RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 METTL24Q5JXM2 366 aa11.21□□□□□ -0.61
VSIG4-204ENST00000455586 TRAPPC3LQ5T215 181 aa11.21□□□□□ -0.61
VSIG4-204ENST00000455586 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
VSIG4-204ENST00000455586 FAM227BQ96M60 508 aa11.21□□□□□ -0.61
VSIG4-204ENST00000455586 RIPOR2Q9Y4F9 1068 aa11.21□□□□□ -0.61
VSIG4-204ENST00000455586 COL4A1P02462 1669 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.62
VSIG4-204ENST00000455586 TAF5LO75529 589 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 GTF2E1P29083 439 aaPredicted RBP11.21□□□□□ -0.62
VSIG4-204ENST00000455586 MCM4P33991 863 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 RFC4P35249 363 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 CLEC4GQ6UXB4 293 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 SLC51AQ86UW1 340 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 FSD1Q9BTV5 496 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 SNRKQ9NRH2 765 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 FBXO3Q9UK99 471 aa11.21□□□□□ -0.62
VSIG4-204ENST00000455586 ZNF609O15014 1411 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 ABCC12Q96J65 1359 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 APBA3O96018 575 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 TXNRD1Q16881 649 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 PI16Q6UXB8 463 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 CWC22Q9HCG8 908 aaKnown RBP11.2□□□□□ -0.62
VSIG4-204ENST00000455586 DDX11L8A8MPP1 907 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 GSE1Q14687 1217 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 XAGE2Q96GT9 111 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 GBP4Q96PP9 640 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
VSIG4-204ENST00000455586 MYH3P11055 1940 aa11.19□□□□□ -0.62
VSIG4-204ENST00000455586 RIC1Q4ADV7 1423 aa11.19□□□□□ -0.62
VSIG4-204ENST00000455586 LY75O60449 1722 aa11.19□□□□□ -0.62
VSIG4-204ENST00000455586 C4BP0C0L5 1744 aa11.19□□□□□ -0.62
VSIG4-204ENST00000455586 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
VSIG4-204ENST00000455586 ZNF831Q5JPB2 1677 aa11.19□□□□□ -0.62
VSIG4-204ENST00000455586 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
VSIG4-204ENST00000455586 SCARF1Q14162 830 aa11.19□□□□□ -0.62
VSIG4-204ENST00000455586 NBPF5PQ86XG9 351 aaPredicted RBP11.19□□□□□ -0.62
VSIG4-204ENST00000455586 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
VSIG4-204ENST00000455586 A0A0D9SFI3 127 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 GOLIM4O00461 696 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 SEC62Q99442 399 aaKnown RBP11.18□□□□□ -0.62
VSIG4-204ENST00000455586 HAUS7Q99871 368 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 TAF1LQ8IZX4 1826 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 MED23Q9ULK4 1368 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 SPEF2Q9C093 1822 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 NUCB2P80303 420 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 FKBP4Q02790 459 aaKnown RBP eCLIP11.18□□□□□ -0.62
VSIG4-204ENST00000455586 PTH1RQ03431 593 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 GORABQ5T7V8 394 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 TMX3Q96JJ7 454 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 UPF3BQ9BZI7 483 aaKnown RBP11.18□□□□□ -0.62
VSIG4-204ENST00000455586 TAF1P21675 1872 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 BCORQ6W2J9 1755 aa11.18□□□□□ -0.62
VSIG4-204ENST00000455586 NFIXQ14938 502 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 ATP2B3Q16720 1220 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 ZNF827Q17R98 1081 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 CCDC152Q4G0S7 254 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 VGLL2Q8N8G2 317 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
VSIG4-204ENST00000455586 NPHP1O15259 732 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 IFIT1P09914 478 aaKnown RBP11.17□□□□□ -0.62
VSIG4-204ENST00000455586 CCDC129Q6ZRS4 1044 aa11.17□□□□□ -0.62
VSIG4-204ENST00000455586 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
VSIG4-204ENST00000455586 CELF1Q92879 486 aaKnown RBP11.17□□□□□ -0.62
VSIG4-204ENST00000455586 PDE8BO95263 885 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 PTMSP20962 102 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 CUL4AQ13619 759 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 TTC39AQ5SRH9 613 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 KCNB2Q92953 911 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 INTS4Q96HW7 963 aaKnown RBP11.16□□□□□ -0.62
VSIG4-204ENST00000455586 AKAP2Q9Y2D5 859 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 GYS1P13807 737 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 ZKSCAN1P17029 563 aaPredicted RBP11.16□□□□□ -0.62
VSIG4-204ENST00000455586 CLEC17AQ6ZS10 378 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 MAP4K1Q92918 833 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 PAG1Q9NWQ8 432 aa11.16□□□□□ -0.62
VSIG4-204ENST00000455586 IGHMBP2P38935 993 aaKnown RBP11.15□□□□□ -0.62
VSIG4-204ENST00000455586 ZAP70P43403 619 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 PHKA1P46020 1223 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 KCNJ4P48050 445 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 NECTIN1Q15223 517 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 SLC27A3Q5K4L6 730 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 RNF20Q5VTR2 975 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
VSIG4-204ENST00000455586 ZGPATQ8N5A5 531 aaKnown RBP11.15□□□□□ -0.62
VSIG4-204ENST00000455586 KBTBD3Q8NAB2 608 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 TM6SF1Q9BZW5 370 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 TFCP2L1Q9NZI6 479 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 RBM8AQ9Y5S9 174 aaKnown RBP11.15□□□□□ -0.62
VSIG4-204ENST00000455586 LRP5O75197 1615 aa11.15□□□□□ -0.62
VSIG4-204ENST00000455586 UTRNP46939 3433 aa11.15□□□□□ -0.63
VSIG4-204ENST00000455586 SCN7AQ01118 1682 aa11.15□□□□□ -0.63
VSIG4-204ENST00000455586 CYP2E1P05181 493 aaPredicted RBP11.14□□□□□ -0.63
VSIG4-204ENST00000455586 SSFA2P28290 1259 aa11.14□□□□□ -0.63
VSIG4-204ENST00000455586 CHRNDQ07001 517 aa11.14□□□□□ -0.63
VSIG4-204ENST00000455586 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms