RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 NPR1P16066 1061 aa7.59□□□□□ -1.19
VPS8-214ENST00000458721 GRIPAP1Q4V328 841 aa7.59□□□□□ -1.19
VPS8-214ENST00000458721 PNMA8AQ86V59 439 aaPredicted RBP7.59□□□□□ -1.19
VPS8-214ENST00000458721 RTKN2Q8IZC4 609 aa7.59□□□□□ -1.19
VPS8-214ENST00000458721 TRPM7Q96QT4 1865 aa7.59□□□□□ -1.19
VPS8-214ENST00000458721 SNED1Q8TER0 1413 aa7.59□□□□□ -1.19
VPS8-214ENST00000458721 NUP98P52948 1817 aa7.58□□□□□ -1.2
VPS8-214ENST00000458721 CTCFP49711 727 aaPredicted RBP7.58□□□□□ -1.2
VPS8-214ENST00000458721 FKBP4Q02790 459 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS8-214ENST00000458721 KCNC4Q03721 635 aa7.58□□□□□ -1.2
VPS8-214ENST00000458721 BICDL1Q6ZP65 573 aa7.58□□□□□ -1.2
VPS8-214ENST00000458721 NBPF5PQ86XG9 351 aaPredicted RBP7.58□□□□□ -1.2
VPS8-214ENST00000458721 DZIP3Q86Y13 1208 aaKnown RBP7.58□□□□□ -1.2
VPS8-214ENST00000458721 NECTIN2Q92692 538 aa7.58□□□□□ -1.2
VPS8-214ENST00000458721 AIDAQ96BJ3 306 aa7.58□□□□□ -1.2
VPS8-214ENST00000458721 TAF1DQ9H5J8 278 aaPredicted RBP7.58□□□□□ -1.2
VPS8-214ENST00000458721 RASSF10A6NK89 507 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 TMEM88BA6NKF7 163 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 RNF40O75150 1001 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 ALDH1B1P30837 517 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 CC2D2BQ6DHV5 1058 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 SMYD5Q6GMV2 418 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 GPC2Q8N158 579 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 IL17REQ8NFR9 667 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 PSMD1Q99460 953 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 HACL1Q9UJ83 578 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
VPS8-214ENST00000458721 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
VPS8-214ENST00000458721 DLG5Q8TDM6 1919 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 TESPA1A2RU30 521 aaPredicted RBP7.56□□□□□ -1.2
VPS8-214ENST00000458721 BTBD11A6QL63 1104 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 FZD9O00144 591 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 HTATSF1O43719 755 aaKnown RBP7.56□□□□□ -1.2
VPS8-214ENST00000458721 DDNO94850 711 aaPredicted RBP7.56□□□□□ -1.2
VPS8-214ENST00000458721 SNRPA1P09661 255 aaKnown RBP7.56□□□□□ -1.2
VPS8-214ENST00000458721 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 MAP2K1Q02750 393 aaPredicted RBP7.56□□□□□ -1.2
VPS8-214ENST00000458721 TPTE2Q6XPS3 522 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 CFAP53Q96M91 514 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 NYXQ9GZU5 481 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 MKRN1Q9UHC7 482 aaKnown RBP7.56□□□□□ -1.2
VPS8-214ENST00000458721 ANKRD36CQ5JPF3 1778 aa7.56□□□□□ -1.2
VPS8-214ENST00000458721 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
VPS8-214ENST00000458721 FOXN1O15353 648 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 A1BGP04217 495 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 EPHX2P34913 555 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 IARSP41252 1262 aaKnown RBP7.55□□□□□ -1.2
VPS8-214ENST00000458721 CRY2Q49AN0 593 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 SWT1Q5T5J6 900 aaKnown RBP7.55□□□□□ -1.2
VPS8-214ENST00000458721 SLF2Q8IX21 1173 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 RTF1Q92541 710 aaKnown RBP7.55□□□□□ -1.2
VPS8-214ENST00000458721 RSPH6AQ9H0K4 717 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 NUDCQ9Y266 331 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 LTBP1Q14766 1721 aa7.55□□□□□ -1.2
VPS8-214ENST00000458721 DDX60Q8IY21 1712 aaKnown RBP7.55□□□□□ -1.2
VPS8-214ENST00000458721 CDHR2Q9BYE9 1310 aa7.54□□□□□ -1.2
VPS8-214ENST00000458721 ERVV-1B6SEH8 477 aa7.54□□□□□ -1.2
VPS8-214ENST00000458721 PRKAR2BP31323 418 aa7.54□□□□□ -1.2
VPS8-214ENST00000458721 VEGFBP49765 207 aa7.54□□□□□ -1.2
VPS8-214ENST00000458721 CC2D1BQ5T0F9 858 aaKnown RBP7.54□□□□□ -1.2
VPS8-214ENST00000458721 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
VPS8-214ENST00000458721 VPS33BQ9H267 617 aa7.54□□□□□ -1.2
VPS8-214ENST00000458721 NIP7Q9Y221 180 aaKnown RBP eCLIP7.54□□□□□ -1.2
VPS8-214ENST00000458721 ERBB4Q15303 1308 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 RNF123Q5XPI4 1314 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 ZNF541Q9H0D2 1346 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 LRRC37AA6NMS7 1700 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 CA12O43570 354 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 LMOD1P29536 600 aaPredicted RBP7.53□□□□□ -1.2
VPS8-214ENST00000458721 HOXA10P31260 410 aaPredicted RBP7.53□□□□□ -1.2
VPS8-214ENST00000458721 ECE1P42892 770 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 EAPPQ56P03 285 aaPredicted RBP7.53□□□□□ -1.2
VPS8-214ENST00000458721 USP16Q9Y5T5 823 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
VPS8-214ENST00000458721 LAMB2P55268 1798 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 COL4A5P29400 1685 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 ABCC12Q96J65 1359 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 DNAJB2P25686 324 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 EIF6P56537 245 aaKnown RBP7.52□□□□□ -1.21
VPS8-214ENST00000458721 DEFB115Q30KQ5 88 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 USP50Q70EL3 339 aaPredicted RBP7.52□□□□□ -1.21
VPS8-214ENST00000458721 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 CCDC24Q8N4L8 307 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 PNISRQ8TF01 805 aaKnown RBP7.52□□□□□ -1.21
VPS8-214ENST00000458721 HHIPL1Q96JK4 782 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 PCGF6Q9BYE7 350 aa7.52□□□□□ -1.21
VPS8-214ENST00000458721 DDX21Q9NR30 783 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS8-214ENST00000458721 ZNF277Q9NRM2 450 aaPredicted RBP7.52□□□□□ -1.21
VPS8-214ENST00000458721 WDR33Q9C0J8 1336 aaKnown RBP7.52□□□□□ -1.21
VPS8-214ENST00000458721 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
VPS8-214ENST00000458721 TJAP1Q5JTD0 557 aa7.51□□□□□ -1.21
VPS8-214ENST00000458721 RBM26Q5T8P6 1007 aaKnown RBP7.51□□□□□ -1.21
VPS8-214ENST00000458721 KIF6Q6ZMV9 814 aa7.51□□□□□ -1.21
VPS8-214ENST00000458721 RPGRQ92834 1020 aaKnown RBP7.51□□□□□ -1.21
VPS8-214ENST00000458721 PHACTR3Q96KR7 559 aa7.51□□□□□ -1.21
VPS8-214ENST00000458721 CRAMP1Q96RY5 1269 aa7.51□□□□□ -1.21
VPS8-214ENST00000458721 BEGAINQ9BUH8 593 aa7.51□□□□□ -1.21
VPS8-214ENST00000458721 IL21Q9HBE4 155 aa7.51□□□□□ -1.21
VPS8-214ENST00000458721 MAP3K15Q6ZN16 1313 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms