RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ANKIB1Q9P2G1 1089 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 LAMB2P55268 1798 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 C4AP0C0L4 1744 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 UBN2Q6ZU65 1347 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 TNS1Q9HBL0 1735 aaKnown RBP7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 H0YIN7 160 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 BBOX1O75936 387 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 GYS1P13807 737 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 CASP7P55210 303 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 NFIXQ14938 502 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 SF3B3Q15393 1217 aaKnown RBP7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 PUM3Q15397 648 aaKnown RBP7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 ATP2B3Q16720 1220 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 TNNI3KQ59H18 835 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 EPHA10Q5JZY3 1008 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 TICAM2Q86XR7 235 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 KLHDC4Q8TBB5 520 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 OTUD5Q96G74 571 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 CAMKK2Q96RR4 588 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 BACH2Q9BYV9 841 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 CCDC8Q9H0W5 538 aaPredicted RBP7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 GREM2Q9H772 168 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 BSDC1Q9NW68 430 aaPredicted RBP7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 STAP2Q9UGK3 403 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 FPGT-TNNI3KV9GXZ4 949 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 SPEF2Q9C093 1822 aa7.08□□□□□ -1.28
RNU1-88P-201ENST00000459274 A0A1B0GUL7 405 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 PDE8BO95263 885 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 BECN1Q14457 450 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 WASHC4Q2M389 1173 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 COL23A1Q86Y22 540 aaPredicted RBP7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 C16orf71Q8IYS4 520 aaPredicted RBP7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 IL27Q8NEV9 243 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 LPIN2Q92539 896 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 AKT1S1Q96B36 256 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 KAZALD1Q96I82 304 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZNF594Q96JF6 807 aaPredicted RBP7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 FSD1Q9BTV5 496 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 BRIP1Q9BX63 1249 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 RTL9Q8NET4 1388 aa7.07□□□□□ -1.28
RNU1-88P-201ENST00000459274 SASH1O94885 1247 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 MMP10P09238 476 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 NPR1P16066 1061 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 ATP5JP18859 108 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 FKBP4Q02790 459 aaKnown RBP eCLIP7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 UBE4AQ14139 1066 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 GRIPAP1Q4V328 841 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 PROM2Q8N271 834 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 CNKSR1Q969H4 720 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZNF622Q969S3 477 aaKnown RBP eCLIP7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 DNAJC2Q99543 621 aaKnown RBP7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 BOLA2Q9H3K6 86 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 QSER1Q2KHR3 1735 aa7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 DDX60Q8IY21 1712 aaKnown RBP7.06□□□□□ -1.28
RNU1-88P-201ENST00000459274 MYH13Q9UKX3 1938 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZFYP08048 801 aaPredicted RBP7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 SDSP20132 328 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 TM4SF1P30408 202 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 RFX5P48382 616 aaPredicted RBP7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 TIMM10P62072 90 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 CHRNDQ07001 517 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 GRAPQ13588 217 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 LRRC24Q50LG9 513 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 RNF20Q5VTR2 975 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 PRR5LQ6MZQ0 368 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZNF804AQ7Z570 1209 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 SYNE4Q8N205 404 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZGPATQ8N5A5 531 aaKnown RBP7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 GRAPLQ8TC17 118 aaPredicted RBP7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 EAF2Q96CJ1 260 aaPredicted RBP7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 XAGE2Q96GT9 111 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 MASTLQ96GX5 879 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 CRAMP1Q96RY5 1269 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 EYA3Q99504 573 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 NOL10Q9BSC4 688 aaKnown RBP7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 BCL2L12Q9HB09 334 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 LEMD3Q9Y2U8 911 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 RIPOR2Q9Y4F9 1068 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 CASZ1Q86V15 1759 aa7.05□□□□□ -1.28
RNU1-88P-201ENST00000459274 COL24A1Q17RW2 1714 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 PNPLA7Q6ZV29 1317 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 POLRMTO00411 1230 aaKnown RBP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 HSP90AA1P07900 732 aaKnown RBP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZKSCAN1P17029 563 aaPredicted RBP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 ATP2B4P23634 1241 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 MAP3K12Q12852 859 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZNF827Q17R98 1081 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 SPTY2D1Q68D10 685 aaPredicted RBP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 MSL1Q68DK7 614 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 CC2D2BQ6DHV5 1058 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 SMIM5Q71RC9 77 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 ATG9AQ7Z3C6 839 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 DEFB132Q7Z7B7 95 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 SUPT20HQ8NEM7 779 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 PUS3Q9BZE2 481 aaKnown RBP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 SEC31BQ9NQW1 1179 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 PAG1Q9NWQ8 432 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 LRP2BPQ9P2M1 347 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms