RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CCDC151A5D8V7 595 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 FANCGO15287 622 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 SRGAP3O43295 1099 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 RESTQ13127 1097 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 SUGP1Q8IWZ8 645 aaKnown RBP10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 BRF1Q92994 677 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 ZSCAN12O43309 604 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 RPS6KA5O75582 802 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 GNG11P61952 73 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 NECTIN1Q15223 517 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 CREB3L3Q68CJ9 461 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 MMS22LQ6ZRQ5 1243 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 GOLPH3LQ9H4A5 285 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 RBM8AQ9Y5S9 174 aaKnown RBP10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 ADCY9O60503 1353 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 PSME1Q06323 249 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 ZSCAN16Q9H4T2 348 aaPredicted RBP10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 MAP2K7O14733 419 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 EIF3JO75822 258 aaKnown RBP10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 BRD3Q15059 726 aa10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 RSRC2Q7L4I2 434 aaKnown RBP10.92□□□□□ -0.66
SYNPO2-204ENST00000448416 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 CCDC30Q5VVM6 783 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 CDK19Q9BWU1 502 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 FAN1Q9Y2M0 1017 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 JAK2O60674 1132 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 TXLNAP40222 546 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 FAM160A1Q05DH4 1040 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 FSIP1Q8NA03 581 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 KCNB2Q92953 911 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 HDXQ7Z353 690 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 EFCAB13Q8IY85 973 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 MICALL1Q8N3F8 863 aa10.91□□□□□ -0.66
SYNPO2-204ENST00000448416 GLRX3O76003 335 aaKnown RBP10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 HSP90B2PQ58FF3 399 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 DNAAF4Q8WXU2 420 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 ZSWIM4Q9H7M6 989 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 COL9A3Q14050 684 aaPredicted RBP10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 RRS1Q15050 365 aaKnown RBP10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 ANKRD20A12PQ8NF67 263 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 SSH3Q8TE77 659 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 MRFAP1Q9Y605 127 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 KIF20BQ96Q89 1820 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 MAP2K2P36507 400 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 ME1P48163 572 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 DPCR1Q3MIW9 517 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 SULT6B1Q6IMI4 303 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 PPP1R42Q7Z4L9 355 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 CEP89Q96ST8 783 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 FTOQ9C0B1 505 aaKnown RBP eCLIP10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 RCOR1Q9UKL0 485 aa10.9□□□□□ -0.66
SYNPO2-204ENST00000448416 FLIIQ13045 1269 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 LRRC31Q6UY01 552 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 WDR24Q96S15 920 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 TSPYL4Q9UJ04 414 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 N4BP1O75113 896 aaKnown RBP10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 LMOD1P29536 600 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 FOSBP53539 338 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 TADA2BQ86TJ2 420 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 CCDC102AQ96A19 550 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 PLEKHA4Q9H4M7 779 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 DONSONQ9NYP3 566 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 ATP7AQ04656 1500 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 VWA3AA6NCI4 1184 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 PHACTR2O75167 634 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 SKIDA1Q1XH10 827 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 ENGASEQ8NFI3 743 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 AKAP2Q9Y2D5 859 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 PPP2R2CQ9Y2T4 447 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 ZCCHC11Q5TAX3 1644 aaKnown RBP10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 A0A087WUV0 522 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 SLC27A2O14975 620 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 ERLIN1O75477 346 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 GSCP56915 257 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 FANCCQ00597 558 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 OS9Q13438 667 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 PREX1Q8TCU6 1659 aa10.89□□□□□ -0.67
SYNPO2-204ENST00000448416 BIN1O00499 593 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 CPP00450 1065 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 RPS6KB1P23443 525 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 MNAT1P51948 309 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 USP44Q9H0E7 712 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 TOB2Q14106 344 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 DNAJC21Q5F1R6 531 aaKnown RBP10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 NBPF6Q5VWK0 638 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 NBPF4Q96M43 638 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 MROH1Q8NDA8 1641 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 BEND6Q5SZJ8 279 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 DHX58Q96C10 678 aa10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 BICC1Q9H694 974 aaKnown RBP10.88□□□□□ -0.67
SYNPO2-204ENST00000448416 GOLGA6L9A6NEM1 432 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms