RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 NRAPQ86VF7 1730 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 DISP2A7MBM2 1401 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 PCDH11XQ9BZA7 1347 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 PCDH11YQ9BZA8 1340 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 MYH3P11055 1940 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 EP400Q96L91 3159 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 PALLDQ8WX93 1383 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 TJP1Q07157 1748 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 NEURL1BA8MQ27 555 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 CTAGE5O15320 804 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 FIBPO43427 364 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 CDC25BP30305 580 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 KCNJ4P48050 445 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 GCKRQ14397 625 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 NKX1-1Q15270 411 aaPredicted RBP7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 SYCP1Q15431 976 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 MPRIPQ6WCQ1 1025 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 FBXL16Q8N461 479 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 BCL11BQ9C0K0 894 aaPredicted RBP7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 NUP62CLQ9H1M0 184 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 BICC1Q9H694 974 aaKnown RBP7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 CFAP45Q9UL16 551 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 TPCN1Q9ULQ1 816 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 KIF3AQ9Y496 699 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 CHD4Q14839 1912 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 GLI3P10071 1580 aa7.25□□□□□ -1.25
UBQLN4-202ENST00000459954 PAPPAQ13219 1627 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 PLSCR1O15162 318 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 NEMFO60524 1076 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 TAF5LO75529 589 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 IGKV5-2P06315 115 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 TOB2Q14106 344 aaPredicted RBP7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 DHX8Q14562 1220 aaKnown RBP7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 NAA16Q6N069 864 aaPredicted RBP7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 ZNF790Q6PG37 636 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 RIC3Q7Z5B4 369 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 TTC6Q86TZ1 520 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 IFNL2Q8IZJ0 200 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 TDRD7Q8NHU6 1098 aaKnown RBP7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 SMARCC2Q8TAQ2 1214 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 GTF3C6Q969F1 213 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 FSD1Q9BTV5 496 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 AGXT2Q9BYV1 514 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 CLSTN2Q9H4D0 955 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 SLC52A2Q9HAB3 445 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 PODXL2Q9NZ53 605 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 TNS2Q63HR2 1409 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 SH3TC1Q8TE82 1336 aa7.24□□□□□ -1.25
UBQLN4-202ENST00000459954 A0A0D9SFI3 127 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 VPS37CA5D8V6 355 aaPredicted RBP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 GOLGA6L4A6NEF3 574 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 ERVV-2B6SEH9 535 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 BAG6P46379 1132 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 RFX5P48382 616 aaPredicted RBP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 TYRO3Q06418 890 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 CHAF1AQ13111 956 aaPredicted RBP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 PROSER3Q2NL68 480 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 CWF19L2Q2TBE0 894 aaKnown RBP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 MCMDC2Q4G0Z9 681 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 GIMAP6Q6P9H5 292 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 SARM1Q6SZW1 724 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 ILDR2Q71H61 639 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 SMAP1Q8IYB5 467 aaPredicted RBP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 LEO1Q8WVC0 666 aaPredicted RBP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 DCAF5Q96JK2 942 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 SPATA32Q96LK8 384 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 FAM227BQ96M60 508 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 NEK1Q96PY6 1258 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 HAUS7Q99871 368 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 DSCC1Q9BVC3 393 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 HELLSQ9NRZ9 838 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 PA2G4Q9UQ80 394 aaKnown RBP7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 MRVI1Q9Y6F6 885 aa7.23□□□□□ -1.25
UBQLN4-202ENST00000459954 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 KDM6AO15550 1401 aaPredicted RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 TULP1O00294 542 aaPredicted RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 CTIFO43310 598 aaKnown RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 PFKFB2O60825 505 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 ANXA1P04083 346 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 SNRPA1P09661 255 aaKnown RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 CPA1P15085 419 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 PTPN12Q05209 780 aaKnown RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 RESTQ13127 1097 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 LRRFIP1Q32MZ4 808 aaKnown RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 TNNI3KQ59H18 835 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 DNTTIP2Q5QJE6 756 aaKnown RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 CDC37L1Q7L3B6 337 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 LRP10Q7Z4F1 713 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 PLA2G4DQ86XP0 818 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 UPF1Q92900 1129 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 SMARCC1Q92922 1105 aaPredicted RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 CCDC94Q9BW85 323 aaPredicted RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 CCDC8Q9H0W5 538 aaPredicted RBP7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 TNMDQ9H2S6 317 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 KCND1Q9NSA2 647 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 FBXO3Q9UK99 471 aa7.22□□□□□ -1.25
UBQLN4-202ENST00000459954 RCOR1Q9UKL0 485 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms