RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
PBRM1-216ENST00000449505 ANKRD18AQ8IVF6 992 aa8.86□□□□□ -0.99
PBRM1-216ENST00000449505 DBNDD1Q9H9R9 158 aa8.86□□□□□ -0.99
PBRM1-216ENST00000449505 PODXL2Q9NZ53 605 aa8.86□□□□□ -0.99
PBRM1-216ENST00000449505 PGAP2Q9UHJ9 254 aa8.86□□□□□ -0.99
PBRM1-216ENST00000449505 GGA1Q9UJY5 639 aa8.86□□□□□ -0.99
PBRM1-216ENST00000449505 IL16Q14005 1332 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 YDJCA8MPS7 323 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 TRAF5O00463 557 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 ELL2O00472 640 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-216ENST00000449505 PSMD14O00487 310 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 ZEB1P37275 1124 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-216ENST00000449505 GPSM2P81274 684 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 NOGQ13253 232 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 SAPCD2Q86UD0 394 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 SLC51AQ86UW1 340 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 TBC1D16Q8TBP0 767 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 DCPSQ96C86 337 aaKnown RBP8.85□□□□□ -0.99
PBRM1-216ENST00000449505 GPR101Q96P66 508 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-216ENST00000449505 METTL22Q9BUU2 404 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-216ENST00000449505 GLIS2Q9BZE0 524 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-216ENST00000449505 PHAXQ9H814 394 aaKnown RBP8.85□□□□□ -0.99
PBRM1-216ENST00000449505 ZNF408Q9H9D4 720 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 RTL9Q8NET4 1388 aa8.85□□□□□ -0.99
PBRM1-216ENST00000449505 PSME4Q14997 1843 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 HSPA8P11142 646 aaKnown RBP8.84□□□□□ -0.99
PBRM1-216ENST00000449505 ATP2B4P23634 1241 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 LBX1P52954 281 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
PBRM1-216ENST00000449505 CTSWP56202 376 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 CYP4F22Q6NT55 531 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 KSR2Q6VAB6 950 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 TRPM4Q8TD43 1214 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 MYH16Q9H6N6 1097 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 POLLQ9UGP5 575 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 MAP3K2Q9Y2U5 619 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 CACNA1FO60840 1977 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 MED23Q9ULK4 1368 aa8.84□□□□□ -0.99
PBRM1-216ENST00000449505 MYO3BQ8WXR4 1341 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 MMP14P50281 582 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 TWISTNBQ3B726 338 aaPredicted RBP8.83□□□□□ -1
PBRM1-216ENST00000449505 TBC1D10BQ4KMP7 808 aaPredicted RBP8.83□□□□□ -1
PBRM1-216ENST00000449505 CST9Q5W186 159 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 KRT26Q7Z3Y9 468 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 C2orf69Q8N8R5 385 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 C8orf58Q8NAV2 365 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 AGBL3Q8NEM8 1001 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 ZNF428Q96B54 188 aa8.83□□□□□ -1
PBRM1-216ENST00000449505 ZBTB12Q9Y330 459 aaPredicted RBP8.83□□□□□ -1
PBRM1-216ENST00000449505 PI4KAP2A4QPH2 592 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 ANP32CO43423 234 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
PBRM1-216ENST00000449505 HUNKP57058 714 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 DOK7Q18PE1 504 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 PODNQ7Z5L7 613 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 PI4KAP1Q8N8J0 262 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 SEC31BQ9NQW1 1179 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 GGA3Q9NZ52 723 aa8.82□□□□□ -1
PBRM1-216ENST00000449505 PITPNM2Q9BZ72 1349 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 VIL1P09327 827 aaKnown RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 HIRAP54198 1017 aaPredicted RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 FKBP1BP68106 108 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 SAMD7Q7Z3H4 446 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 USP48Q86UV5 1035 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 WWC1Q8IX03 1113 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 REM2Q8IYK8 340 aaPredicted RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 OGFOD1Q8N543 542 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 TSR2Q969E8 191 aaKnown RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 CCDC102AQ96A19 550 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 ANKRD2Q9GZV1 360 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 GBA2Q9HCG7 927 aaPredicted RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 MRS2Q9HD23 443 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 BSDC1Q9NW68 430 aaPredicted RBP8.81□□□□□ -1
PBRM1-216ENST00000449505 SPEF2Q9C093 1822 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 COL4A1P02462 1669 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 PAPPA2Q9BXP8 1791 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 SCN9AQ15858 1988 aa8.81□□□□□ -1
PBRM1-216ENST00000449505 USP17L3A6NCW0 530 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 USP17L4A6NCW7 530 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 NEURL1BA8MQ27 555 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 SLC4A2P04920 1241 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 USP17L8P0C7I0 530 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 ZNF280AP59817 542 aaPredicted RBP8.8□□□□□ -1
PBRM1-216ENST00000449505 FMR1Q06787 632 aaKnown RBP eCLIP8.8□□□□□ -16e-7■■■■□ 24.7
PBRM1-216ENST00000449505 FLIIQ13045 1269 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 RGMBQ6NW40 437 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 UBE3BQ7Z3V4 1068 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 CCDC85AQ96PX6 553 aaPredicted RBP8.8□□□□□ -1
PBRM1-216ENST00000449505 MPHOSPH8Q99549 860 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 SAGE1Q9NXZ1 904 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 LEMD3Q9Y2U8 911 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
PBRM1-216ENST00000449505 COL1A1P02452 1464 aaPredicted RBP8.79□□□□□ -1
PBRM1-216ENST00000449505 SHTN1A0MZ66 631 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms