RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 PTPRKQ15262 1439 aa10.86□□□□□ -0.67
COPS7B-216ENST00000452375 ABCC1P33527 1531 aa10.86□□□□□ -0.67
COPS7B-216ENST00000452375 PPP1R12BO60237 982 aaPredicted RBP10.86□□□□□ -0.67
COPS7B-216ENST00000452375 TRIM28Q13263 835 aaKnown RBP10.86□□□□□ -0.67
COPS7B-216ENST00000452375 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
COPS7B-216ENST00000452375 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
COPS7B-216ENST00000452375 KCNH4Q9UQ05 1017 aa10.86□□□□□ -0.67
COPS7B-216ENST00000452375 CLTCQ00610 1675 aaKnown RBP10.85□□□□□ -0.67
COPS7B-216ENST00000452375 ITSN2Q9NZM3 1697 aa10.85□□□□□ -0.67
COPS7B-216ENST00000452375 TROQ12816 1431 aaPredicted RBP10.85□□□□□ -0.67
COPS7B-216ENST00000452375 CPS1P31327 1500 aa10.85□□□□□ -0.67
COPS7B-216ENST00000452375 RSPO4Q2I0M5 234 aaPredicted RBP10.85□□□□□ -0.67
COPS7B-216ENST00000452375 PLEKHM2Q8IWE5 1019 aa10.85□□□□□ -0.67
COPS7B-216ENST00000452375 NGLY1Q96IV0 654 aa10.85□□□□□ -0.67
COPS7B-216ENST00000452375 SUSD3Q96L08 255 aa10.85□□□□□ -0.67
COPS7B-216ENST00000452375 ANKIB1Q9P2G1 1089 aa10.85□□□□□ -0.67
COPS7B-216ENST00000452375 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
COPS7B-216ENST00000452375 TYRO3Q06418 890 aa10.84□□□□□ -0.67
COPS7B-216ENST00000452375 C1orf53Q5VUE5 145 aa10.84□□□□□ -0.67
COPS7B-216ENST00000452375 RBM19Q9Y4C8 960 aaKnown RBP10.84□□□□□ -0.67
COPS7B-216ENST00000452375 NEURL4Q96JN8 1562 aa10.84□□□□□ -0.67
COPS7B-216ENST00000452375 ATP9BO43861 1147 aa10.83□□□□□ -0.68
COPS7B-216ENST00000452375 TRAPPC3LQ5T215 181 aa10.83□□□□□ -0.68
COPS7B-216ENST00000452375 UBE2OQ9C0C9 1292 aaKnown RBP10.83□□□□□ -0.68
COPS7B-216ENST00000452375 DNMT1P26358 1616 aaKnown RBP10.83□□□□□ -0.68
COPS7B-216ENST00000452375 SCO2A0A1W2PP80 73 aa10.82□□□□□ -0.68
COPS7B-216ENST00000452375 NID1P14543 1247 aa10.82□□□□□ -0.68
COPS7B-216ENST00000452375 CDK11AQ9UQ88 783 aaPredicted RBP10.82□□□□□ -0.68
COPS7B-216ENST00000452375 PREX2Q70Z35 1606 aa10.82□□□□□ -0.68
COPS7B-216ENST00000452375 VWDEQ8N2E2 1590 aa10.82□□□□□ -0.68
COPS7B-216ENST00000452375 LRRIQ1Q96JM4 1722 aa10.81□□□□□ -0.68
COPS7B-216ENST00000452375 PALM3A6NDB9 673 aaPredicted RBP10.81□□□□□ -0.68
COPS7B-216ENST00000452375 LGR5O75473 907 aa10.81□□□□□ -0.68
COPS7B-216ENST00000452375 ALDH16A1Q8IZ83 802 aa10.81□□□□□ -0.68
COPS7B-216ENST00000452375 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
COPS7B-216ENST00000452375 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
COPS7B-216ENST00000452375 POLR1AO95602 1720 aaPredicted RBP10.81□□□□□ -0.68
COPS7B-216ENST00000452375 A2ML1A8K2U0 1454 aa10.81□□□□□ -0.68
COPS7B-216ENST00000452375 C21orf2O43822 256 aa10.8□□□□□ -0.68
COPS7B-216ENST00000452375 HIRAP54198 1017 aaPredicted RBP10.8□□□□□ -0.68
COPS7B-216ENST00000452375 NKAPLQ5M9Q1 402 aa10.8□□□□□ -0.68
COPS7B-216ENST00000452375 NUDT8Q8WV74 236 aa10.8□□□□□ -0.68
COPS7B-216ENST00000452375 SCG3Q8WXD2 468 aaKnown RBP10.8□□□□□ -0.68
COPS7B-216ENST00000452375 PRDM6Q9NQX0 595 aa10.8□□□□□ -0.68
COPS7B-216ENST00000452375 CLIP1P30622 1438 aa10.79□□□□□ -0.68
COPS7B-216ENST00000452375 LILRB5O75023 590 aa10.79□□□□□ -0.68
COPS7B-216ENST00000452375 POTEAQ6S8J7 498 aa10.79□□□□□ -0.68
COPS7B-216ENST00000452375 C20orf204Q6ZNR8 217 aa10.79□□□□□ -0.68
COPS7B-216ENST00000452375 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
COPS7B-216ENST00000452375 NACC1Q96RE7 527 aa10.79□□□□□ -0.68
COPS7B-216ENST00000452375 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
COPS7B-216ENST00000452375 PLXNC1O60486 1568 aa10.78□□□□□ -0.68
COPS7B-216ENST00000452375 DYRK3O43781 588 aa10.78□□□□□ -0.68
COPS7B-216ENST00000452375 KCNQ4P56696 695 aa10.78□□□□□ -0.68
COPS7B-216ENST00000452375 BTLAQ7Z6A9 289 aa10.78□□□□□ -0.68
COPS7B-216ENST00000452375 JPH1Q9HDC5 661 aaPredicted RBP10.78□□□□□ -0.68
COPS7B-216ENST00000452375 FMN1Q68DA7 1419 aa10.77□□□□□ -0.68
COPS7B-216ENST00000452375 M0R2N6 131 aa10.77□□□□□ -0.69
COPS7B-216ENST00000452375 RASA1P20936 1047 aa10.77□□□□□ -0.69
COPS7B-216ENST00000452375 FOXD4L6Q3SYB3 417 aaPredicted RBP10.77□□□□□ -0.69
COPS7B-216ENST00000452375 GGT6Q6P531 493 aa10.77□□□□□ -0.69
COPS7B-216ENST00000452375 FOXD4L3Q6VB84 417 aaPredicted RBP10.77□□□□□ -0.69
COPS7B-216ENST00000452375 SIX5Q8N196 739 aa10.77□□□□□ -0.69
COPS7B-216ENST00000452375 SLC6A14Q9UN76 642 aa10.77□□□□□ -0.69
COPS7B-216ENST00000452375 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.69
COPS7B-216ENST00000452375 CDC42BPAQ5VT25 1732 aa10.76□□□□□ -0.69
COPS7B-216ENST00000452375 SPAG9O60271 1321 aaKnown RBP10.76□□□□□ -0.69
COPS7B-216ENST00000452375 A2MP01023 1474 aa10.75□□□□□ -0.69
COPS7B-216ENST00000452375 ARHGAP35Q9NRY4 1499 aa10.75□□□□□ -0.69
COPS7B-216ENST00000452375 SYCP2Q9BX26 1530 aa10.75□□□□□ -0.69
COPS7B-216ENST00000452375 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.694e-7■■■■□ 20.7
COPS7B-216ENST00000452375 FLIIQ13045 1269 aa10.75□□□□□ -0.69
COPS7B-216ENST00000452375 PNMA5Q96PV4 448 aa10.75□□□□□ -0.69
COPS7B-216ENST00000452375 HINFPQ9BQA5 517 aa10.75□□□□□ -0.69
COPS7B-216ENST00000452375 ATP7AQ04656 1500 aa10.74□□□□□ -0.69
COPS7B-216ENST00000452375 LRRC7Q96NW7 1537 aa10.74□□□□□ -0.69
COPS7B-216ENST00000452375 A0A0A0MRY4 1105 aa10.74□□□□□ -0.69
COPS7B-216ENST00000452375 DKK1O94907 266 aa10.74□□□□□ -0.69
COPS7B-216ENST00000452375 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
COPS7B-216ENST00000452375 C2orf49Q9BVC5 232 aaPredicted RBP10.74□□□□□ -0.69
COPS7B-216ENST00000452375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.74□□□□□ -0.69
COPS7B-216ENST00000452375 INO80Q9ULG1 1556 aaPredicted RBP10.73□□□□□ -0.69
COPS7B-216ENST00000452375 PRSS36Q5K4E3 855 aa10.73□□□□□ -0.69
COPS7B-216ENST00000452375 PSAPL1Q6NUJ1 521 aa10.73□□□□□ -0.69
COPS7B-216ENST00000452375 ANKLE2Q86XL3 938 aa10.73□□□□□ -0.69
COPS7B-216ENST00000452375 KRTAP4-8Q9BYQ9 185 aa10.73□□□□□ -0.69
COPS7B-216ENST00000452375 DNAJB12Q9NXW2 375 aaKnown RBP10.73□□□□□ -0.69
COPS7B-216ENST00000452375 TFIP11Q9UBB9 837 aaKnown RBP10.73□□□□□ -0.69
COPS7B-216ENST00000452375 ZNF777Q9ULD5 760 aaPredicted RBP10.73□□□□□ -0.69
COPS7B-216ENST00000452375 TNRQ92752 1358 aa10.73□□□□□ -0.69
COPS7B-216ENST00000452375 NPHP4O75161 1426 aaPredicted RBP10.73□□□□□ -0.69
COPS7B-216ENST00000452375 MED14O60244 1454 aa10.73□□□□□ -0.69
COPS7B-216ENST00000452375 RNF17Q9BXT8 1623 aaKnown RBP10.73□□□□□ -0.69
COPS7B-216ENST00000452375 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
COPS7B-216ENST00000452375 SELPP16109 830 aa10.72□□□□□ -0.69
COPS7B-216ENST00000452375 NFKB1P19838 968 aa10.72□□□□□ -0.69
COPS7B-216ENST00000452375 SEC13P55735 322 aa10.72□□□□□ -0.69
COPS7B-216ENST00000452375 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
COPS7B-216ENST00000452375 PSMG3-AS1Q96PY0 264 aa10.72□□□□□ -0.69
COPS7B-216ENST00000452375 EEA1Q15075 1411 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms