RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 SEC31BQ9NQW1 1179 aa30.7■■■□□ 2.51
CDH23-208ENST00000461841 SRP68Q9UHB9 627 aaKnown RBP30.7■■■□□ 2.51
CDH23-208ENST00000461841 GOLIM4O00461 696 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 HSP90AA1P07900 732 aaKnown RBP30.69■■■□□ 2.5
CDH23-208ENST00000461841 CHMP5Q9NZZ3 219 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 SNX14Q9Y5W7 946 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 MED23Q9ULK4 1368 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 LRP5O75197 1615 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 PDE8BO95263 885 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 FAM196AQ6ZSG2 479 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 KRT27Q7Z3Y8 459 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 RASEFQ8IZ41 740 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 RTL9Q8NET4 1388 aa30.69■■■□□ 2.5
CDH23-208ENST00000461841 LAMB2P55268 1798 aa30.68■■■□□ 2.5
CDH23-208ENST00000461841 BICDL1Q6ZP65 573 aa30.68■■■□□ 2.5
CDH23-208ENST00000461841 ZPR1O75312 459 aa30.68■■■□□ 2.5
CDH23-208ENST00000461841 ERFEQ4G0M1 354 aa30.68■■■□□ 2.5
CDH23-208ENST00000461841 ARHGEF1Q92888 912 aaKnown RBP30.68■■■□□ 2.5
CDH23-208ENST00000461841 MAP4K1Q92918 833 aa30.68■■■□□ 2.5
CDH23-208ENST00000461841 LRRC4BQ9NT99 713 aa30.68■■■□□ 2.5
CDH23-208ENST00000461841 CHGBP05060 677 aa30.67■■■□□ 2.5
CDH23-208ENST00000461841 MROH5Q6ZUA9 1318 aa30.66■■■□□ 2.5
CDH23-208ENST00000461841 TTC39AQ5SRH9 613 aa30.66■■■□□ 2.5
CDH23-208ENST00000461841 ZNF589Q86UQ0 364 aaPredicted RBP30.66■■■□□ 2.5
CDH23-208ENST00000461841 NECTIN1Q15223 517 aa30.66■■■□□ 2.5
CDH23-208ENST00000461841 TICAM2Q86XR7 235 aa30.66■■■□□ 2.5
CDH23-208ENST00000461841 UPF3BQ9BZI7 483 aaKnown RBP30.66■■■□□ 2.5
CDH23-208ENST00000461841 FOXD4L1Q9NU39 408 aa30.66■■■□□ 2.5
CDH23-208ENST00000461841 BRWD3Q6RI45 1802 aa30.66■■■□□ 2.5
CDH23-208ENST00000461841 C4BP0C0L5 1744 aa30.65■■■□□ 2.5
CDH23-208ENST00000461841 KCNB2Q92953 911 aa30.64■■■□□ 2.5
CDH23-208ENST00000461841 MPHOSPH8Q99549 860 aa30.64■■■□□ 2.5
CDH23-208ENST00000461841 FRAT2O75474 233 aaPredicted RBP30.63■■■□□ 2.49
CDH23-208ENST00000461841 PRPF40BQ6NWY9 871 aaKnown RBP30.63■■■□□ 2.49
CDH23-208ENST00000461841 SETDB2Q96T68 719 aa30.63■■■□□ 2.49
CDH23-208ENST00000461841 RBM8AQ9Y5S9 174 aaKnown RBP30.63■■■□□ 2.49
CDH23-208ENST00000461841 FKBP4Q02790 459 aaKnown RBP eCLIP30.63■■■□□ 2.49
CDH23-208ENST00000461841 HELBQ8NG08 1087 aaPredicted RBP30.63■■■□□ 2.49
CDH23-208ENST00000461841 ABCC12Q96J65 1359 aa30.62■■■□□ 2.49
CDH23-208ENST00000461841 SPEF2Q9C093 1822 aa30.62■■■□□ 2.49
CDH23-208ENST00000461841 MCM2P49736 904 aa30.62■■■□□ 2.49
CDH23-208ENST00000461841 SCARF1Q14162 830 aa30.62■■■□□ 2.49
CDH23-208ENST00000461841 IL27Q8NEV9 243 aa30.62■■■□□ 2.49
CDH23-208ENST00000461841 TAF5LO75529 589 aa30.61■■■□□ 2.49
CDH23-208ENST00000461841 MCMDC2Q4G0Z9 681 aa30.61■■■□□ 2.49
CDH23-208ENST00000461841 SLC10A5Q5PT55 438 aa30.61■■■□□ 2.49
CDH23-208ENST00000461841 TRAPPC3LQ5T215 181 aa30.61■■■□□ 2.49
CDH23-208ENST00000461841 C3orf67Q6ZVT6 689 aa30.61■■■□□ 2.49
CDH23-208ENST00000461841 SEC62Q99442 399 aaKnown RBP30.61■■■□□ 2.49
CDH23-208ENST00000461841 FGFR2P21802 821 aa30.61■■■□□ 2.49
CDH23-208ENST00000461841 SF3B3Q15393 1217 aaKnown RBP30.61■■■□□ 2.49
CDH23-208ENST00000461841 PUM3Q15397 648 aaKnown RBP30.61■■■□□ 2.49
CDH23-208ENST00000461841 CIZ1Q9ULV3 898 aaPredicted RBP30.61■■■□□ 2.49
CDH23-208ENST00000461841 TRIM37O94972 964 aa30.6■■■□□ 2.49
CDH23-208ENST00000461841 IGHMBP2P38935 993 aaKnown RBP30.6■■■□□ 2.49
CDH23-208ENST00000461841 GTF2E1P29083 439 aaPredicted RBP30.59■■■□□ 2.49
CDH23-208ENST00000461841 KCNJ4P48050 445 aa30.59■■■□□ 2.49
CDH23-208ENST00000461841 LPIN2Q92539 896 aa30.59■■■□□ 2.49
CDH23-208ENST00000461841 ZNF512BQ96KM6 892 aaPredicted RBP30.59■■■□□ 2.49
CDH23-208ENST00000461841 NYXQ9GZU5 481 aa30.59■■■□□ 2.49
CDH23-208ENST00000461841 PHF14O94880 888 aa30.59■■■□□ 2.49
CDH23-208ENST00000461841 RFC4P35249 363 aa30.59■■■□□ 2.49
CDH23-208ENST00000461841 CREB3L3Q68CJ9 461 aa30.59■■■□□ 2.49
CDH23-208ENST00000461841 RBM6P78332 1123 aaKnown RBP30.57■■■□□ 2.49
CDH23-208ENST00000461841 SLFNL1Q499Z3 407 aa30.57■■■□□ 2.49
CDH23-208ENST00000461841 ZNF772Q68DY9 489 aaPredicted RBP30.57■■■□□ 2.49
CDH23-208ENST00000461841 NBPF5PQ86XG9 351 aaPredicted RBP30.57■■■□□ 2.49
CDH23-208ENST00000461841 TMX3Q96JJ7 454 aa30.57■■■□□ 2.49
CDH23-208ENST00000461841 ZAP70P43403 619 aa30.57■■■□□ 2.48
CDH23-208ENST00000461841 CCDC129Q6ZRS4 1044 aa30.57■■■□□ 2.48
CDH23-208ENST00000461841 HELLSQ9NRZ9 838 aa30.57■■■□□ 2.48
CDH23-208ENST00000461841 RNF113AO15541 343 aaKnown RBP30.56■■■□□ 2.48
CDH23-208ENST00000461841 ZKSCAN1P17029 563 aaPredicted RBP30.56■■■□□ 2.48
CDH23-208ENST00000461841 MCAMP43121 646 aa30.56■■■□□ 2.48
CDH23-208ENST00000461841 ADCK5Q3MIX3 580 aa30.56■■■□□ 2.48
CDH23-208ENST00000461841 SLC27A3Q5K4L6 730 aa30.56■■■□□ 2.48
CDH23-208ENST00000461841 ZMYM1Q5SVZ6 1142 aa30.56■■■□□ 2.48
CDH23-208ENST00000461841 PI16Q6UXB8 463 aa30.56■■■□□ 2.48
CDH23-208ENST00000461841 CDC5LQ99459 802 aaKnown RBP30.56■■■□□ 2.48
CDH23-208ENST00000461841 C4AP0C0L4 1744 aa30.56■■■□□ 2.48
CDH23-208ENST00000461841 COL24A1Q17RW2 1714 aa30.56■■■□□ 2.48
CDH23-208ENST00000461841 COL4A1P02462 1669 aa30.55■■■□□ 2.48
CDH23-208ENST00000461841 SLC27A2O14975 620 aa30.55■■■□□ 2.48
CDH23-208ENST00000461841 SSFA2P28290 1259 aa30.55■■■□□ 2.48
CDH23-208ENST00000461841 CCDC102BQ68D86 513 aa30.55■■■□□ 2.48
CDH23-208ENST00000461841 TPTE2Q6XPS3 522 aa30.55■■■□□ 2.48
CDH23-208ENST00000461841 TTC14Q96N46 770 aa30.55■■■□□ 2.48
CDH23-208ENST00000461841 TM6SF1Q9BZW5 370 aa30.54■■■□□ 2.48
CDH23-208ENST00000461841 SNAP23O00161 211 aa30.54■■■□□ 2.48
CDH23-208ENST00000461841 CASTP20810 708 aaKnown RBP30.54■■■□□ 2.48
CDH23-208ENST00000461841 AKAP11Q9UKA4 1901 aa30.53■■■□□ 2.48
CDH23-208ENST00000461841 ADRA2BP18089 450 aa30.53■■■□□ 2.48
CDH23-208ENST00000461841 PHKA1P46020 1223 aa30.53■■■□□ 2.48
CDH23-208ENST00000461841 SLC5A1P13866 664 aa30.52■■■□□ 2.48
CDH23-208ENST00000461841 RNF20Q5VTR2 975 aa30.52■■■□□ 2.48
CDH23-208ENST00000461841 JAKMIP1Q96N16 626 aaKnown RBP30.52■■■□□ 2.48
CDH23-208ENST00000461841 ZSWIM6Q9HCJ5 1215 aa30.52■■■□□ 2.48
CDH23-208ENST00000461841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.52■■■□□ 2.48
CDH23-208ENST00000461841 ARID4AP29374 1257 aaPredicted RBP30.52■■■□□ 2.48
CDH23-208ENST00000461841 CHRNDQ07001 517 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms