RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
COPS7B-217ENST00000461350 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
COPS7B-217ENST00000461350 HCLS1P14317 486 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-217ENST00000461350 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 MAP7D2Q96T17 732 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 GREM2Q9H772 168 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
COPS7B-217ENST00000461350 NDUFB9Q9Y6M9 179 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 AMIGO3Q86WK7 504 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 SYAP1Q96A49 352 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-217ENST00000461350 DBNDD2Q9BQY9 259 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 NHSQ6T4R5 1651 aa13.41□□□□□ -0.26
COPS7B-217ENST00000461350 MCM2P49736 904 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 TIMM10P62072 90 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 NEUROD6Q96NK8 337 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 SBF2Q86WG5 1849 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 EYA2O00167 538 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 GNPATO15228 680 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 BRD1O95696 1058 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 DNTTIP2Q5QJE6 756 aaKnown RBP13.4□□□□□ -0.26
COPS7B-217ENST00000461350 BICDL1Q6ZP65 573 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 EDC3Q96F86 508 aaKnown RBP13.4□□□□□ -0.26
COPS7B-217ENST00000461350 GDPD2Q9HCC8 539 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 RREB1Q92766 1687 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 CTSWP56202 376 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
COPS7B-217ENST00000461350 MPNDQ8N594 471 aa13.4□□□□□ -0.26
COPS7B-217ENST00000461350 CSF1RP07333 972 aa13.39□□□□□ -0.27
COPS7B-217ENST00000461350 PLA2G12BQ9BX93 195 aa13.39□□□□□ -0.27
COPS7B-217ENST00000461350 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
COPS7B-217ENST00000461350 SRP68Q9UHB9 627 aaKnown RBP13.39□□□□□ -0.27
COPS7B-217ENST00000461350 PALD1Q9ULE6 856 aa13.39□□□□□ -0.27
COPS7B-217ENST00000461350 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
COPS7B-217ENST00000461350 ITGA6P23229 1130 aa13.39□□□□□ -0.27
COPS7B-217ENST00000461350 IL15P40933 162 aaPredicted RBP13.38□□□□□ -0.27
COPS7B-217ENST00000461350 CWC27Q6UX04 472 aaKnown RBP13.38□□□□□ -0.27
COPS7B-217ENST00000461350 CICQ96RK0 1608 aaPredicted RBP13.38□□□□□ -0.27
COPS7B-217ENST00000461350 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
COPS7B-217ENST00000461350 UTP14AQ9BVJ6 771 aaKnown RBP13.38□□□□□ -0.27
COPS7B-217ENST00000461350 BRWD3Q6RI45 1802 aa13.38□□□□□ -0.27
COPS7B-217ENST00000461350 TRIM37O94972 964 aa13.38□□□□□ -0.27
COPS7B-217ENST00000461350 SH3TC1Q8TE82 1336 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 DYNC1I1O14576 645 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 PHF14O94880 888 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 KIAA2012Q0VF49 1180 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 MYH3P11055 1940 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 PDE8AO60658 829 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 USPL1Q5W0Q7 1092 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 LRRC4BQ9NT99 713 aa13.37□□□□□ -0.27
COPS7B-217ENST00000461350 CUL4AQ13619 759 aa13.36□□□□□ -0.27
COPS7B-217ENST00000461350 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
COPS7B-217ENST00000461350 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
COPS7B-217ENST00000461350 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-217ENST00000461350 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.36□□□□□ -0.278e-7■□□□□ 9.2
COPS7B-217ENST00000461350 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
COPS7B-217ENST00000461350 GADD45BO75293 160 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-217ENST00000461350 NTSR2O95665 410 aa13.36□□□□□ -0.27
COPS7B-217ENST00000461350 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
COPS7B-217ENST00000461350 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
COPS7B-217ENST00000461350 ANKRD18BA2A2Z9 1011 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 CIAO1O76071 339 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 INTS4Q96HW7 963 aaKnown RBP13.35□□□□□ -0.27
COPS7B-217ENST00000461350 BCL2L12Q9HB09 334 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 CHGBP05060 677 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
COPS7B-217ENST00000461350 ADORA1P30542 326 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 PARP10Q53GL7 1025 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 FAM196AQ6ZSG2 479 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 CCDC24Q8N4L8 307 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 FSD1Q9BTV5 496 aa13.35□□□□□ -0.27
COPS7B-217ENST00000461350 ATP5JP18859 108 aa13.34□□□□□ -0.27
COPS7B-217ENST00000461350 MTERF4Q7Z6M4 381 aaKnown RBP13.34□□□□□ -0.27
COPS7B-217ENST00000461350 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
COPS7B-217ENST00000461350 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
COPS7B-217ENST00000461350 FAM227BQ96M60 508 aa13.34□□□□□ -0.27
COPS7B-217ENST00000461350 SGSM2O43147 1006 aa13.34□□□□□ -0.27
COPS7B-217ENST00000461350 ANAPC15P60006 121 aa13.34□□□□□ -0.27
COPS7B-217ENST00000461350 METTL24Q5JXM2 366 aa13.34□□□□□ -0.27
COPS7B-217ENST00000461350 RC3H1Q5TC82 1133 aaKnown RBP13.34□□□□□ -0.27
COPS7B-217ENST00000461350 HELBQ8NG08 1087 aaPredicted RBP13.34□□□□□ -0.27
COPS7B-217ENST00000461350 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
COPS7B-217ENST00000461350 USP25Q9UHP3 1055 aa13.34□□□□□ -0.27
COPS7B-217ENST00000461350 WDR33Q9C0J8 1336 aaKnown RBP13.34□□□□□ -0.27
COPS7B-217ENST00000461350 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms