RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 UFL1O94874 794 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 GNAI2P04899 355 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 ANKRD44Q8N8A2 993 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 MEIS3Q99687 375 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 CHMP4BQ9H444 224 aaKnown RBP11.1□□□□□ -0.63
COL8A1-203ENST00000452013 ZNRF3Q9ULT6 936 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 TNNQ9UQP3 1299 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 ANKRD36CQ5JPF3 1778 aa11.1□□□□□ -0.63
COL8A1-203ENST00000452013 VEGFAP15692 232 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-203ENST00000452013 KCNJ4P48050 445 aa11.09□□□□□ -0.63
COL8A1-203ENST00000452013 CHRNDQ07001 517 aa11.09□□□□□ -0.63
COL8A1-203ENST00000452013 SLC51AQ86UW1 340 aa11.09□□□□□ -0.63
COL8A1-203ENST00000452013 ITPRIPQ8IWB1 547 aa11.09□□□□□ -0.63
COL8A1-203ENST00000452013 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-203ENST00000452013 RRAGCQ9HB90 399 aa11.09□□□□□ -0.63
COL8A1-203ENST00000452013 LRRFIP2Q9Y608 721 aaKnown RBP11.09□□□□□ -0.63
COL8A1-203ENST00000452013 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-203ENST00000452013 SNED1Q8TER0 1413 aa11.09□□□□□ -0.63
COL8A1-203ENST00000452013 SLX4Q8IY92 1834 aa11.08□□□□□ -0.64
COL8A1-203ENST00000452013 ZBTB7BO15156 539 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-203ENST00000452013 DDNO94850 711 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-203ENST00000452013 TNIP1Q15025 636 aa11.08□□□□□ -0.64
COL8A1-203ENST00000452013 C16orf71Q8IYS4 520 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-203ENST00000452013 GPC2Q8N158 579 aa11.08□□□□□ -0.64
COL8A1-203ENST00000452013 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
COL8A1-203ENST00000452013 ZNF804BA4D1E1 1349 aa11.08□□□□□ -0.64
COL8A1-203ENST00000452013 MROH5Q6ZUA9 1318 aa11.08□□□□□ -0.64
COL8A1-203ENST00000452013 PLIN1O60240 522 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 CXCL9Q07325 125 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 CIAPIN1Q6FI81 312 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 PANK1Q8TE04 598 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 RIPOR2Q9Y4F9 1068 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
COL8A1-203ENST00000452013 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 EYA2O00167 538 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 TAF5LO75529 589 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 RLBP1P12271 317 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 RFX5P48382 616 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-203ENST00000452013 PTPN12Q05209 780 aaKnown RBP11.06□□□□□ -0.64
COL8A1-203ENST00000452013 UBE4AQ14139 1066 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 METTL24Q5JXM2 366 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 HELBQ8NG08 1087 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-203ENST00000452013 PUS3Q9BZE2 481 aaKnown RBP11.06□□□□□ -0.64
COL8A1-203ENST00000452013 COA1Q9GZY4 146 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 DBNDD1Q9H9R9 158 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 DDX19BQ9UMR2 479 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 ARFGEF1Q9Y6D6 1849 aa11.06□□□□□ -0.64
COL8A1-203ENST00000452013 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
COL8A1-203ENST00000452013 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
COL8A1-203ENST00000452013 ECE2O60344 883 aa11.05□□□□□ -0.64
COL8A1-203ENST00000452013 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-203ENST00000452013 MTX1Q13505 466 aa11.05□□□□□ -0.64
COL8A1-203ENST00000452013 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
COL8A1-203ENST00000452013 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
COL8A1-203ENST00000452013 C15orf52Q6ZUT6 534 aaKnown RBP11.05□□□□□ -0.64
COL8A1-203ENST00000452013 L3MBTL3Q96JM7 780 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-203ENST00000452013 GPR101Q96P66 508 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-203ENST00000452013 COPRSQ9NQ92 184 aa11.05□□□□□ -0.64
COL8A1-203ENST00000452013 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
COL8A1-203ENST00000452013 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
COL8A1-203ENST00000452013 MED23Q9ULK4 1368 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 DDX60Q8IY21 1712 aaKnown RBP11.04□□□□□ -0.64
COL8A1-203ENST00000452013 KIF3CO14782 793 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 RAD17O75943 681 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 CIAO1O76071 339 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 TOMM70O94826 608 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 PDE8BO95263 885 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-203ENST00000452013 ATP8B2P98198 1209 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 HACL1Q9UJ83 578 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 COG6Q9Y2V7 657 aa11.04□□□□□ -0.64
COL8A1-203ENST00000452013 WTIPA6NIX2 430 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-203ENST00000452013 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
COL8A1-203ENST00000452013 POTECB2RU33 542 aa11.03□□□□□ -0.64
COL8A1-203ENST00000452013 G3BP1Q13283 466 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL8A1-203ENST00000452013 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
COL8A1-203ENST00000452013 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-203ENST00000452013 USP17L3A6NCW0 530 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 USP17L4A6NCW7 530 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 H7C1D1 291 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 VIL1P09327 827 aaKnown RBP11.02□□□□□ -0.65
COL8A1-203ENST00000452013 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.65
COL8A1-203ENST00000452013 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.65
COL8A1-203ENST00000452013 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
COL8A1-203ENST00000452013 CAVIN4Q5BKX8 364 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 USP17L1Q7RTZ2 530 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 ATG9AQ7Z3C6 839 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-203ENST00000452013 DPF2Q92785 391 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 SIL1Q9H173 461 aa11.02□□□□□ -0.65
COL8A1-203ENST00000452013 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-203ENST00000452013 CD209Q9NNX6 404 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms