RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 ZIC5Q96T25 663 aa12.73□□□□□ -0.37
SYN3-205ENST00000459990 ZNF609O15014 1411 aa12.72□□□□□ -0.37
SYN3-205ENST00000459990 ASTN2O75129 1339 aaPredicted RBP12.72□□□□□ -0.37
SYN3-205ENST00000459990 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
SYN3-205ENST00000459990 ECE1P42892 770 aa12.72□□□□□ -0.37
SYN3-205ENST00000459990 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
SYN3-205ENST00000459990 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
SYN3-205ENST00000459990 RIC3Q7Z5B4 369 aa12.72□□□□□ -0.37
SYN3-205ENST00000459990 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
SYN3-205ENST00000459990 WTIPA6NIX2 430 aaPredicted RBP12.71□□□□□ -0.37
SYN3-205ENST00000459990 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 PCCAP05165 728 aaPredicted RBP12.71□□□□□ -0.37
SYN3-205ENST00000459990 IGKV5-2P06315 115 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 RPS8P62241 208 aaKnown RBP12.71□□□□□ -0.37
SYN3-205ENST00000459990 GNAI1P63096 354 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 DPF2Q92785 391 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
SYN3-205ENST00000459990 ABHD8Q96I13 439 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 PODXL2Q9NZ53 605 aa12.71□□□□□ -0.37
SYN3-205ENST00000459990 UFL1O94874 794 aa12.7□□□□□ -0.38
SYN3-205ENST00000459990 CCDC191Q8NCU4 936 aa12.7□□□□□ -0.38
SYN3-205ENST00000459990 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
SYN3-205ENST00000459990 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
SYN3-205ENST00000459990 AKAP11Q9UKA4 1901 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 H7C1D1 291 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 PDE8AO60658 829 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 MAP2K2P36507 400 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 EYA3Q99504 573 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
SYN3-205ENST00000459990 MAP3K2Q9Y2U5 619 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
SYN3-205ENST00000459990 PAPPA2Q9BXP8 1791 aa12.69□□□□□ -0.38
SYN3-205ENST00000459990 FAM155AB1AL88 458 aaPredicted RBP12.68□□□□□ -0.38
SYN3-205ENST00000459990 VIL1P09327 827 aaKnown RBP12.68□□□□□ -0.38
SYN3-205ENST00000459990 RPS12P25398 132 aaKnown RBP12.68□□□□□ -0.38
SYN3-205ENST00000459990 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
SYN3-205ENST00000459990 RBM26Q5T8P6 1007 aaKnown RBP12.68□□□□□ -0.38
SYN3-205ENST00000459990 G2E3Q7L622 706 aa12.68□□□□□ -0.38
SYN3-205ENST00000459990 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
SYN3-205ENST00000459990 PI4KAP2A4QPH2 592 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 CTSWP56202 376 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 HUNKP57058 714 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 CWF19L2Q2TBE0 894 aaKnown RBP12.67□□□□□ -0.38
SYN3-205ENST00000459990 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 KRT26Q7Z3Y9 468 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 PI4KAP1Q8N8J0 262 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 GGA1Q9UJY5 639 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
SYN3-205ENST00000459990 ZNF280AP59817 542 aaPredicted RBP12.66□□□□□ -0.38
SYN3-205ENST00000459990 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
SYN3-205ENST00000459990 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
SYN3-205ENST00000459990 GMLQ99445 158 aa12.66□□□□□ -0.38
SYN3-205ENST00000459990 ZC3H12CQ9C0D7 883 aaKnown RBP12.66□□□□□ -0.38
SYN3-205ENST00000459990 GREM2Q9H772 168 aa12.66□□□□□ -0.38
SYN3-205ENST00000459990 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
SYN3-205ENST00000459990 SCAF8Q9UPN6 1271 aaKnown RBP12.66□□□□□ -0.38
SYN3-205ENST00000459990 XDHP47989 1333 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 NEURL1BA8MQ27 555 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
SYN3-205ENST00000459990 KSR2Q6VAB6 950 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 TTLL11Q8NHH1 800 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.38
SYN3-205ENST00000459990 LAMB1P07942 1786 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 MED23Q9ULK4 1368 aa12.65□□□□□ -0.38
SYN3-205ENST00000459990 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
SYN3-205ENST00000459990 KLRK1P26718 216 aa12.64□□□□□ -0.39
SYN3-205ENST00000459990 ANGEL2Q5VTE6 544 aaKnown RBP12.64□□□□□ -0.39
SYN3-205ENST00000459990 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
SYN3-205ENST00000459990 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
SYN3-205ENST00000459990 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
SYN3-205ENST00000459990 CDCA5Q96FF9 252 aa12.64□□□□□ -0.39
SYN3-205ENST00000459990 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
SYN3-205ENST00000459990 CASP7P55210 303 aa12.63□□□□□ -0.39
SYN3-205ENST00000459990 NOGQ13253 232 aa12.63□□□□□ -0.39
SYN3-205ENST00000459990 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
SYN3-205ENST00000459990 TWISTNBQ3B726 338 aaPredicted RBP12.63□□□□□ -0.39
SYN3-205ENST00000459990 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
SYN3-205ENST00000459990 UBE3BQ7Z3V4 1068 aa12.63□□□□□ -0.39
SYN3-205ENST00000459990 DCPSQ96C86 337 aaKnown RBP12.63□□□□□ -0.39
SYN3-205ENST00000459990 MCOLN1Q9GZU1 580 aa12.63□□□□□ -0.39
SYN3-205ENST00000459990 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
SYN3-205ENST00000459990 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 ARAP2Q8WZ64 1704 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 H7C1W4 665 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 CA12O43570 354 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 SLC10A3P09131 477 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 SCARF1Q14162 830 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 MOB2Q70IA6 237 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 AGBL3Q8NEM8 1001 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
SYN3-205ENST00000459990 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
SYN3-205ENST00000459990 DACT2Q5SW24 774 aa12.61□□□□□ -0.39
SYN3-205ENST00000459990 RASAL3Q86YV0 1011 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms