RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 CCZ1BP86790 482 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 SYCP1Q15431 976 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 FSIP1Q8NA03 581 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 ZBTB9Q96C00 473 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 USP28Q96RU2 1077 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 HIP1O00291 1037 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 RBM6P78332 1123 aaKnown RBP13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 SCRN1Q12765 414 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 ZRSR1Q15695 479 aaKnown RBP13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 SLU7O95391 586 aaKnown RBP13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 PTPN21Q16825 1174 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
UBE2L3-202ENST00000458578 A0A1B0GVL5 298 aa13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 TAF5LO75529 589 aa13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 APOBRQ0VD83 1088 aa13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 SNW1Q13573 536 aaKnown RBP13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 NYAP1Q6ZVC0 841 aa13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 DHX40Q8IX18 779 aaKnown RBP13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 PLEKHO1Q53GL0 409 aaPredicted RBP13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 DDX46Q7L014 1031 aaKnown RBP13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 TMC6Q7Z403 805 aa13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 MRFAP1L1Q96HT8 127 aa13.55□□□□□ -0.24
UBE2L3-202ENST00000458578 NPHP4O75161 1426 aaPredicted RBP13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 CEP57L1Q8IYX8 460 aa13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 FAM177A1Q8N128 213 aaPredicted RBP13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 ERO1AQ96HE7 468 aa13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
UBE2L3-202ENST00000458578 GRM8O00222 908 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 CYP21A2P08686 494 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 KSR2Q6VAB6 950 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 RAB11FIP4Q86YS3 637 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 ZNF446Q9NWS9 450 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 POLR3GO15318 223 aaPredicted RBP13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 ORAI2Q96SN7 254 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 CDC25BP30305 580 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 SF3A1Q15459 793 aaKnown RBP13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 NWD1Q149M9 1564 aa13.53□□□□□ -0.24
UBE2L3-202ENST00000458578 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.24
UBE2L3-202ENST00000458578 A0A0G2JLW4 131 aa13.52□□□□□ -0.24
UBE2L3-202ENST00000458578 NEMFO60524 1076 aa13.52□□□□□ -0.24
UBE2L3-202ENST00000458578 MTX1Q13505 466 aa13.52□□□□□ -0.24
UBE2L3-202ENST00000458578 DPCR1Q3MIW9 517 aa13.52□□□□□ -0.24
UBE2L3-202ENST00000458578 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.24
UBE2L3-202ENST00000458578 ZSCAN16Q9H4T2 348 aaPredicted RBP13.52□□□□□ -0.24
UBE2L3-202ENST00000458578 PDIA4P13667 645 aaKnown RBP13.52□□□□□ -0.25
UBE2L3-202ENST00000458578 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.25
UBE2L3-202ENST00000458578 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.25
UBE2L3-202ENST00000458578 ARHGAP29Q52LW3 1261 aa13.52□□□□□ -0.25
UBE2L3-202ENST00000458578 SARM1Q6SZW1 724 aa13.52□□□□□ -0.25
UBE2L3-202ENST00000458578 E4F1Q66K89 784 aaPredicted RBP13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 COL15A1P39059 1388 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 ERBB3P21860 1342 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 CCDC66A2RUB6 948 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 LMOD1P29536 600 aaPredicted RBP13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 ADD1P35611 737 aaKnown RBP13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 FAM160A1Q05DH4 1040 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 GOLGA8FQ08AF8 430 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 GOLGA8DPQ0D2H9 430 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 DNAI1Q9UI46 699 aa13.51□□□□□ -0.25
UBE2L3-202ENST00000458578 CAVIN2O95810 425 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 GCP02774 474 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 SFPQP23246 707 aaKnown RBP eCLIP13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 TAF3Q5VWG9 929 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 STOX1Q6ZVD7 989 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 PPP1R13BQ96KQ4 1090 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 TMEM51Q9NW97 253 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 KRT32Q14532 448 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 NSUN7Q8NE18 718 aaKnown RBP13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 EPC1Q9H2F5 836 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 MED23Q9ULK4 1368 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 CTAGE5O15320 804 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 TFCP2Q12800 502 aa13.5□□□□□ -0.25
UBE2L3-202ENST00000458578 HSP90AA4PQ58FG1 418 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms