aa11.84□□□□□ -0.51
COL4A2-203ENST00000462309 TNNI2P48788 182 aa11.84□□□□□ -0.51
COL4A2-203ENST00000462309 FCGRTP55899 365 aa11.84□□□□□ -0.51
COL4A2-203ENST00000462309 MAP3K10Q02779 954 aa11.84□□□□□ -0.51
COL4A2-203ENST00000462309 TRPM4Q8TD43 1214 aa11.84□□□□□ -0.51
COL4A2-203ENST00000462309 PPM1HQ9ULR3 514 aa11.84□□□□□ -0.51
COL4A2-203ENST00000462309 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
COL4A2-203ENST00000462309 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
COL4A2-203ENST00000462309 RSRP1Q9BUV0 290 aa11.83□□□□□ -0.52
COL4A2-203ENST00000462309 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
COL4A2-203ENST00000462309 LOC102724428A0A0B4J2F2 783 aa11.82□□□□□ -0.52
COL4A2-203ENST00000462309 SIK1P57059 783 aa11.82□□□□□ -0.52
COL4A2-203ENST00000462309 GPLD1P80108 840 aa11.82□□□□□ -0.52
COL4A2-203ENST00000462309 GMLQ99445 158 aa11.82□□□□□ -0.52
COL4A2-203ENST00000462309 COPRSQ9NQ92 184 aa11.82□□□□□ -0.52
COL4A2-203ENST00000462309 TTF2Q9UNY4 1162 aaKnown RBP11.82□□□□□ -0.52
COL4A2-203ENST00000462309 TRPA1O75762 1119 aa11.81□□□□□ -0.52
COL4A2-203ENST00000462309 FOXR1Q6PIV2 292 aa11.81□□□□□ -0.52
COL4A2-203ENST00000462309 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
COL4A2-203ENST00000462309 NSUN5Q96P11 429 aaKnown RBP11.81□□□□□ -0.52
COL4A2-203ENST00000462309 TRERF1Q96PN7 1200 aa11.81□□□□□ -0.52
COL4A2-203ENST00000462309 BHLHE41Q9C0J9 482 aaPredicted RBP11.81□□□□□ -0.52
COL4A2-203ENST00000462309 ITPKAP23677 461 aa11.8□□□□□ -0.52
COL4A2-203ENST00000462309 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
COL4A2-203ENST00000462309 DTHD1Q6ZMT9 781 aa11.8□□□□□ -0.52
COL4A2-203ENST00000462309 VWA5B2Q8N398 1253 aa11.8□□□□□ -0.52
COL4A2-203ENST00000462309 TMEM102Q8N9M5 508 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms