RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TTLL11Q8NHH1 800 aa19.46■□□□□ 0.71
CHD3-205ENST00000449744 GGA1Q9UJY5 639 aa19.46■□□□□ 0.71
CHD3-205ENST00000449744 YDJCA8MPS7 323 aa19.45■□□□□ 0.7
CHD3-205ENST00000449744 COL13A1Q5TAT6 717 aaPredicted RBP19.45■□□□□ 0.7
CHD3-205ENST00000449744 GREM2Q9H772 168 aa19.45■□□□□ 0.7
CHD3-205ENST00000449744 ZNF521Q96K83 1311 aa19.45■□□□□ 0.7
CHD3-205ENST00000449744 TMEM88BA6NKF7 163 aa19.44■□□□□ 0.7
CHD3-205ENST00000449744 ECE2O60344 883 aa19.44■□□□□ 0.7
CHD3-205ENST00000449744 DOK7Q18PE1 504 aa19.44■□□□□ 0.7
CHD3-205ENST00000449744 GPR101Q96P66 508 aaPredicted RBP19.44■□□□□ 0.7
CHD3-205ENST00000449744 XDHP47989 1333 aa19.44■□□□□ 0.7
CHD3-205ENST00000449744 F6X3S4 739 aa19.43■□□□□ 0.7
CHD3-205ENST00000449744 PLA2G12BQ9BX93 195 aa19.43■□□□□ 0.7
CHD3-205ENST00000449744 MKRN1Q9UHC7 482 aaKnown RBP19.43■□□□□ 0.7
CHD3-205ENST00000449744 MYH3P11055 1940 aa19.43■□□□□ 0.7
CHD3-205ENST00000449744 RTL9Q8NET4 1388 aa19.43■□□□□ 0.7
CHD3-205ENST00000449744 H7C1D1 291 aa19.42■□□□□ 0.7
CHD3-205ENST00000449744 PSMD14O00487 310 aa19.42■□□□□ 0.7
CHD3-205ENST00000449744 ATP2B4P23634 1241 aa19.42■□□□□ 0.7
CHD3-205ENST00000449744 IGHMBP2P38935 993 aaKnown RBP19.42■□□□□ 0.7
CHD3-205ENST00000449744 BSDC1Q9NW68 430 aaPredicted RBP19.42■□□□□ 0.7
CHD3-205ENST00000449744 CNOT7Q9UIV1 285 aaKnown RBP19.42■□□□□ 0.7
CHD3-205ENST00000449744 E9PSI1 815 aa19.41■□□□□ 0.7
CHD3-205ENST00000449744 TNS4Q8IZW8 715 aa19.41■□□□□ 0.7
CHD3-205ENST00000449744 ZBTB12Q9Y330 459 aaPredicted RBP19.41■□□□□ 0.7
CHD3-205ENST00000449744 CAPN15O75808 1086 aa19.4■□□□□ 0.7
CHD3-205ENST00000449744 HSPA1AP0DMV8 641 aaKnown RBP19.4■□□□□ 0.7
CHD3-205ENST00000449744 HSPA1BP0DMV9 641 aaKnown RBP19.4■□□□□ 0.7
CHD3-205ENST00000449744 ITGA6P23229 1130 aa19.4■□□□□ 0.7
CHD3-205ENST00000449744 CASP7P55210 303 aa19.4■□□□□ 0.7
CHD3-205ENST00000449744 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
CHD3-205ENST00000449744 MICALL2Q8IY33 904 aa19.4■□□□□ 0.7
CHD3-205ENST00000449744 DPF2Q92785 391 aa19.4■□□□□ 0.7
CHD3-205ENST00000449744 RPS12P25398 132 aaKnown RBP19.39■□□□□ 0.69
CHD3-205ENST00000449744 SLC4A10Q6U841 1118 aa19.39■□□□□ 0.69
CHD3-205ENST00000449744 MPHOSPH8Q99549 860 aa19.39■□□□□ 0.69
CHD3-205ENST00000449744 MINPP1Q9UNW1 487 aa19.39■□□□□ 0.69
CHD3-205ENST00000449744 CCER2I3L3R5 266 aa19.38■□□□□ 0.69
CHD3-205ENST00000449744 CSF1RP07333 972 aa19.38■□□□□ 0.69
CHD3-205ENST00000449744 FAM161AQ3B820 660 aa19.38■□□□□ 0.69
CHD3-205ENST00000449744 KCNQ5Q9NR82 932 aa19.38■□□□□ 0.69
CHD3-205ENST00000449744 CNTNAP1P78357 1384 aa19.37■□□□□ 0.69
CHD3-205ENST00000449744 ANKRD18BA2A2Z9 1011 aa19.37■□□□□ 0.69
CHD3-205ENST00000449744 ZC3H15Q8WU90 426 aaKnown RBP19.37■□□□□ 0.69
CHD3-205ENST00000449744 C9orf78Q9NZ63 289 aaPredicted RBP19.37■□□□□ 0.69
CHD3-205ENST00000449744 ABT1Q9ULW3 272 aaKnown RBP19.37■□□□□ 0.69
CHD3-205ENST00000449744 CHMP3Q9Y3E7 222 aa19.37■□□□□ 0.69
CHD3-205ENST00000449744 SPEF2Q9C093 1822 aa19.37■□□□□ 0.69
CHD3-205ENST00000449744 SHTN1A0MZ66 631 aa19.36■□□□□ 0.69
CHD3-205ENST00000449744 ALDH1L1O75891 902 aa19.36■□□□□ 0.69
CHD3-205ENST00000449744 CCT4P50991 539 aaKnown RBP19.36■□□□□ 0.69
CHD3-205ENST00000449744 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
CHD3-205ENST00000449744 TRPM4Q8TD43 1214 aa19.36■□□□□ 0.69
CHD3-205ENST00000449744 SRCIN1Q9C0H9 1055 aa19.36■□□□□ 0.69
CHD3-205ENST00000449744 ANKRD2Q9GZV1 360 aa19.36■□□□□ 0.69
CHD3-205ENST00000449744 GRM8O00222 908 aa19.35■□□□□ 0.69
CHD3-205ENST00000449744 TRAF5O00463 557 aa19.35■□□□□ 0.69
CHD3-205ENST00000449744 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
CHD3-205ENST00000449744 HIRAP54198 1017 aaPredicted RBP19.35■□□□□ 0.69
CHD3-205ENST00000449744 DEFB115Q30KQ5 88 aa19.35■□□□□ 0.69
CHD3-205ENST00000449744 PGAP2Q9UHJ9 254 aa19.35■□□□□ 0.69
CHD3-205ENST00000449744 LEMD3Q9Y2U8 911 aa19.35■□□□□ 0.69
CHD3-205ENST00000449744 MED23Q9ULK4 1368 aa19.34■□□□□ 0.69
CHD3-205ENST00000449744 FMR1Q06787 632 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHD3-205ENST00000449744 IFIT5Q13325 482 aaKnown RBP19.34■□□□□ 0.69
CHD3-205ENST00000449744 TBC1D10BQ4KMP7 808 aaPredicted RBP19.34■□□□□ 0.69
CHD3-205ENST00000449744 RBM26Q5T8P6 1007 aaKnown RBP19.34■□□□□ 0.69
CHD3-205ENST00000449744 SAMD7Q7Z3H4 446 aa19.34■□□□□ 0.69
CHD3-205ENST00000449744 PODNQ7Z5L7 613 aa19.34■□□□□ 0.69
CHD3-205ENST00000449744 MRPL50Q8N5N7 158 aaKnown RBP19.34■□□□□ 0.69
CHD3-205ENST00000449744 KCNJ4P48050 445 aa19.33■□□□□ 0.68
CHD3-205ENST00000449744 FOXO4P98177 505 aa19.33■□□□□ 0.68
CHD3-205ENST00000449744 CDC37L1Q7L3B6 337 aa19.33■□□□□ 0.68
CHD3-205ENST00000449744 GLIS2Q9BZE0 524 aaPredicted RBP19.33■□□□□ 0.68
CHD3-205ENST00000449744 RASSF10A6NK89 507 aa19.32■□□□□ 0.68
CHD3-205ENST00000449744 VEGFBP49765 207 aa19.32■□□□□ 0.68
CHD3-205ENST00000449744 TAF7LQ5H9L4 462 aa19.32■□□□□ 0.68
CHD3-205ENST00000449744 RSBN1LQ6PCB5 846 aaPredicted RBP19.32■□□□□ 0.68
CHD3-205ENST00000449744 LMBR1LQ6UX01 489 aa19.32■□□□□ 0.68
CHD3-205ENST00000449744 AGBL3Q8NEM8 1001 aa19.32■□□□□ 0.68
CHD3-205ENST00000449744 SCN9AQ15858 1988 aa19.32■□□□□ 0.68
CHD3-205ENST00000449744 ZNF804BA4D1E1 1349 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 PTPRCP08575 1304 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 USP17L3A6NCW0 530 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 USP17L4A6NCW7 530 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 WTIPA6NIX2 430 aaPredicted RBP19.31■□□□□ 0.68
CHD3-205ENST00000449744 CHRNDQ07001 517 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 CCDC57Q2TAC2 916 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 PAXIP1Q6ZW49 1069 aaPredicted RBP19.31■□□□□ 0.68
CHD3-205ENST00000449744 USP17L1Q7RTZ2 530 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 SSH1Q8WYL5 1049 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 COA1Q9GZY4 146 aa19.31■□□□□ 0.68
CHD3-205ENST00000449744 CELF2O95319 508 aaKnown RBP19.3■□□□□ 0.68
CHD3-205ENST00000449744 KIF4BQ2VIQ3 1234 aa19.3■□□□□ 0.68
CHD3-205ENST00000449744 EPHA10Q5JZY3 1008 aa19.3■□□□□ 0.68
CHD3-205ENST00000449744 CST9Q5W186 159 aa19.3■□□□□ 0.68
CHD3-205ENST00000449744 FBXW7Q969H0 707 aa19.3■□□□□ 0.68
CHD3-205ENST00000449744 DCPSQ96C86 337 aaKnown RBP19.3■□□□□ 0.68
CHD3-205ENST00000449744 ZNF408Q9H9D4 720 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms