RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 HSPA2P54652 639 aa11.72□□□□□ -0.53
DHFR2-203ENST00000461173 GTF3C6Q969F1 213 aa11.72□□□□□ -0.53
DHFR2-203ENST00000461173 SCAND2PQ9GZW5 306 aaPredicted RBP11.72□□□□□ -0.53
DHFR2-203ENST00000461173 TOGARAM1Q9Y4F4 1720 aa11.71□□□□□ -0.53
DHFR2-203ENST00000461173 STARD3NLO95772 234 aa11.71□□□□□ -0.54
DHFR2-203ENST00000461173 ZFYP08048 801 aaPredicted RBP11.71□□□□□ -0.54
DHFR2-203ENST00000461173 EVA1CP58658 441 aa11.71□□□□□ -0.54
DHFR2-203ENST00000461173 HSP90AB3PQ58FF7 597 aa11.71□□□□□ -0.54
DHFR2-203ENST00000461173 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.54
DHFR2-203ENST00000461173 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.54
DHFR2-203ENST00000461173 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.54
DHFR2-203ENST00000461173 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.54
DHFR2-203ENST00000461173 DISP2A7MBM2 1401 aa11.71□□□□□ -0.54
DHFR2-203ENST00000461173 ZNF500O60304 480 aaPredicted RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 CYP21A2P08686 494 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 DHX32Q7L7V1 743 aaKnown RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 ZBTB38Q8NAP3 1195 aaPredicted RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 A0A1B0GUL7 405 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 RNF113AO15541 343 aaKnown RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 RGS22Q8NE09 1264 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
DHFR2-203ENST00000461173 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 KIF3AQ9Y496 699 aa11.7□□□□□ -0.54
DHFR2-203ENST00000461173 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
DHFR2-203ENST00000461173 FIBPO43427 364 aa11.69□□□□□ -0.54
DHFR2-203ENST00000461173 PFKFB2O60825 505 aa11.69□□□□□ -0.54
DHFR2-203ENST00000461173 IFIT1P09914 478 aaKnown RBP11.69□□□□□ -0.54
DHFR2-203ENST00000461173 MSNP26038 577 aaKnown RBP11.69□□□□□ -0.54
DHFR2-203ENST00000461173 TERF1P54274 439 aa11.69□□□□□ -0.54
DHFR2-203ENST00000461173 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
DHFR2-203ENST00000461173 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
DHFR2-203ENST00000461173 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
DHFR2-203ENST00000461173 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
DHFR2-203ENST00000461173 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
DHFR2-203ENST00000461173 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
DHFR2-203ENST00000461173 ZSCAN16Q9H4T2 348 aaPredicted RBP11.69□□□□□ -0.54
DHFR2-203ENST00000461173 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
DHFR2-203ENST00000461173 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
DHFR2-203ENST00000461173 EVCP57679 992 aa11.68□□□□□ -0.54
DHFR2-203ENST00000461173 EXOSC10Q01780 885 aaKnown RBP11.68□□□□□ -0.54
DHFR2-203ENST00000461173 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
DHFR2-203ENST00000461173 NEUROD6Q96NK8 337 aa11.68□□□□□ -0.54
DHFR2-203ENST00000461173 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
DHFR2-203ENST00000461173 ZKSCAN5Q9Y2L8 839 aa11.68□□□□□ -0.54
DHFR2-203ENST00000461173 TAF6LQ9Y6J9 622 aa11.68□□□□□ -0.54
DHFR2-203ENST00000461173 PLCH1Q4KWH8 1693 aa11.68□□□□□ -0.54
DHFR2-203ENST00000461173 GOLIM4O00461 696 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 HSPD1P10809 573 aaKnown RBP11.67□□□□□ -0.54
DHFR2-203ENST00000461173 TIMM10P62072 90 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 LRRC24Q50LG9 513 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 NAA16Q6N069 864 aaPredicted RBP11.67□□□□□ -0.54
DHFR2-203ENST00000461173 Q6ZUG5 572 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 PIGBQ92521 554 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 COL14A1Q05707 1796 aaKnown RBP11.67□□□□□ -0.54
DHFR2-203ENST00000461173 ZNF335Q9H4Z2 1342 aaPredicted RBP11.67□□□□□ -0.54
DHFR2-203ENST00000461173 BCL9O00512 1426 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 ERVV-1B6SEH8 477 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 ZNF274Q96GC6 653 aaPredicted RBP11.67□□□□□ -0.54
DHFR2-203ENST00000461173 AK7Q96M32 723 aa11.67□□□□□ -0.54
DHFR2-203ENST00000461173 WDR19Q8NEZ3 1342 aa11.66□□□□□ -0.54
DHFR2-203ENST00000461173 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
DHFR2-203ENST00000461173 COL9A3Q14050 684 aaPredicted RBP11.66□□□□□ -0.54
DHFR2-203ENST00000461173 FOXD4L6Q3SYB3 417 aaPredicted RBP11.66□□□□□ -0.54
DHFR2-203ENST00000461173 FOXD4L3Q6VB84 417 aaPredicted RBP11.66□□□□□ -0.54
DHFR2-203ENST00000461173 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
DHFR2-203ENST00000461173 TTC6Q86TZ1 520 aa11.66□□□□□ -0.54
DHFR2-203ENST00000461173 SEC62Q99442 399 aaKnown RBP11.66□□□□□ -0.54
DHFR2-203ENST00000461173 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
DHFR2-203ENST00000461173 DDX19AQ9NUU7 478 aaKnown RBP11.66□□□□□ -0.54
DHFR2-203ENST00000461173 MAST3O60307 1309 aa11.66□□□□□ -0.54
DHFR2-203ENST00000461173 OFD1O75665 1012 aa11.65□□□□□ -0.54
DHFR2-203ENST00000461173 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
DHFR2-203ENST00000461173 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.65□□□□□ -0.54
DHFR2-203ENST00000461173 RBM43Q6ZSC3 357 aaKnown RBP11.65□□□□□ -0.54
DHFR2-203ENST00000461173 STOX1Q6ZVD7 989 aa11.65□□□□□ -0.54
DHFR2-203ENST00000461173 DNAJC10Q8IXB1 793 aa11.65□□□□□ -0.54
DHFR2-203ENST00000461173 XAGE2Q96GT9 111 aa11.65□□□□□ -0.54
DHFR2-203ENST00000461173 CFAP45Q9UL16 551 aa11.65□□□□□ -0.54
DHFR2-203ENST00000461173 CCDC192P0DO97 292 aa11.65□□□□□ -0.55
DHFR2-203ENST00000461173 RESTQ13127 1097 aa11.65□□□□□ -0.55
DHFR2-203ENST00000461173 APPBP2Q92624 585 aa11.65□□□□□ -0.55
DHFR2-203ENST00000461173 CDCA7Q9BWT1 371 aaPredicted RBP11.65□□□□□ -0.55
DHFR2-203ENST00000461173 RIPOR2Q9Y4F9 1068 aa11.65□□□□□ -0.55
DHFR2-203ENST00000461173 ITGB4P16144 1822 aa11.65□□□□□ -0.55
DHFR2-203ENST00000461173 SALL1Q9NSC2 1324 aa11.64□□□□□ -0.55
DHFR2-203ENST00000461173 COL22A1Q8NFW1 1626 aaPredicted RBP11.64□□□□□ -0.55
DHFR2-203ENST00000461173 E7EWF7 191 aa11.64□□□□□ -0.55
DHFR2-203ENST00000461173 ATRNO75882 1429 aa11.64□□□□□ -0.55
DHFR2-203ENST00000461173 CAVIN2O95810 425 aa11.64□□□□□ -0.55
DHFR2-203ENST00000461173 CYP19A1P11511 503 aaPredicted RBP11.64□□□□□ -0.55
DHFR2-203ENST00000461173 SCRN1Q12765 414 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms