RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 DTWD1Q8N5C7 304 aa8.22□□□□□ -1.09
GTF3C3-207ENST00000451088 NUDT16Q96DE0 195 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-207ENST00000451088 NSUN5Q96P11 429 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-207ENST00000451088 NACC1Q96RE7 527 aa8.22□□□□□ -1.09
GTF3C3-207ENST00000451088 MYO15BQ96JP2 1530 aa8.22□□□□□ -1.09
GTF3C3-207ENST00000451088 RAC1P63000 192 aa8.21□□□□□ -1.1
GTF3C3-207ENST00000451088 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.1
GTF3C3-207ENST00000451088 PLD4Q96BZ4 506 aa8.21□□□□□ -1.1
GTF3C3-207ENST00000451088 SUPT5HO00267 1087 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 ADAM23O75077 832 aa8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 SELPP16109 830 aa8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 MPSTP25325 297 aa8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 GATA4P43694 442 aa8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 EIF1AXP47813 144 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 XKR5Q6UX68 686 aa8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 ABI2Q9NYB9 513 aaPredicted RBP8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
GTF3C3-207ENST00000451088 C9orf172C9J069 976 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 KIF4AO95239 1232 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 GHRHP01286 108 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 PDGFAP04085 211 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 MZF1P28698 734 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 COL13A1Q5TAT6 717 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 TTC39BQ5VTQ0 682 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 FBXO11Q86XK2 927 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 WFDC8Q8IUA0 241 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 EDEM1Q92611 657 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 LENG1Q96BZ8 264 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 ELP3Q9H9T3 547 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
GTF3C3-207ENST00000451088 HYAL2Q12891 473 aa8.18□□□□□ -1.1
GTF3C3-207ENST00000451088 SF3B2Q13435 895 aaKnown RBP8.18□□□□□ -1.1
GTF3C3-207ENST00000451088 MTMR3Q13615 1198 aa8.18□□□□□ -1.1
GTF3C3-207ENST00000451088 ALKBH2Q6NS38 261 aa8.18□□□□□ -1.1
GTF3C3-207ENST00000451088 RBSNQ9H1K0 784 aa8.18□□□□□ -1.1
GTF3C3-207ENST00000451088 TMEM63CQ9P1W3 806 aa8.18□□□□□ -1.1
GTF3C3-207ENST00000451088 FURINP09958 794 aa8.17□□□□□ -1.1
GTF3C3-207ENST00000451088 DNM1Q05193 864 aaKnown RBP8.17□□□□□ -1.1
GTF3C3-207ENST00000451088 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
GTF3C3-207ENST00000451088 ZNF438Q7Z4V0 828 aa8.17□□□□□ -1.1
GTF3C3-207ENST00000451088 GGNBP2Q9H3C7 697 aa8.17□□□□□ -1.1
GTF3C3-207ENST00000451088 FAM13AO94988 1023 aa8.16□□□□□ -1.1
GTF3C3-207ENST00000451088 PCSK2P16519 638 aa8.16□□□□□ -1.1
GTF3C3-207ENST00000451088 FKBP4Q02790 459 aaKnown RBP eCLIP8.16□□□□□ -1.1
GTF3C3-207ENST00000451088 B4GALNT3Q6L9W6 998 aa8.16□□□□□ -1.1
GTF3C3-207ENST00000451088 SHISA2Q6UWI4 295 aa8.16□□□□□ -1.1
GTF3C3-207ENST00000451088 CACTIN-AS1Q8N1I8 211 aa8.16□□□□□ -1.1
GTF3C3-207ENST00000451088 ARID3AQ99856 593 aa8.16□□□□□ -1.1
GTF3C3-207ENST00000451088 ERCC6Q03468 1493 aa8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 K7ELQ4 463 aaPredicted RBP8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 DEAF1O75398 565 aaPredicted RBP8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 CYP2E1P05181 493 aaPredicted RBP8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 DOC2BQ14184 412 aa8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 MBTPS1Q14703 1052 aa8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 IL22RA1Q8N6P7 574 aa8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 CNTN3Q9P232 1028 aa8.15□□□□□ -1.1
GTF3C3-207ENST00000451088 ATP11AP98196 1134 aa8.14□□□□□ -1.11
GTF3C3-207ENST00000451088 CEP120Q8N960 986 aa8.14□□□□□ -1.11
GTF3C3-207ENST00000451088 SPACA7Q96KW9 195 aa8.14□□□□□ -1.11
GTF3C3-207ENST00000451088 SRA1Q9HD15 236 aaKnown RBP8.14□□□□□ -1.11
GTF3C3-207ENST00000451088 EGFL7Q9UHF1 273 aa8.14□□□□□ -1.11
GTF3C3-207ENST00000451088 POLIQ9UNA4 740 aa8.14□□□□□ -1.11
GTF3C3-207ENST00000451088 TRIM33Q9UPN9 1127 aa8.14□□□□□ -1.11
GTF3C3-207ENST00000451088 LOC100996750A0A140TA64 210 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 A6NHS1 94 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 FZD6O60353 706 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 GDF6Q6KF10 455 aaPredicted RBP8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 C1orf127Q8N9H9 656 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 KRTAP4-6Q9BYQ5 205 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 SALL4Q9UJQ4 1053 aa8.13□□□□□ -1.11
GTF3C3-207ENST00000451088 DLL1O00548 723 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 ABL1P00519 1130 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 USP5P45974 858 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 RSPO4Q2I0M5 234 aaPredicted RBP8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 C8orf34Q49A92 452 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 NKAPLQ5M9Q1 402 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 CHRDQ9H2X0 955 aa8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.12□□□□□ -1.11
GTF3C3-207ENST00000451088 ICMTO60725 284 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 SMNDC1O75940 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 ZNF211Q13398 564 aaPredicted RBP8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 ECM1Q16610 540 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 CEP135Q66GS9 1140 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 ADAMTSL4Q6UY14 1074 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 NCAPG2Q86XI2 1143 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 MAP4K3Q8IVH8 894 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 TTC16Q8NEE8 873 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 PMEPA1Q969W9 287 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 MUC3BQ9H195 1237 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 KANSL3Q9P2N6 904 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 PPME1Q9Y570 386 aa8.11□□□□□ -1.11
GTF3C3-207ENST00000451088 CES1P23141 567 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms