RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CAMKK2Q96RR4 588 aa29.75■■■□□ 2.35
U2AF1-204ENST00000459639 C22orf23Q9BZE7 217 aa29.75■■■□□ 2.35
U2AF1-204ENST00000459639 CNBD1Q8NA66 436 aa29.74■■■□□ 2.35
U2AF1-204ENST00000459639 COL4A1P02462 1669 aa29.74■■■□□ 2.35
U2AF1-204ENST00000459639 NPHP1O15259 732 aa29.73■■■□□ 2.35
U2AF1-204ENST00000459639 TAF1P21675 1872 aa29.73■■■□□ 2.35
U2AF1-204ENST00000459639 ATP2B3Q16720 1220 aa29.72■■■□□ 2.35
U2AF1-204ENST00000459639 BOLA2Q9H3K6 86 aa29.72■■■□□ 2.35
U2AF1-204ENST00000459639 PDE8BO95263 885 aa29.72■■■□□ 2.35
U2AF1-204ENST00000459639 COL23A1Q86Y22 540 aaPredicted RBP29.72■■■□□ 2.35
U2AF1-204ENST00000459639 EZH2Q15910 746 aaKnown RBP29.7■■■□□ 2.35
U2AF1-204ENST00000459639 ANKRD18AQ8IVF6 992 aa29.7■■■□□ 2.35
U2AF1-204ENST00000459639 ESYT1Q9BSJ8 1104 aa29.7■■■□□ 2.35
U2AF1-204ENST00000459639 NRXN2Q9P2S2 1712 aa29.7■■■□□ 2.35
U2AF1-204ENST00000459639 REC8O95072 547 aa29.69■■■□□ 2.34
U2AF1-204ENST00000459639 RBM25P49756 843 aaKnown RBP29.69■■■□□ 2.34
U2AF1-204ENST00000459639 EN1Q05925 392 aaPredicted RBP29.69■■■□□ 2.34
U2AF1-204ENST00000459639 PRR5LQ6MZQ0 368 aa29.69■■■□□ 2.34
U2AF1-204ENST00000459639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.69■■■□□ 2.34
U2AF1-204ENST00000459639 XAGE2Q96GT9 111 aa29.69■■■□□ 2.34
U2AF1-204ENST00000459639 PNPLA7Q6ZV29 1317 aa29.69■■■□□ 2.34
U2AF1-204ENST00000459639 SERPINB2P05120 415 aa29.69■■■□□ 2.34
U2AF1-204ENST00000459639 SF3B2Q13435 895 aaKnown RBP29.69■■■□□ 2.34
U2AF1-204ENST00000459639 DDRGK1Q96HY6 314 aa29.69■■■□□ 2.34
U2AF1-204ENST00000459639 HAUS7Q99871 368 aa29.69■■■□□ 2.34
U2AF1-204ENST00000459639 PUM3Q15397 648 aaKnown RBP29.68■■■□□ 2.34
U2AF1-204ENST00000459639 NLGN1Q8N2Q7 840 aa29.68■■■□□ 2.34
U2AF1-204ENST00000459639 ST5P78524 1137 aa29.67■■■□□ 2.34
U2AF1-204ENST00000459639 IPO9Q96P70 1041 aaKnown RBP29.67■■■□□ 2.34
U2AF1-204ENST00000459639 RFX7Q2KHR2 1363 aa29.67■■■□□ 2.34
U2AF1-204ENST00000459639 POLRMTO00411 1230 aaKnown RBP29.66■■■□□ 2.34
U2AF1-204ENST00000459639 BAG6P46379 1132 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 DDR1Q08345 913 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 CCDC158Q5M9N0 1113 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 CCDC24Q8N4L8 307 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 BSDC1Q9NW68 430 aaPredicted RBP29.66■■■□□ 2.34
U2AF1-204ENST00000459639 HIP1O00291 1037 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 FGFR2P21802 821 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 ADORA1P30542 326 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 GORABQ5T7V8 394 aa29.66■■■□□ 2.34
U2AF1-204ENST00000459639 MSH5O43196 834 aa29.65■■■□□ 2.34
U2AF1-204ENST00000459639 LPIN2Q92539 896 aa29.65■■■□□ 2.34
U2AF1-204ENST00000459639 DIAPH3Q9NSV4 1193 aa29.64■■■□□ 2.34
U2AF1-204ENST00000459639 TTC39AQ5SRH9 613 aa29.63■■■□□ 2.33
U2AF1-204ENST00000459639 ANO8Q9HCE9 1232 aaPredicted RBP29.63■■■□□ 2.33
U2AF1-204ENST00000459639 STK32BQ9NY57 414 aa29.63■■■□□ 2.33
U2AF1-204ENST00000459639 IFIT1P09914 478 aaKnown RBP29.63■■■□□ 2.33
U2AF1-204ENST00000459639 CHRNDQ07001 517 aa29.63■■■□□ 2.33
U2AF1-204ENST00000459639 SLC15A2Q16348 729 aa29.63■■■□□ 2.33
U2AF1-204ENST00000459639 DDX46Q7L014 1031 aaKnown RBP29.63■■■□□ 2.33
U2AF1-204ENST00000459639 CELF1Q92879 486 aaKnown RBP29.63■■■□□ 2.33
U2AF1-204ENST00000459639 FSD1Q9BTV5 496 aa29.63■■■□□ 2.33
U2AF1-204ENST00000459639 USP26Q9BXU7 913 aa29.63■■■□□ 2.33
U2AF1-204ENST00000459639 SLC5A1P13866 664 aa29.62■■■□□ 2.33
U2AF1-204ENST00000459639 HELBQ8NG08 1087 aaPredicted RBP29.62■■■□□ 2.33
U2AF1-204ENST00000459639 RUFY2Q8WXA3 655 aa29.62■■■□□ 2.33
U2AF1-204ENST00000459639 DNAJC2Q99543 621 aaKnown RBP29.62■■■□□ 2.33
U2AF1-204ENST00000459639 RPS8P62241 208 aaKnown RBP29.61■■■□□ 2.33
U2AF1-204ENST00000459639 ZNF512BQ96KM6 892 aaPredicted RBP29.61■■■□□ 2.33
U2AF1-204ENST00000459639 AKAP11Q9UKA4 1901 aa29.61■■■□□ 2.33
U2AF1-204ENST00000459639 ANKRD31Q8N7Z5 1873 aa29.61■■■□□ 2.33
U2AF1-204ENST00000459639 SGSM2O43147 1006 aa29.6■■■□□ 2.33
U2AF1-204ENST00000459639 EPB41L2O43491 1005 aaKnown RBP29.6■■■□□ 2.33
U2AF1-204ENST00000459639 TICAM2Q86XR7 235 aa29.6■■■□□ 2.33
U2AF1-204ENST00000459639 PAG1Q9NWQ8 432 aa29.6■■■□□ 2.33
U2AF1-204ENST00000459639 TAF5LO75529 589 aa29.59■■■□□ 2.33
U2AF1-204ENST00000459639 CRY2Q49AN0 593 aa29.59■■■□□ 2.33
U2AF1-204ENST00000459639 EDC3Q96F86 508 aaKnown RBP29.59■■■□□ 2.33
U2AF1-204ENST00000459639 RAD50Q92878 1312 aa29.58■■■□□ 2.33
U2AF1-204ENST00000459639 CWC27Q6UX04 472 aaKnown RBP29.57■■■□□ 2.32
U2AF1-204ENST00000459639 KBTBD3Q8NAB2 608 aa29.57■■■□□ 2.32
U2AF1-204ENST00000459639 MINPP1Q9UNW1 487 aa29.57■■■□□ 2.32
U2AF1-204ENST00000459639 NDUFB9Q9Y6M9 179 aa29.56■■■□□ 2.32
U2AF1-204ENST00000459639 GRAPQ13588 217 aa29.56■■■□□ 2.32
U2AF1-204ENST00000459639 GRAPLQ8TC17 118 aaPredicted RBP29.56■■■□□ 2.32
U2AF1-204ENST00000459639 IL25Q9H293 177 aa29.56■■■□□ 2.32
U2AF1-204ENST00000459639 MYH7P12883 1935 aa29.55■■■□□ 2.32
U2AF1-204ENST00000459639 GOLIM4O00461 696 aa29.55■■■□□ 2.32
U2AF1-204ENST00000459639 UQCRFS1P1P0C7P4 283 aa29.55■■■□□ 2.32
U2AF1-204ENST00000459639 ARID4AP29374 1257 aaPredicted RBP29.55■■■□□ 2.32
U2AF1-204ENST00000459639 DEFB132Q7Z7B7 95 aa29.55■■■□□ 2.32
U2AF1-204ENST00000459639 RPGRQ92834 1020 aaKnown RBP29.55■■■□□ 2.32
U2AF1-204ENST00000459639 ANO2Q9NQ90 1003 aa29.55■■■□□ 2.32
U2AF1-204ENST00000459639 KLRG2A4D1S0 409 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-204ENST00000459639 UBE4AQ14139 1066 aa29.54■■■□□ 2.32
U2AF1-204ENST00000459639 CCDC102BQ68D86 513 aa29.54■■■□□ 2.32
U2AF1-204ENST00000459639 CCDC125Q86Z20 511 aa29.53■■■□□ 2.32
U2AF1-204ENST00000459639 ANKRD2Q9GZV1 360 aa29.53■■■□□ 2.32
U2AF1-204ENST00000459639 PARP3Q9Y6F1 533 aa29.53■■■□□ 2.32
U2AF1-204ENST00000459639 MMP10P09238 476 aa29.53■■■□□ 2.32
U2AF1-204ENST00000459639 NMIQ13287 307 aaPredicted RBP29.53■■■□□ 2.32
U2AF1-204ENST00000459639 SNRKQ9NRH2 765 aa29.53■■■□□ 2.32
U2AF1-204ENST00000459639 PHKA1P46020 1223 aa29.52■■■□□ 2.32
U2AF1-204ENST00000459639 SCARF1Q14162 830 aa29.52■■■□□ 2.32
U2AF1-204ENST00000459639 RBM17Q96I25 401 aaKnown RBP29.51■■■□□ 2.31
U2AF1-204ENST00000459639 KIF2CQ99661 725 aa29.51■■■□□ 2.31
U2AF1-204ENST00000459639 BRIP1Q9BX63 1249 aa29.51■■■□□ 2.31
U2AF1-204ENST00000459639 SNAP23O00161 211 aa29.5■■■□□ 2.31
U2AF1-204ENST00000459639 MCCP23508 829 aa29.5■■■□□ 2.31
U2AF1-204ENST00000459639 HOXA10P31260 410 aaPredicted RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms