RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 ABCA3Q99758 1704 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 CRYBG1Q9Y4K1 1723 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 MAP2P11137 1827 aaKnown RBP7.78□□□□□ -1.16
NUP98-208ENST00000461047 NR3C2P08235 984 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 CALD1Q05682 793 aaKnown RBP7.78□□□□□ -1.16
NUP98-208ENST00000461047 ERFEQ4G0M1 354 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 TPRNQ4KMQ1 711 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 TMEM259Q4ZIN3 620 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 IFNL2Q8IZJ0 200 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
NUP98-208ENST00000461047 SLC16A10Q8TF71 515 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 ITPKCQ96DU7 683 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 PURBQ96QR8 312 aaKnown RBP7.78□□□□□ -1.16
NUP98-208ENST00000461047 NWD2Q9ULI1 1742 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 MARF1Q9Y4F3 1742 aaKnown RBP7.78□□□□□ -1.16
NUP98-208ENST00000461047 PCDH11XQ9BZA7 1347 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 PCDH11YQ9BZA8 1340 aa7.78□□□□□ -1.16
NUP98-208ENST00000461047 LTN1O94822 1766 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 LMO7Q8WWI1 1683 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 KDRP35968 1356 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 GNAT3A8MTJ3 354 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 HTATSF1O43719 755 aaKnown RBP7.77□□□□□ -1.17
NUP98-208ENST00000461047 CCDC184Q52MB2 194 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
NUP98-208ENST00000461047 AEBP1Q8IUX7 1158 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 CCDC116Q8IYX3 515 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 ZFAND3Q9H8U3 227 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 GPSM3Q9Y4H4 160 aa7.77□□□□□ -1.17
NUP98-208ENST00000461047 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
NUP98-208ENST00000461047 HMGB2P26583 209 aaKnown RBP7.76□□□□□ -1.17
NUP98-208ENST00000461047 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
NUP98-208ENST00000461047 AKAP4Q5JQC9 854 aa7.76□□□□□ -1.17
NUP98-208ENST00000461047 POTEAQ6S8J7 498 aa7.76□□□□□ -1.17
NUP98-208ENST00000461047 KRT27Q7Z3Y8 459 aa7.76□□□□□ -1.17
NUP98-208ENST00000461047 KLF16Q9BXK1 252 aaPredicted RBP7.76□□□□□ -1.17
NUP98-208ENST00000461047 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
NUP98-208ENST00000461047 COL18A1P39060 1754 aa7.76□□□□□ -1.17
NUP98-208ENST00000461047 COL3A1P02461 1466 aaPredicted RBP7.75□□□□□ -1.17
NUP98-208ENST00000461047 PEAK1Q9H792 1746 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 BMP2P12643 396 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 BRPF1P55201 1214 aaPredicted RBP7.75□□□□□ -1.17
NUP98-208ENST00000461047 RIPK4P57078 832 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 MTHFSDQ2M296 383 aaKnown RBP7.75□□□□□ -1.17
NUP98-208ENST00000461047 C6orf118Q5T5N4 469 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 FAM196AQ6ZSG2 479 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 CCDC146Q8IYE0 955 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 DCAF5Q96JK2 942 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 RGS17Q9UGC6 210 aaPredicted RBP7.75□□□□□ -1.17
NUP98-208ENST00000461047 PLCH1Q4KWH8 1693 aa7.75□□□□□ -1.17
NUP98-208ENST00000461047 FAM208AQ9UK61 1670 aaKnown RBP7.75□□□□□ -1.17
NUP98-208ENST00000461047 APAF1O14727 1248 aa7.74□□□□□ -1.17
NUP98-208ENST00000461047 PHKG2P15735 406 aa7.74□□□□□ -1.17
NUP98-208ENST00000461047 TMPOP42166 694 aaKnown RBP7.74□□□□□ -1.17
NUP98-208ENST00000461047 CABP4P57796 275 aa7.74□□□□□ -1.17
NUP98-208ENST00000461047 DHX9Q08211 1270 aaKnown RBP7.74□□□□□ -1.17
NUP98-208ENST00000461047 TEFQ10587 303 aa7.74□□□□□ -1.17
NUP98-208ENST00000461047 NFX1Q12986 1120 aaKnown RBP7.74□□□□□ -1.17
NUP98-208ENST00000461047 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
NUP98-208ENST00000461047 PLEKHF1Q96S99 279 aa7.74□□□□□ -1.17
NUP98-208ENST00000461047 KCTD15Q96SI1 283 aaPredicted RBP7.74□□□□□ -1.17
NUP98-208ENST00000461047 NXF1Q9UBU9 619 aaKnown RBP7.74□□□□□ -1.17
NUP98-208ENST00000461047 OVOS2A0A0G2JMS6 1433 aa7.74□□□□□ -1.17
NUP98-208ENST00000461047 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.73□□□□□ -1.17
NUP98-208ENST00000461047 NCAPD2Q15021 1401 aa7.73□□□□□ -1.17
NUP98-208ENST00000461047 ERVV-2B6SEH9 535 aa7.73□□□□□ -1.17
NUP98-208ENST00000461047 MAN1A2O60476 641 aa7.73□□□□□ -1.17
NUP98-208ENST00000461047 SF3B2Q13435 895 aaKnown RBP7.73□□□□□ -1.17
NUP98-208ENST00000461047 NBPF20Q3BBV1 942 aa7.73□□□□□ -1.17
NUP98-208ENST00000461047 ADAM32Q8TC27 787 aa7.73□□□□□ -1.17
NUP98-208ENST00000461047 EPS8L1Q8TE68 723 aa7.73□□□□□ -1.17
NUP98-208ENST00000461047 HMX1Q9NP08 348 aaPredicted RBP7.73□□□□□ -1.17
NUP98-208ENST00000461047 DISP2A7MBM2 1401 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 HNRNPUQ00839 825 aaKnown RBP eCLIP7.72□□□□□ -1.17
NUP98-208ENST00000461047 CCDC27Q2M243 656 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 PPP1R26Q5T8A7 1209 aaPredicted RBP7.72□□□□□ -1.17
NUP98-208ENST00000461047 MPRIPQ6WCQ1 1025 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 DZIP3Q86Y13 1208 aaKnown RBP7.72□□□□□ -1.17
NUP98-208ENST00000461047 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 MEIOBQ8N635 442 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 SYTL4Q96C24 671 aaPredicted RBP7.72□□□□□ -1.17
NUP98-208ENST00000461047 TSEN34Q9BSV6 310 aaKnown RBP7.72□□□□□ -1.17
NUP98-208ENST00000461047 CHMP4AQ9BY43 222 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 TMOD3Q9NYL9 352 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 NRAPQ86VF7 1730 aa7.72□□□□□ -1.17
NUP98-208ENST00000461047 MAP3K5Q99683 1374 aa7.71□□□□□ -1.17
NUP98-208ENST00000461047 TNS2Q63HR2 1409 aa7.71□□□□□ -1.17
NUP98-208ENST00000461047 CYP27B1O15528 508 aa7.71□□□□□ -1.18
NUP98-208ENST00000461047 RNMTO43148 476 aaKnown RBP7.71□□□□□ -1.18
NUP98-208ENST00000461047 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.18
NUP98-208ENST00000461047 CCDC125Q86Z20 511 aa7.71□□□□□ -1.18
NUP98-208ENST00000461047 WDR63Q8IWG1 891 aa7.71□□□□□ -1.18
NUP98-208ENST00000461047 NPAS3Q8IXF0 933 aa7.71□□□□□ -1.18
NUP98-208ENST00000461047 MARCH10Q8NA82 808 aaPredicted RBP7.71□□□□□ -1.18
NUP98-208ENST00000461047 SMARCC1Q92922 1105 aaPredicted RBP7.71□□□□□ -1.18
NUP98-208ENST00000461047 RRP7AQ9Y3A4 280 aaKnown RBP7.71□□□□□ -1.18
NUP98-208ENST00000461047 MEGF6O75095 1541 aa7.71□□□□□ -1.18
NUP98-208ENST00000461047 GNAI1P63096 354 aa7.7□□□□□ -1.18
NUP98-208ENST00000461047 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
NUP98-208ENST00000461047 TTC5Q8N0Z6 440 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms