RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.73■■■□□ 2.35
MCF2L-219ENST00000453297 MROH5Q6ZUA9 1318 aa29.73■■■□□ 2.35
MCF2L-219ENST00000453297 RAD50Q92878 1312 aa29.73■■■□□ 2.35
MCF2L-219ENST00000453297 PDE8BO95263 885 aa29.73■■■□□ 2.35
MCF2L-219ENST00000453297 IFIT1P09914 478 aaKnown RBP29.73■■■□□ 2.35
MCF2L-219ENST00000453297 CCDC158Q5M9N0 1113 aa29.73■■■□□ 2.35
MCF2L-219ENST00000453297 KIAA1211Q6ZU35 1233 aa29.73■■■□□ 2.35
MCF2L-219ENST00000453297 FAM227BQ96M60 508 aa29.73■■■□□ 2.35
MCF2L-219ENST00000453297 RFX7Q2KHR2 1363 aa29.72■■■□□ 2.35
MCF2L-219ENST00000453297 GTF2E1P29083 439 aaPredicted RBP29.72■■■□□ 2.35
MCF2L-219ENST00000453297 SF3B3Q15393 1217 aaKnown RBP29.72■■■□□ 2.35
MCF2L-219ENST00000453297 GORABQ5T7V8 394 aa29.72■■■□□ 2.35
MCF2L-219ENST00000453297 CD2BP2O95400 341 aaKnown RBP29.71■■■□□ 2.35
MCF2L-219ENST00000453297 MPHOSPH8Q99549 860 aa29.71■■■□□ 2.35
MCF2L-219ENST00000453297 ANAPC15P60006 121 aa29.71■■■□□ 2.35
MCF2L-219ENST00000453297 C3orf67Q6ZVT6 689 aa29.71■■■□□ 2.35
MCF2L-219ENST00000453297 NBPF5PQ86XG9 351 aaPredicted RBP29.71■■■□□ 2.35
MCF2L-219ENST00000453297 SNRKQ9NRH2 765 aa29.71■■■□□ 2.35
MCF2L-219ENST00000453297 PALD1Q9ULE6 856 aa29.71■■■□□ 2.35
MCF2L-219ENST00000453297 ABCC12Q96J65 1359 aa29.7■■■□□ 2.35
MCF2L-219ENST00000453297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.7■■■□□ 2.34
MCF2L-219ENST00000453297 TTC39AQ5SRH9 613 aa29.7■■■□□ 2.34
MCF2L-219ENST00000453297 DDX46Q7L014 1031 aaKnown RBP29.7■■■□□ 2.34
MCF2L-219ENST00000453297 PAG1Q9NWQ8 432 aa29.7■■■□□ 2.34
MCF2L-219ENST00000453297 HSPA4P34932 840 aa29.69■■■□□ 2.34
MCF2L-219ENST00000453297 IGHMBP2P38935 993 aaKnown RBP29.69■■■□□ 2.34
MCF2L-219ENST00000453297 TXNRD1Q16881 649 aa29.69■■■□□ 2.34
MCF2L-219ENST00000453297 PROM2Q8N271 834 aa29.69■■■□□ 2.34
MCF2L-219ENST00000453297 KBTBD3Q8NAB2 608 aa29.69■■■□□ 2.34
MCF2L-219ENST00000453297 IL17RAQ96F46 866 aa29.69■■■□□ 2.34
MCF2L-219ENST00000453297 A0A0D9SFI3 127 aa29.68■■■□□ 2.34
MCF2L-219ENST00000453297 GOLIM4O00461 696 aa29.68■■■□□ 2.34
MCF2L-219ENST00000453297 TPTE2Q6XPS3 522 aa29.68■■■□□ 2.34
MCF2L-219ENST00000453297 EP400Q96L91 3159 aa29.68■■■□□ 2.34
MCF2L-219ENST00000453297 ARAP2Q8WZ64 1704 aa29.67■■■□□ 2.34
MCF2L-219ENST00000453297 HELBQ8NG08 1087 aaPredicted RBP29.67■■■□□ 2.34
MCF2L-219ENST00000453297 COL4A1P02462 1669 aa29.67■■■□□ 2.34
MCF2L-219ENST00000453297 FGFR2P21802 821 aa29.66■■■□□ 2.34
MCF2L-219ENST00000453297 CDC5LQ99459 802 aaKnown RBP29.66■■■□□ 2.34
MCF2L-219ENST00000453297 SSFA2P28290 1259 aa29.66■■■□□ 2.34
MCF2L-219ENST00000453297 PTH1RQ03431 593 aa29.66■■■□□ 2.34
MCF2L-219ENST00000453297 PUM3Q15397 648 aaKnown RBP29.66■■■□□ 2.34
MCF2L-219ENST00000453297 TICAM2Q86XR7 235 aa29.66■■■□□ 2.34
MCF2L-219ENST00000453297 MED23Q9ULK4 1368 aa29.65■■■□□ 2.34
MCF2L-219ENST00000453297 HMGB2P26583 209 aaKnown RBP29.65■■■□□ 2.34
MCF2L-219ENST00000453297 ANP32EQ9BTT0 268 aa29.65■■■□□ 2.34
MCF2L-219ENST00000453297 TAF1P21675 1872 aa29.64■■■□□ 2.34
MCF2L-219ENST00000453297 K7ELQ4 463 aaPredicted RBP29.64■■■□□ 2.34
MCF2L-219ENST00000453297 PLSCR1O15162 318 aa29.64■■■□□ 2.34
MCF2L-219ENST00000453297 LPIN2Q92539 896 aa29.64■■■□□ 2.34
MCF2L-219ENST00000453297 RGS17Q9UGC6 210 aaPredicted RBP29.64■■■□□ 2.34
MCF2L-219ENST00000453297 CCDC171Q6TFL3 1326 aa29.64■■■□□ 2.34
MCF2L-219ENST00000453297 NFIXQ14938 502 aa29.64■■■□□ 2.33
MCF2L-219ENST00000453297 SPRYD3Q8NCJ5 442 aa29.64■■■□□ 2.33
MCF2L-219ENST00000453297 NLRP3Q96P20 1036 aa29.64■■■□□ 2.33
MCF2L-219ENST00000453297 SLKQ9H2G2 1235 aaPredicted RBP29.64■■■□□ 2.33
MCF2L-219ENST00000453297 CARMIL3Q8ND23 1372 aa29.63■■■□□ 2.33
MCF2L-219ENST00000453297 SCARF1Q14162 830 aa29.62■■■□□ 2.33
MCF2L-219ENST00000453297 ZNF512BQ96KM6 892 aaPredicted RBP29.62■■■□□ 2.33
MCF2L-219ENST00000453297 ANTXR1Q9H6X2 564 aa29.62■■■□□ 2.33
MCF2L-219ENST00000453297 AKAP11Q9UKA4 1901 aa29.62■■■□□ 2.33
MCF2L-219ENST00000453297 ST18O60284 1047 aa29.61■■■□□ 2.33
MCF2L-219ENST00000453297 APBA3O96018 575 aa29.61■■■□□ 2.33
MCF2L-219ENST00000453297 FKBP4Q02790 459 aaKnown RBP eCLIP29.61■■■□□ 2.332e-6■□□□□ 10.6
MCF2L-219ENST00000453297 ANKRD18AQ8IVF6 992 aa29.61■■■□□ 2.33
MCF2L-219ENST00000453297 TAF5LO75529 589 aa29.61■■■□□ 2.33
MCF2L-219ENST00000453297 CHGBP05060 677 aa29.6■■■□□ 2.33
MCF2L-219ENST00000453297 GYS1P13807 737 aa29.6■■■□□ 2.33
MCF2L-219ENST00000453297 SLC5A1P13866 664 aa29.6■■■□□ 2.33
MCF2L-219ENST00000453297 CCDC24Q8N4L8 307 aa29.6■■■□□ 2.33
MCF2L-219ENST00000453297 MAP4K1Q92918 833 aa29.6■■■□□ 2.33
MCF2L-219ENST00000453297 SNX14Q9Y5W7 946 aa29.6■■■□□ 2.33
MCF2L-219ENST00000453297 A0A1B0GUL6 1792 aa29.6■■■□□ 2.33
MCF2L-219ENST00000453297 CHRNDQ07001 517 aa29.59■■■□□ 2.33
MCF2L-219ENST00000453297 ZNF589Q86UQ0 364 aaPredicted RBP29.59■■■□□ 2.33
MCF2L-219ENST00000453297 NEK4P51957 841 aa29.59■■■□□ 2.33
MCF2L-219ENST00000453297 MCAMP43121 646 aa29.58■■■□□ 2.33
MCF2L-219ENST00000453297 ZAP70P43403 619 aa29.58■■■□□ 2.33
MCF2L-219ENST00000453297 MCMDC2Q4G0Z9 681 aa29.58■■■□□ 2.33
MCF2L-219ENST00000453297 CCDC102BQ68D86 513 aa29.58■■■□□ 2.33
MCF2L-219ENST00000453297 POTEAQ6S8J7 498 aa29.58■■■□□ 2.33
MCF2L-219ENST00000453297 BSDC1Q9NW68 430 aaPredicted RBP29.58■■■□□ 2.33
MCF2L-219ENST00000453297 RASEFQ8IZ41 740 aa29.57■■■□□ 2.32
MCF2L-219ENST00000453297 SEC62Q99442 399 aaKnown RBP29.57■■■□□ 2.32
MCF2L-219ENST00000453297 TNRC6CQ9HCJ0 1690 aaKnown RBP29.57■■■□□ 2.32
MCF2L-219ENST00000453297 SNAP23O00161 211 aa29.57■■■□□ 2.32
MCF2L-219ENST00000453297 ARID4AP29374 1257 aaPredicted RBP29.57■■■□□ 2.32
MCF2L-219ENST00000453297 PHKA1P46020 1223 aa29.57■■■□□ 2.32
MCF2L-219ENST00000453297 NECTIN1Q15223 517 aa29.57■■■□□ 2.32
MCF2L-219ENST00000453297 CELF1Q92879 486 aaKnown RBP29.57■■■□□ 2.32
MCF2L-219ENST00000453297 KCNB2Q92953 911 aa29.57■■■□□ 2.32
MCF2L-219ENST00000453297 RBM8AQ9Y5S9 174 aaKnown RBP29.57■■■□□ 2.32
MCF2L-219ENST00000453297 TNS1Q9HBL0 1735 aaKnown RBP29.56■■■□□ 2.32
MCF2L-219ENST00000453297 UQCRFS1P1P0C7P4 283 aa29.56■■■□□ 2.32
MCF2L-219ENST00000453297 HELLSQ9NRZ9 838 aa29.56■■■□□ 2.32
MCF2L-219ENST00000453297 NPHP1O15259 732 aa29.55■■■□□ 2.32
MCF2L-219ENST00000453297 RNF113AO15541 343 aaKnown RBP29.55■■■□□ 2.32
MCF2L-219ENST00000453297 ZMYM1Q5SVZ6 1142 aa29.55■■■□□ 2.32
MCF2L-219ENST00000453297 PI16Q6UXB8 463 aa29.55■■■□□ 2.32
MCF2L-219ENST00000453297 FBXO41Q8TF61 875 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms