RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 FZD5Q13467 585 aa9.05□□□□□ -0.96
CUL3-208ENST00000454323 SETDB1Q15047 1291 aa9.05□□□□□ -0.96
CUL3-208ENST00000454323 DBNDD2Q9BQY9 259 aa9.05□□□□□ -0.96
CUL3-208ENST00000454323 PPME1Q9Y570 386 aa9.05□□□□□ -0.96
CUL3-208ENST00000454323 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
CUL3-208ENST00000454323 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
CUL3-208ENST00000454323 RTCBQ9Y3I0 505 aaKnown RBP9.04□□□□□ -0.96
CUL3-208ENST00000454323 WNT11O96014 354 aa9.03□□□□□ -0.96
CUL3-208ENST00000454323 SPINK2P20155 84 aa9.03□□□□□ -0.96
CUL3-208ENST00000454323 ZDHHC13Q8IUH4 622 aa9.03□□□□□ -0.96
CUL3-208ENST00000454323 ADAMTS19Q8TE59 1207 aa9.03□□□□□ -0.96
CUL3-208ENST00000454323 FAM177BA6PVY3 158 aa9.02□□□□□ -0.97
CUL3-208ENST00000454323 POM121CA8CG34 1229 aa9.02□□□□□ -0.97
CUL3-208ENST00000454323 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
CUL3-208ENST00000454323 RNF43Q68DV7 783 aa9.01□□□□□ -0.97
CUL3-208ENST00000454323 DTX1Q86Y01 620 aa9.01□□□□□ -0.97
CUL3-208ENST00000454323 AGGF1Q8N302 714 aaeCLIP9.01□□□□□ -0.97
CUL3-208ENST00000454323 J3QW42 95 aa9□□□□□ -0.97
CUL3-208ENST00000454323 CD68P34810 354 aaPredicted RBP9□□□□□ -0.97
CUL3-208ENST00000454323 ACAD11Q709F0 780 aa9□□□□□ -0.97
CUL3-208ENST00000454323 CMTR1Q8N1G2 835 aaKnown RBP9□□□□□ -0.97
CUL3-208ENST00000454323 GIMAP7Q8NHV1 300 aa9□□□□□ -0.97
CUL3-208ENST00000454323 POM121Q96HA1 1249 aa9□□□□□ -0.97
CUL3-208ENST00000454323 SPACA7Q96KW9 195 aa9□□□□□ -0.97
CUL3-208ENST00000454323 NSUN5Q96P11 429 aaKnown RBP9□□□□□ -0.97
CUL3-208ENST00000454323 QTRT2Q9H974 415 aaKnown RBP9□□□□□ -0.97
CUL3-208ENST00000454323 FAM196BA6NMK8 535 aa8.99□□□□□ -0.97
CUL3-208ENST00000454323 MED26O95402 600 aa8.99□□□□□ -0.97
CUL3-208ENST00000454323 DPYDQ12882 1025 aa8.99□□□□□ -0.97
CUL3-208ENST00000454323 UBL7Q96S82 380 aaPredicted RBP8.99□□□□□ -0.97
CUL3-208ENST00000454323 FAM13BQ9NYF5 915 aa8.99□□□□□ -0.97
CUL3-208ENST00000454323 MAFBQ9Y5Q3 323 aaPredicted RBP8.99□□□□□ -0.97
CUL3-208ENST00000454323 MMP20O60882 483 aa8.98□□□□□ -0.97
CUL3-208ENST00000454323 SMNDC1O75940 238 aaKnown RBP eCLIP8.98□□□□□ -0.97
CUL3-208ENST00000454323 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
CUL3-208ENST00000454323 RGL4Q8IZJ4 473 aa8.98□□□□□ -0.97
CUL3-208ENST00000454323 CCDC82Q8N4S0 544 aa8.98□□□□□ -0.97
CUL3-208ENST00000454323 KLHL23Q8NBE8 558 aa8.98□□□□□ -0.97
CUL3-208ENST00000454323 C7orf69Q9H7B7 122 aa8.98□□□□□ -0.97
CUL3-208ENST00000454323 PTK7Q13308 1070 aa8.97□□□□□ -0.97
CUL3-208ENST00000454323 LCE1DQ5T752 114 aa8.97□□□□□ -0.97
CUL3-208ENST00000454323 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
CUL3-208ENST00000454323 CLEC10AQ8IUN9 316 aa8.97□□□□□ -0.97
CUL3-208ENST00000454323 ARMC10Q8N2F6 343 aa8.97□□□□□ -0.97
CUL3-208ENST00000454323 MYRFLQ96LU7 910 aa8.97□□□□□ -0.97
CUL3-208ENST00000454323 HIF3AQ9Y2N7 669 aa8.97□□□□□ -0.97
CUL3-208ENST00000454323 SART1O43290 800 aaKnown RBP8.96□□□□□ -0.98
CUL3-208ENST00000454323 TREML1Q86YW5 311 aa8.96□□□□□ -0.98
CUL3-208ENST00000454323 FNBP4Q8N3X1 1017 aaPredicted RBP8.96□□□□□ -0.98
CUL3-208ENST00000454323 FAM46AQ96IP4 442 aaKnown RBP8.96□□□□□ -0.98
CUL3-208ENST00000454323 TFIP11Q9UBB9 837 aaKnown RBP8.96□□□□□ -0.98
CUL3-208ENST00000454323 TRIM33Q9UPN9 1127 aa8.96□□□□□ -0.98
CUL3-208ENST00000454323 USP17L15C9J2P7 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L10C9JJH3 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L13C9JLJ4 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L12C9JPN9 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L11C9JVI0 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L21D6R901 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L18D6R9N7 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L22D6RA61 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L17D6RBQ6 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 OPLAHO14841 1288 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 CDC27P30260 824 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
CUL3-208ENST00000454323 ARID1BQ8NFD5 2236 aaPredicted RBP8.95□□□□□ -0.98
CUL3-208ENST00000454323 WEE1P30291 646 aa8.94□□□□□ -0.98
CUL3-208ENST00000454323 HYAL2Q12891 473 aa8.94□□□□□ -0.98
CUL3-208ENST00000454323 DUOXA2Q1HG44 320 aa8.94□□□□□ -0.98
CUL3-208ENST00000454323 ANKRD34AQ69YU3 496 aa8.94□□□□□ -0.98
CUL3-208ENST00000454323 TRIM42Q8IWZ5 723 aa8.94□□□□□ -0.98
CUL3-208ENST00000454323 FAM83CQ9BQN1 747 aa8.94□□□□□ -0.98
CUL3-208ENST00000454323 LINC01387J3KSC0 135 aa8.93□□□□□ -0.98
CUL3-208ENST00000454323 PDIA4P13667 645 aaKnown RBP8.93□□□□□ -0.98
CUL3-208ENST00000454323 CPSF6Q16630 551 aaKnown RBP eCLIP8.93□□□□□ -0.98
CUL3-208ENST00000454323 CRTC2Q53ET0 693 aaPredicted RBP8.93□□□□□ -0.98
CUL3-208ENST00000454323 PROSER2Q86WR7 435 aaPredicted RBP8.93□□□□□ -0.98
CUL3-208ENST00000454323 ANGEL1Q9UNK9 670 aaKnown RBP8.93□□□□□ -0.98
CUL3-208ENST00000454323 FNDC3AQ9Y2H6 1198 aaKnown RBP8.93□□□□□ -0.98
CUL3-208ENST00000454323 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.92□□□□□ -0.98
CUL3-208ENST00000454323 FAM20CQ8IXL6 584 aa8.92□□□□□ -0.98
CUL3-208ENST00000454323 GLMNQ92990 594 aa8.92□□□□□ -0.98
CUL3-208ENST00000454323 KRTAP4-7Q9BYR0 210 aa8.92□□□□□ -0.98
CUL3-208ENST00000454323 VRTNQ9H8Y1 702 aa8.92□□□□□ -0.98
CUL3-208ENST00000454323 KCNMB2Q9Y691 235 aa8.92□□□□□ -0.98
CUL3-208ENST00000454323 HMX2A2RU54 273 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 PRR19A6NJB7 356 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 GALNT11Q8NCW6 608 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 OR13H1Q8NG92 308 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 SHKBP1Q8TBC3 707 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 WNT8BQ93098 351 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 ADGRE2Q9UHX3 823 aa8.91□□□□□ -0.98
CUL3-208ENST00000454323 BRD2P25440 801 aaKnown RBP8.9□□□□□ -0.98
CUL3-208ENST00000454323 CABP4P57796 275 aa8.9□□□□□ -0.98
CUL3-208ENST00000454323 CEP135Q66GS9 1140 aa8.9□□□□□ -0.98
CUL3-208ENST00000454323 PIK3R5Q8WYR1 880 aa8.9□□□□□ -0.98
CUL3-208ENST00000454323 ZNF777Q9ULD5 760 aaPredicted RBP8.9□□□□□ -0.98
CUL3-208ENST00000454323 FSCN2O14926 492 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms