RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 CTIFO43310 598 aaKnown RBP20.85■□□□□ 0.93
PTPN6-204ENST00000456013 SCRN1Q12765 414 aa20.85■□□□□ 0.93
PTPN6-204ENST00000456013 SEC62Q99442 399 aaKnown RBP20.85■□□□□ 0.93
PTPN6-204ENST00000456013 ZSCAN25Q6NSZ9 544 aa20.84■□□□□ 0.93
PTPN6-204ENST00000456013 LMOD2Q6P5Q4 547 aa20.84■□□□□ 0.93
PTPN6-204ENST00000456013 DDX11Q96FC9 970 aa20.84■□□□□ 0.93
PTPN6-204ENST00000456013 DNAJC2Q99543 621 aaKnown RBP20.84■□□□□ 0.93
PTPN6-204ENST00000456013 DBNDD2Q9BQY9 259 aa20.84■□□□□ 0.93
PTPN6-204ENST00000456013 NRBP1Q9UHY1 535 aa20.84■□□□□ 0.93
PTPN6-204ENST00000456013 PFKFB2O60825 505 aa20.83■□□□□ 0.93
PTPN6-204ENST00000456013 HMGB1P09429 215 aaKnown RBP20.83■□□□□ 0.93
PTPN6-204ENST00000456013 CDC25BP30305 580 aa20.83■□□□□ 0.93
PTPN6-204ENST00000456013 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.93
PTPN6-204ENST00000456013 NDUFB9Q9Y6M9 179 aa20.83■□□□□ 0.93
PTPN6-204ENST00000456013 SH3TC1Q8TE82 1336 aa20.83■□□□□ 0.93
PTPN6-204ENST00000456013 LRMPQ12912 555 aa20.83■□□□□ 0.93
PTPN6-204ENST00000456013 NAA16Q6N069 864 aaPredicted RBP20.83■□□□□ 0.93
PTPN6-204ENST00000456013 ZNF496Q96IT1 587 aaPredicted RBP20.83■□□□□ 0.93
PTPN6-204ENST00000456013 CHGBP05060 677 aa20.82■□□□□ 0.92
PTPN6-204ENST00000456013 ADD1P35611 737 aaKnown RBP20.82■□□□□ 0.92
PTPN6-204ENST00000456013 RAPGEF4Q8WZA2 1011 aa20.82■□□□□ 0.92
PTPN6-204ENST00000456013 ANKRD7Q92527 254 aa20.82■□□□□ 0.92
PTPN6-204ENST00000456013 PHKG2P15735 406 aa20.82■□□□□ 0.92
PTPN6-204ENST00000456013 UBE3BQ7Z3V4 1068 aa20.82■□□□□ 0.92
PTPN6-204ENST00000456013 KBTBD3Q8NAB2 608 aa20.82■□□□□ 0.92
PTPN6-204ENST00000456013 RCOR1Q9UKL0 485 aa20.82■□□□□ 0.92
PTPN6-204ENST00000456013 ZNF142P52746 1687 aaPredicted RBP20.82■□□□□ 0.92
PTPN6-204ENST00000456013 CTAGE5O15320 804 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
PTPN6-204ENST00000456013 STOX1Q6ZVD7 989 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 DHX32Q7L7V1 743 aaKnown RBP20.81■□□□□ 0.92
PTPN6-204ENST00000456013 NSUN7Q8NE18 718 aaKnown RBP20.81■□□□□ 0.92
PTPN6-204ENST00000456013 CLIP2Q9UDT6 1046 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 PRDM4Q9UKN5 801 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 USP16Q9Y5T5 823 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 IQCB1Q15051 598 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 SARM1Q6SZW1 724 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 DDX46Q7L014 1031 aaKnown RBP20.81■□□□□ 0.92
PTPN6-204ENST00000456013 PALLDQ8WX93 1383 aa20.81■□□□□ 0.92
PTPN6-204ENST00000456013 FGD1P98174 961 aa20.8■□□□□ 0.92
PTPN6-204ENST00000456013 PPP4R3BQ5MIZ7 849 aa20.8■□□□□ 0.92
PTPN6-204ENST00000456013 LRRC2Q9BYS8 371 aa20.8■□□□□ 0.92
PTPN6-204ENST00000456013 AGXT2Q9BYV1 514 aa20.8■□□□□ 0.92
PTPN6-204ENST00000456013 CASP7P55210 303 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 ATL3Q6DD88 541 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 TICAM2Q86XR7 235 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 PDCL2Q8N4E4 241 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 HELLSQ9NRZ9 838 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 A0A087WZG4 1122 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 CTDNEP1O95476 244 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 TATP17735 454 aaPredicted RBP20.79■□□□□ 0.92
PTPN6-204ENST00000456013 KRT28Q7Z3Y7 464 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 CACTINQ8WUQ7 758 aaKnown RBP20.79■□□□□ 0.92
PTPN6-204ENST00000456013 DSCC1Q9BVC3 393 aa20.79■□□□□ 0.92
PTPN6-204ENST00000456013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.92
PTPN6-204ENST00000456013 MST1RQ04912 1400 aa20.78■□□□□ 0.92
PTPN6-204ENST00000456013 GOLGA6L19H0YKK7 550 aa20.78■□□□□ 0.92
PTPN6-204ENST00000456013 EXOSC10Q01780 885 aaKnown RBP20.78■□□□□ 0.92
PTPN6-204ENST00000456013 CCAR1Q8IX12 1150 aaKnown RBP20.78■□□□□ 0.92
PTPN6-204ENST00000456013 SMTNL1A8MU46 457 aa20.78■□□□□ 0.92
PTPN6-204ENST00000456013 STX1AQ16623 288 aa20.78■□□□□ 0.92
PTPN6-204ENST00000456013 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
PTPN6-204ENST00000456013 KIF1AQ12756 1690 aa20.78■□□□□ 0.92
PTPN6-204ENST00000456013 ABCC6O95255 1503 aa20.77■□□□□ 0.92
PTPN6-204ENST00000456013 PTPDC1A2A3K4 754 aa20.77■□□□□ 0.92
PTPN6-204ENST00000456013 CEBPZQ03701 1054 aaKnown RBP20.77■□□□□ 0.92
PTPN6-204ENST00000456013 SYCP1Q15431 976 aa20.77■□□□□ 0.92
PTPN6-204ENST00000456013 CCDC144BQ3MJ40 725 aa20.77■□□□□ 0.92
PTPN6-204ENST00000456013 C11orf57Q6ZUT1 292 aaPredicted RBP20.77■□□□□ 0.92
PTPN6-204ENST00000456013 CCDC144CPQ8IYA2 1237 aa20.77■□□□□ 0.92
PTPN6-204ENST00000456013 TTC5Q8N0Z6 440 aa20.77■□□□□ 0.92
PTPN6-204ENST00000456013 MRFAP1L1Q96HT8 127 aa20.77■□□□□ 0.92
PTPN6-204ENST00000456013 C16orf45Q96MC5 204 aaPredicted RBP20.77■□□□□ 0.92
PTPN6-204ENST00000456013 TNNT1P13805 278 aa20.77■□□□□ 0.91
PTPN6-204ENST00000456013 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.91
PTPN6-204ENST00000456013 APOBRQ0VD83 1088 aa20.77■□□□□ 0.91
PTPN6-204ENST00000456013 FMNL2Q96PY5 1086 aa20.77■□□□□ 0.91
PTPN6-204ENST00000456013 ALS2Q96Q42 1657 aa20.76■□□□□ 0.91
PTPN6-204ENST00000456013 LAMB4A4D0S4 1761 aa20.76■□□□□ 0.91
PTPN6-204ENST00000456013 ATP5J2-PTCD1G3V325 749 aa20.76■□□□□ 0.91
PTPN6-204ENST00000456013 PTCD1O75127 700 aaKnown RBP20.76■□□□□ 0.91
PTPN6-204ENST00000456013 SNW1Q13573 536 aaKnown RBP20.76■□□□□ 0.91
PTPN6-204ENST00000456013 ZNF396Q96N95 335 aaPredicted RBP20.76■□□□□ 0.91
PTPN6-204ENST00000456013 GOLPH3LQ9H4A5 285 aa20.76■□□□□ 0.91
PTPN6-204ENST00000456013 NLRP2Q9NX02 1062 aa20.76■□□□□ 0.91
PTPN6-204ENST00000456013 SALL1Q9NSC2 1324 aa20.76■□□□□ 0.91
PTPN6-204ENST00000456013 ZC3H6P61129 1189 aaKnown RBP20.75■□□□□ 0.91
PTPN6-204ENST00000456013 ATP2B3Q16720 1220 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 LMBR1LQ6UX01 489 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 CCDC73Q6ZRK6 1079 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 PLBD2Q8NHP8 589 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 USP28Q96RU2 1077 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 PAG1Q9NWQ8 432 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 PAXBP1Q9Y5B6 917 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 MEGF6O75095 1541 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 NEMFO60524 1076 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 ENGASEQ8NFI3 743 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 GPR108Q9NPR9 543 aa20.75■□□□□ 0.91
PTPN6-204ENST00000456013 ZMYM1Q5SVZ6 1142 aa20.74■□□□□ 0.91
PTPN6-204ENST00000456013 LRRC8AQ8IWT6 810 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms