RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DICER1Q9UPY3 1922 aaKnown RBP20.29■□□□□ 0.84
CD28-203ENST00000458610 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
CD28-203ENST00000458610 G3V3G9 751 aa20.29■□□□□ 0.84
CD28-203ENST00000458610 TOMM70O94826 608 aa20.29■□□□□ 0.84
CD28-203ENST00000458610 DDNO94850 711 aaPredicted RBP20.29■□□□□ 0.84
CD28-203ENST00000458610 DCAF8Q5TAQ9 597 aa20.29■□□□□ 0.84
CD28-203ENST00000458610 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
CD28-203ENST00000458610 POLLQ9UGP5 575 aa20.29■□□□□ 0.84
CD28-203ENST00000458610 UFL1O94874 794 aa20.28■□□□□ 0.84
CD28-203ENST00000458610 UBTFL1P0CB47 393 aaPredicted RBP20.28■□□□□ 0.84
CD28-203ENST00000458610 C1QTNF8P60827 252 aa20.28■□□□□ 0.84
CD28-203ENST00000458610 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
CD28-203ENST00000458610 SLC51AQ86UW1 340 aa20.28■□□□□ 0.84
CD28-203ENST00000458610 TNIP1Q15025 636 aa20.27■□□□□ 0.84
CD28-203ENST00000458610 L3MBTL3Q96JM7 780 aaPredicted RBP20.27■□□□□ 0.84
CD28-203ENST00000458610 LEMD3Q9Y2U8 911 aa20.27■□□□□ 0.84
CD28-203ENST00000458610 MYH3P11055 1940 aa20.26■□□□□ 0.83
CD28-203ENST00000458610 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
CD28-203ENST00000458610 GNAI3P08754 354 aa20.26■□□□□ 0.83
CD28-203ENST00000458610 TRIM27P14373 513 aa20.26■□□□□ 0.83
CD28-203ENST00000458610 RABL6Q3YEC7 729 aaPredicted RBP20.26■□□□□ 0.83
CD28-203ENST00000458610 LDHAL6AQ6ZMR3 332 aa20.26■□□□□ 0.83
CD28-203ENST00000458610 BICC1Q9H694 974 aaKnown RBP20.26■□□□□ 0.83
CD28-203ENST00000458610 TAF1P21675 1872 aa20.26■□□□□ 0.83
CD28-203ENST00000458610 ZNF541Q9H0D2 1346 aa20.26■□□□□ 0.83
CD28-203ENST00000458610 TIAM2Q8IVF5 1701 aa20.25■□□□□ 0.83
CD28-203ENST00000458610 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
CD28-203ENST00000458610 CNNM1Q9NRU3 951 aa20.25■□□□□ 0.83
CD28-203ENST00000458610 GJA3Q9Y6H8 435 aa20.25■□□□□ 0.83
CD28-203ENST00000458610 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
CD28-203ENST00000458610 MS4A1P11836 297 aa20.24■□□□□ 0.83
CD28-203ENST00000458610 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
CD28-203ENST00000458610 KCNJ4P48050 445 aa20.24■□□□□ 0.83
CD28-203ENST00000458610 CIAPIN1Q6FI81 312 aa20.24■□□□□ 0.83
CD28-203ENST00000458610 RBM46Q8TBY0 533 aaKnown RBP20.24■□□□□ 0.83
CD28-203ENST00000458610 CHRNDQ07001 517 aa20.23■□□□□ 0.83
CD28-203ENST00000458610 CXCL9Q07325 125 aa20.23■□□□□ 0.83
CD28-203ENST00000458610 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
CD28-203ENST00000458610 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
CD28-203ENST00000458610 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
CD28-203ENST00000458610 CLUAP1Q96AJ1 413 aa20.22■□□□□ 0.83
CD28-203ENST00000458610 ZNF804BA4D1E1 1349 aa20.22■□□□□ 0.83
CD28-203ENST00000458610 POTECB2RU33 542 aa20.21■□□□□ 0.83
CD28-203ENST00000458610 ECE2O60344 883 aa20.21■□□□□ 0.83
CD28-203ENST00000458610 FSTL1Q12841 308 aa20.21■□□□□ 0.83
CD28-203ENST00000458610 PODNQ7Z5L7 613 aa20.21■□□□□ 0.83
CD28-203ENST00000458610 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
CD28-203ENST00000458610 SMC1BQ8NDV3 1235 aa20.21■□□□□ 0.83
CD28-203ENST00000458610 ZNF594Q96JF6 807 aaPredicted RBP20.21■□□□□ 0.83
CD28-203ENST00000458610 DBNDD1Q9H9R9 158 aa20.21■□□□□ 0.83
CD28-203ENST00000458610 WDR90Q96KV7 1748 aa20.2■□□□□ 0.82
CD28-203ENST00000458610 RAD17O75943 681 aa20.2■□□□□ 0.82
CD28-203ENST00000458610 DOK7Q18PE1 504 aa20.2■□□□□ 0.82
CD28-203ENST00000458610 PNMA8AQ86V59 439 aaPredicted RBP20.2■□□□□ 0.82
CD28-203ENST00000458610 RCAN3Q9UKA8 241 aa20.2■□□□□ 0.82
CD28-203ENST00000458610 MED23Q9ULK4 1368 aa20.2■□□□□ 0.82
CD28-203ENST00000458610 COL4A1P02462 1669 aa20.19■□□□□ 0.82
CD28-203ENST00000458610 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
CD28-203ENST00000458610 DUOX1Q9NRD9 1551 aa20.19■□□□□ 0.82
CD28-203ENST00000458610 MROH5Q6ZUA9 1318 aa20.19■□□□□ 0.82
CD28-203ENST00000458610 EPHX2P34913 555 aa20.18■□□□□ 0.82
CD28-203ENST00000458610 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
CD28-203ENST00000458610 MEIS3Q99687 375 aa20.18■□□□□ 0.82
CD28-203ENST00000458610 COA1Q9GZY4 146 aa20.18■□□□□ 0.82
CD28-203ENST00000458610 LRRFIP2Q9Y608 721 aaKnown RBP20.18■□□□□ 0.82
CD28-203ENST00000458610 COL4A5P29400 1685 aa20.17■□□□□ 0.82
CD28-203ENST00000458610 YDJCA8MPS7 323 aa20.17■□□□□ 0.82
CD28-203ENST00000458610 PLIN1O60240 522 aa20.17■□□□□ 0.82
CD28-203ENST00000458610 GNAI2P04899 355 aa20.17■□□□□ 0.82
CD28-203ENST00000458610 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
CD28-203ENST00000458610 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
CD28-203ENST00000458610 TAF5LO75529 589 aa20.16■□□□□ 0.82
CD28-203ENST00000458610 RPS12P25398 132 aaKnown RBP20.16■□□□□ 0.82
CD28-203ENST00000458610 C15orf52Q6ZUT6 534 aaKnown RBP20.16■□□□□ 0.82
CD28-203ENST00000458610 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.16■□□□□ 0.82
CD28-203ENST00000458610 HELBQ8NG08 1087 aaPredicted RBP20.16■□□□□ 0.82
CD28-203ENST00000458610 DPF2Q92785 391 aa20.16■□□□□ 0.82
CD28-203ENST00000458610 RIPOR2Q9Y4F9 1068 aa20.16■□□□□ 0.82
CD28-203ENST00000458610 GMPSP49915 693 aaPredicted RBP20.15■□□□□ 0.82
CD28-203ENST00000458610 UBE4AQ14139 1066 aa20.15■□□□□ 0.82
CD28-203ENST00000458610 LDHDQ86WU2 507 aa20.15■□□□□ 0.82
CD28-203ENST00000458610 GPRC5DQ9NZD1 345 aa20.15■□□□□ 0.82
CD28-203ENST00000458610 LTBP1Q14766 1721 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 H7C1D1 291 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 PSMD14O00487 310 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 SCNN1DP51172 638 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 EAPPQ56P03 285 aaPredicted RBP20.14■□□□□ 0.81
CD28-203ENST00000458610 METTL24Q5JXM2 366 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 CHADLQ6NUI6 762 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 USP50Q70EL3 339 aaPredicted RBP20.14■□□□□ 0.81
CD28-203ENST00000458610 ITPRIPQ8IWB1 547 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 PUS3Q9BZE2 481 aaKnown RBP20.14■□□□□ 0.81
CD28-203ENST00000458610 TNNQ9UQP3 1299 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 CLEC11AQ9Y240 323 aa20.14■□□□□ 0.81
CD28-203ENST00000458610 USP17L3A6NCW0 530 aa20.13■□□□□ 0.81
CD28-203ENST00000458610 USP17L4A6NCW7 530 aa20.13■□□□□ 0.81
CD28-203ENST00000458610 EYA2O00167 538 aa20.13■□□□□ 0.81
CD28-203ENST00000458610 VIL1P09327 827 aaKnown RBP20.13■□□□□ 0.81
CD28-203ENST00000458610 USP17L1Q7RTZ2 530 aa20.13■□□□□ 0.81
CD28-203ENST00000458610 ZNF804AQ7Z570 1209 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms