RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 DDX11L8A8MPP1 907 aa7.15□□□□□ -1.27
CLK1-207ENST00000461981 HOXB7P09629 217 aa7.15□□□□□ -1.27
CLK1-207ENST00000461981 TNNT1P13805 278 aa7.15□□□□□ -1.27
CLK1-207ENST00000461981 KCNQ4P56696 695 aa7.15□□□□□ -1.27
CLK1-207ENST00000461981 HSP90AB3PQ58FF7 597 aa7.15□□□□□ -1.27
CLK1-207ENST00000461981 CT47A1Q5JQC4 288 aaPredicted RBP7.15□□□□□ -1.27
CLK1-207ENST00000461981 CNBD1Q8NA66 436 aa7.15□□□□□ -1.27
CLK1-207ENST00000461981 SETDB2Q96T68 719 aa7.15□□□□□ -1.27
CLK1-207ENST00000461981 ZNF592Q92610 1267 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 ZNF496Q96IT1 587 aaPredicted RBP7.14□□□□□ -1.27
CLK1-207ENST00000461981 EP400Q96L91 3159 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 DLG5Q8TDM6 1919 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 TEFQ10587 303 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 TPTE2Q6XPS3 522 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 GPATCH11Q8N954 259 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 PLCD4Q9BRC7 762 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 UPF2Q9HAU5 1272 aaKnown RBP7.14□□□□□ -1.27
CLK1-207ENST00000461981 WWC3Q9ULE0 1092 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 ZBTB1Q9Y2K1 713 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 PAPPA2Q9BXP8 1791 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 IRF6O14896 467 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 SRP68Q9UHB9 627 aaKnown RBP7.14□□□□□ -1.27
CLK1-207ENST00000461981 ZKSCAN5Q9Y2L8 839 aa7.14□□□□□ -1.27
CLK1-207ENST00000461981 ITGBL1O95965 494 aaPredicted RBP7.13□□□□□ -1.27
CLK1-207ENST00000461981 GTF2A1P52655 376 aaPredicted RBP7.13□□□□□ -1.27
CLK1-207ENST00000461981 MTHFSDQ2M296 383 aaKnown RBP7.13□□□□□ -1.27
CLK1-207ENST00000461981 CFHR5Q9BXR6 569 aa7.13□□□□□ -1.27
CLK1-207ENST00000461981 TULP2O00295 520 aa7.13□□□□□ -1.27
CLK1-207ENST00000461981 RPS12P25398 132 aaKnown RBP7.13□□□□□ -1.27
CLK1-207ENST00000461981 IARSP41252 1262 aaKnown RBP7.13□□□□□ -1.27
CLK1-207ENST00000461981 OS9Q13438 667 aaPredicted RBP7.13□□□□□ -1.27
CLK1-207ENST00000461981 CENPQQ7L2Z9 268 aaPredicted RBP7.13□□□□□ -1.27
CLK1-207ENST00000461981 TOMM22Q9NS69 142 aa7.13□□□□□ -1.27
CLK1-207ENST00000461981 CHMP5Q9NZZ3 219 aa7.13□□□□□ -1.27
CLK1-207ENST00000461981 RSPH14Q9UHP6 348 aa7.13□□□□□ -1.27
CLK1-207ENST00000461981 TLL2Q9Y6L7 1015 aa7.13□□□□□ -1.27
CLK1-207ENST00000461981 HSPA8P11142 646 aaKnown RBP7.12□□□□□ -1.27
CLK1-207ENST00000461981 FKBP1BP68106 108 aa7.12□□□□□ -1.27
CLK1-207ENST00000461981 FEZ2Q9UHY8 353 aaPredicted RBP7.12□□□□□ -1.27
CLK1-207ENST00000461981 BRPF1P55201 1214 aaPredicted RBP7.12□□□□□ -1.27
CLK1-207ENST00000461981 RBM17Q96I25 401 aaKnown RBP7.12□□□□□ -1.27
CLK1-207ENST00000461981 ERFEQ4G0M1 354 aa7.12□□□□□ -1.27
CLK1-207ENST00000461981 PRPF40BQ6NWY9 871 aaKnown RBP7.12□□□□□ -1.27
CLK1-207ENST00000461981 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
CLK1-207ENST00000461981 SLFN14P0C7P3 912 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 EIF6P56537 245 aaKnown RBP7.11□□□□□ -1.27
CLK1-207ENST00000461981 SEMA3FQ13275 785 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 TBC1D9BQ66K14 1250 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 MAP3K15Q6ZN16 1313 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 BBOX1O75936 387 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 CHRNA5P30532 468 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 PKN2Q16513 984 aaKnown RBP7.11□□□□□ -1.27
CLK1-207ENST00000461981 DZIP3Q86Y13 1208 aaKnown RBP7.11□□□□□ -1.27
CLK1-207ENST00000461981 MYCBPQ99417 103 aaPredicted RBP7.11□□□□□ -1.27
CLK1-207ENST00000461981 CALCOCO1Q9P1Z2 691 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 PITPNM2Q9BZ72 1349 aa7.11□□□□□ -1.27
CLK1-207ENST00000461981 FBLN1P23142 703 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 LMOD1P29536 600 aaPredicted RBP7.1□□□□□ -1.27
CLK1-207ENST00000461981 RASSF7Q02833 373 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 DPF2Q92785 391 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 ADARB2Q9NS39 739 aaKnown RBP7.1□□□□□ -1.27
CLK1-207ENST00000461981 GOLIM4O00461 696 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 EPHX2P34913 555 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 TNIP1Q15025 636 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 TAF7Q15545 349 aaPredicted RBP7.1□□□□□ -1.27
CLK1-207ENST00000461981 PPP1R42Q7Z4L9 355 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 ZNF34Q8IZ26 560 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 IL17REQ8NFR9 667 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 TSPYL1Q9H0U9 437 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 EFCC1Q9HA90 598 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 ZNF646O15015 1829 aaPredicted RBP7.1□□□□□ -1.27
CLK1-207ENST00000461981 MCCP23508 829 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 GABPB1Q06547 395 aaPredicted RBP7.1□□□□□ -1.27
CLK1-207ENST00000461981 HS1BP3Q53T59 392 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 SP8Q8IXZ3 490 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 CDCA7LQ96GN5 454 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 SMC4Q9NTJ3 1288 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 CEP83Q9Y592 693 aa7.1□□□□□ -1.27
CLK1-207ENST00000461981 RTL9Q8NET4 1388 aa7.09□□□□□ -1.27
CLK1-207ENST00000461981 ECM29Q5VYK3 1845 aa7.09□□□□□ -1.27
CLK1-207ENST00000461981 DEFB115Q30KQ5 88 aa7.09□□□□□ -1.27
CLK1-207ENST00000461981 WDR33Q9C0J8 1336 aaKnown RBP7.09□□□□□ -1.27
CLK1-207ENST00000461981 TRIM28Q13263 835 aaKnown RBP7.09□□□□□ -1.27
CLK1-207ENST00000461981 LGR6Q9HBX8 967 aa7.09□□□□□ -1.27
CLK1-207ENST00000461981 SH3BP1Q9Y3L3 701 aa7.09□□□□□ -1.27
CLK1-207ENST00000461981 PTCD1O75127 700 aaKnown RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 GYS2P54840 703 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 KIAA2012Q0VF49 1180 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 DNAJC21Q5F1R6 531 aaKnown RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 SYNE4Q8N205 404 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 RNF217Q8TC41 542 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 TMX4Q9H1E5 349 aaPredicted RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 OGFRQ9NZT2 677 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 CACNA1FO60840 1977 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 BTBD11A6QL63 1104 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 HMGN5P82970 282 aaKnown RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 KIF6Q6ZMV9 814 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 NBPF5PQ86XG9 351 aaPredicted RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 JDP2Q8WYK2 163 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms