RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 MAP4K1Q92918 833 aa13.72□□□□□ -0.21
TCF4-204ENST00000457482 SMARCC1Q92922 1105 aaPredicted RBP13.72□□□□□ -0.21
TCF4-204ENST00000457482 SNRKQ9NRH2 765 aa13.72□□□□□ -0.21
TCF4-204ENST00000457482 RIPOR2Q9Y4F9 1068 aa13.72□□□□□ -0.21
TCF4-204ENST00000457482 SPATA31A6Q5VVP1 1343 aa13.72□□□□□ -0.21
TCF4-204ENST00000457482 PDE8AO60658 829 aa13.72□□□□□ -0.21
TCF4-204ENST00000457482 LDHAL6AQ6ZMR3 332 aa13.72□□□□□ -0.21
TCF4-204ENST00000457482 PAG1Q9NWQ8 432 aa13.72□□□□□ -0.21
TCF4-204ENST00000457482 BTAF1O14981 1849 aa13.71□□□□□ -0.21
TCF4-204ENST00000457482 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
TCF4-204ENST00000457482 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
TCF4-204ENST00000457482 TTC14Q96N46 770 aa13.71□□□□□ -0.21
TCF4-204ENST00000457482 THSD7AQ9UPZ6 1657 aa13.71□□□□□ -0.21
TCF4-204ENST00000457482 ANKRD18BA2A2Z9 1011 aa13.71□□□□□ -0.22
TCF4-204ENST00000457482 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.22
TCF4-204ENST00000457482 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.22
TCF4-204ENST00000457482 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.22
TCF4-204ENST00000457482 DDX60Q8IY21 1712 aaKnown RBP13.7□□□□□ -0.22
TCF4-204ENST00000457482 HAX1O00165 279 aa13.7□□□□□ -0.22
TCF4-204ENST00000457482 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
TCF4-204ENST00000457482 KCNJ4P48050 445 aa13.7□□□□□ -0.22
TCF4-204ENST00000457482 AK2P54819 239 aa13.7□□□□□ -0.22
TCF4-204ENST00000457482 SCARF1Q14162 830 aa13.7□□□□□ -0.22
TCF4-204ENST00000457482 GSE1Q14687 1217 aa13.7□□□□□ -0.22
TCF4-204ENST00000457482 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
TCF4-204ENST00000457482 MEX3CQ5U5Q3 659 aaKnown RBP13.7□□□□□ -0.22
TCF4-204ENST00000457482 KCNB2Q92953 911 aa13.7□□□□□ -0.22
TCF4-204ENST00000457482 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
TCF4-204ENST00000457482 SLC27A2O14975 620 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 TAF5LO75529 589 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 PI16Q6UXB8 463 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 MCM2P49736 904 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 FKBP4Q02790 459 aaKnown RBP eCLIP13.69□□□□□ -0.22
TCF4-204ENST00000457482 CUL4AQ13619 759 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 BCORQ6W2J9 1755 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 RUFY3Q7L099 469 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
TCF4-204ENST00000457482 SH3TC1Q8TE82 1336 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
TCF4-204ENST00000457482 SEC31BQ9NQW1 1179 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 SPEF2Q9C093 1822 aa13.69□□□□□ -0.22
TCF4-204ENST00000457482 AFF2P51816 1311 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
TCF4-204ENST00000457482 ATP2B3Q16720 1220 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 GORABQ5T7V8 394 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 VGLL2Q8N8G2 317 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 AKAP2Q9Y2D5 859 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 ZDHHC9Q9Y397 364 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 DTNBO60941 627 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 NTSR2O95665 410 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
TCF4-204ENST00000457482 COL4A1P02462 1669 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
TCF4-204ENST00000457482 SNAP23O00161 211 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 LARGE1O95461 756 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 TTC39AQ5SRH9 613 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
TCF4-204ENST00000457482 AKAP11Q9UKA4 1901 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 RFX7Q2KHR2 1363 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
TCF4-204ENST00000457482 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 CCDC158Q5M9N0 1113 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 ZSWIM6Q9HCJ5 1215 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 TAF1P21675 1872 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
TCF4-204ENST00000457482 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
TCF4-204ENST00000457482 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
TCF4-204ENST00000457482 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
TCF4-204ENST00000457482 FOXD4L5Q5VV16 416 aaPredicted RBP13.66□□□□□ -0.22
TCF4-204ENST00000457482 FOXD4L4Q8WXT5 416 aaPredicted RBP13.66□□□□□ -0.22
TCF4-204ENST00000457482 ZAP70P43403 619 aa13.66□□□□□ -0.22
TCF4-204ENST00000457482 PARP10Q53GL7 1025 aa13.66□□□□□ -0.22
TCF4-204ENST00000457482 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
TCF4-204ENST00000457482 PDRG1Q9NUG6 133 aa13.66□□□□□ -0.22
TCF4-204ENST00000457482 LRP5O75197 1615 aa13.66□□□□□ -0.22
TCF4-204ENST00000457482 SBF2Q86WG5 1849 aa13.66□□□□□ -0.22
TCF4-204ENST00000457482 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
TCF4-204ENST00000457482 TRAK2O60296 914 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 PDE8BO95263 885 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 C3orf67Q6ZVT6 689 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 GZF1Q9H116 711 aaPredicted RBP13.65□□□□□ -0.22
TCF4-204ENST00000457482 SRP68Q9UHB9 627 aaKnown RBP13.65□□□□□ -0.22
TCF4-204ENST00000457482 CASZ1Q86V15 1759 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
TCF4-204ENST00000457482 MCAMP43121 646 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 NUCB2P80303 420 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 ZMYM1Q5SVZ6 1142 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.65□□□□□ -0.22
TCF4-204ENST00000457482 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
TCF4-204ENST00000457482 MAST3O60307 1309 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms