RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	CELF2	O95319	508 aa	Known RBP	10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	PCCA	P05165	728 aa	Predicted RBP	10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	LEMD3	Q9Y2U8	911 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	PER1	O15534	1290 aa	Predicted RBP	10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.13	□□□□□ -0.79	1e-8	■■■■□ 22.8
HCG18-238	ENST00000449544	UBAC1	Q9BSL1	405 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	NLRP10	Q86W26	655 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	CRBN	Q96SW2	442 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	ZNF804B	A4D1E1	1349 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	ROBO1	Q9Y6N7	1651 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	HLF	Q16534	295 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	ANO2	Q9NQ90	1003 aa		10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	CNOT7	Q9UIV1	285 aa	Known RBP	10.13	□□□□□ -0.79
HCG18-238	ENST00000449544	COL5A2	P05997	1499 aa	Predicted RBP	10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	GLRX3	O76003	335 aa	Known RBP	10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	PUM3	Q15397	648 aa	Known RBP	10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	TTC6	Q86TZ1	520 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	TSPYL6	Q8N831	410 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	ZNF594	Q96JF6	807 aa	Predicted RBP	10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	RANBP6	O60518	1105 aa	Known RBP	10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	RASSF7	Q02833	373 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	UBR1	Q8IWV7	1749 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	GCKR	Q14397	625 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	PDE3A	Q14432	1141 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	NBR1	Q14596	966 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	GADL1	Q6ZQY3	521 aa		10.12	□□□□□ -0.79
HCG18-238	ENST00000449544	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	FMNL1	O95466	1100 aa	Predicted RBP	10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	EPHX2	P34913	555 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	EIF5	P55010	431 aa	Known RBP	10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	STYK1	Q6J9G0	422 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	CDC37L1	Q7L3B6	337 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	HIP1	O00291	1037 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	DDN	O94850	711 aa	Predicted RBP	10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	RAB3GAP1	Q15042	981 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	TMEM132A	Q24JP5	1023 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	PRKAG2	Q9UGJ0	569 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	GOLIM4	O00461	696 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	LRRC4B	Q9NT99	713 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	KIF3A	Q9Y496	699 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	RGS12	O14924	1447 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	RNF123	Q5XPI4	1314 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	ZBED9	Q6R2W3	1325 aa		10.11	□□□□□ -0.79
HCG18-238	ENST00000449544	ANP32A	P39687	249 aa	Known RBP	10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	MAP1S	Q66K74	1059 aa	Predicted RBP	10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	MICALL2	Q8IY33	904 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	TMEM57	Q8N5G2	664 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	SEC31B	Q9NQW1	1179 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	USP40	Q9NVE5	1235 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	DEPDC5	O75140	1603 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	CNGA1	P29973	690 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	SH2D4A	Q9H788	454 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	TNS2	Q63HR2	1409 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	EYA2	O00167	538 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	NCL	P19338	710 aa	Known RBP	10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	TRIM29	Q14134	588 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	ZYX	Q15942	572 aa	Known RBP	10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	STX8	Q9UNK0	236 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	MAP4K4	O95819	1239 aa	Predicted RBP	10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	PDE4B	Q07343	736 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	SLFN5	Q08AF3	891 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	PODN	Q7Z5L7	613 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	NLGN2	Q8NFZ4	835 aa		10.1	□□□□□ -0.79
HCG18-238	ENST00000449544	NPC1L1	Q9UHC9	1359 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	LAMC1	P11047	1609 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	ECE2	O60344	883 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	KIF4B	Q2VIQ3	1234 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	PAGR1	Q9BTK6	254 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	BCAM	P50895	628 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	CHRND	Q07001	517 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	NKX1-1	Q15270	411 aa	Predicted RBP	10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	G2E3	Q7L622	706 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	NUP133	Q8WUM0	1156 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	MCM9	Q9NXL9	1143 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	ATRN	O75882	1429 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	GOLGA6L4	A6NEF3	574 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544		B4DLN1	442 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	GYG1	P46976	350 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	MRPL12	P52815	198 aa	Known RBP	10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	PROSER3	Q2NL68	480 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	CCDC184	Q52MB2	194 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	BICC1	Q9H694	974 aa	Known RBP	10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	CTNNA3	Q9UI47	895 aa		10.09	□□□□□ -0.79
HCG18-238	ENST00000449544	MROH5	Q6ZUA9	1318 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	PNPLA7	Q6ZV29	1317 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	TSPY2	A6NKD2	308 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	SPDYE4	A6NLX3	237 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	SP8	Q8IXZ3	490 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	LPIN2	Q92539	896 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	GPR101	Q96P66	508 aa	Predicted RBP	10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	COA1	Q9GZY4	146 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	GREM2	Q9H772	168 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	AS3MT	Q9HBK9	375 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	SLC5A4	Q9NY91	659 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	NOD1	Q9Y239	953 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	DISP2	A7MBM2	1401 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	ONECUT3	O60422	494 aa	Predicted RBP	10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	RAB11FIP3	O75154	756 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	GMPS	P49915	693 aa	Predicted RBP	10.08	□□□□□ -0.8

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