RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CRAMP1Q96RY5 1269 aa24.04■■□□□ 1.44
SGCE-207ENST00000447873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.04■■□□□ 1.44
SGCE-207ENST00000447873 MASTLQ96GX5 879 aa24.03■■□□□ 1.44
SGCE-207ENST00000447873 AACSQ86V21 672 aa24.03■■□□□ 1.44
SGCE-207ENST00000447873 SGIP1Q9BQI5 828 aa24.03■■□□□ 1.44
SGCE-207ENST00000447873 KIF13BQ9NQT8 1826 aa24.02■■□□□ 1.44
SGCE-207ENST00000447873 BBOX1O75936 387 aa24.01■■□□□ 1.43
SGCE-207ENST00000447873 IFIT2P09913 472 aaKnown RBP24.01■■□□□ 1.43
SGCE-207ENST00000447873 ALDH1B1P30837 517 aa24.01■■□□□ 1.43
SGCE-207ENST00000447873 TNNI3KQ59H18 835 aa24.01■■□□□ 1.43
SGCE-207ENST00000447873 ZNF622Q969S3 477 aaKnown RBP eCLIP24.01■■□□□ 1.43
SGCE-207ENST00000447873 EAF2Q96CJ1 260 aaPredicted RBP24.01■■□□□ 1.43
SGCE-207ENST00000447873 GPR108Q9NPR9 543 aa24.01■■□□□ 1.43
SGCE-207ENST00000447873 AKAP2Q9Y2D5 859 aa24.01■■□□□ 1.43
SGCE-207ENST00000447873 FPGT-TNNI3KV9GXZ4 949 aa24.01■■□□□ 1.43
SGCE-207ENST00000447873 PDE8BO95263 885 aa24■■□□□ 1.43
SGCE-207ENST00000447873 PTGER2P43116 358 aa24■■□□□ 1.43
SGCE-207ENST00000447873 CHRNDQ07001 517 aa24■■□□□ 1.43
SGCE-207ENST00000447873 OTUD7AQ8TE49 926 aaPredicted RBP24■■□□□ 1.43
SGCE-207ENST00000447873 SPON1Q9HCB6 807 aa24■■□□□ 1.43
SGCE-207ENST00000447873 CHRNA5P30532 468 aa23.99■■□□□ 1.43
SGCE-207ENST00000447873 STYK1Q6J9G0 422 aa23.99■■□□□ 1.43
SGCE-207ENST00000447873 VGLL2Q8N8G2 317 aa23.99■■□□□ 1.43
SGCE-207ENST00000447873 HELBQ8NG08 1087 aaPredicted RBP23.99■■□□□ 1.43
SGCE-207ENST00000447873 MINPP1Q9UNW1 487 aa23.99■■□□□ 1.43
SGCE-207ENST00000447873 CACNA1SQ13698 1873 aa23.98■■□□□ 1.43
SGCE-207ENST00000447873 A0A1B0GUL6 1792 aa23.98■■□□□ 1.43
SGCE-207ENST00000447873 MX1P20591 662 aa23.98■■□□□ 1.43
SGCE-207ENST00000447873 TMC4Q7Z404 712 aa23.98■■□□□ 1.43
SGCE-207ENST00000447873 PLEKHM2Q8IWE5 1019 aa23.98■■□□□ 1.43
SGCE-207ENST00000447873 NEUROD6Q96NK8 337 aa23.98■■□□□ 1.43
SGCE-207ENST00000447873 CCDC8Q9H0W5 538 aaPredicted RBP23.98■■□□□ 1.43
SGCE-207ENST00000447873 TAF5LO75529 589 aa23.97■■□□□ 1.43
SGCE-207ENST00000447873 ANKRD2Q9GZV1 360 aa23.97■■□□□ 1.43
SGCE-207ENST00000447873 ZNF609O15014 1411 aa23.97■■□□□ 1.43
SGCE-207ENST00000447873 DLEC1Q9Y238 1755 aa23.96■■□□□ 1.43
SGCE-207ENST00000447873 A0A1B0GUL7 405 aa23.96■■□□□ 1.43
SGCE-207ENST00000447873 PPEF1O14829 653 aaPredicted RBP23.96■■□□□ 1.43
SGCE-207ENST00000447873 TIMM10P62072 90 aa23.96■■□□□ 1.43
SGCE-207ENST00000447873 PUM3Q15397 648 aaKnown RBP23.96■■□□□ 1.43
SGCE-207ENST00000447873 ATP2B3Q16720 1220 aa23.96■■□□□ 1.43
SGCE-207ENST00000447873 CNKSR1Q969H4 720 aa23.96■■□□□ 1.43
SGCE-207ENST00000447873 PPP1R1BQ9UD71 204 aaPredicted RBP23.96■■□□□ 1.43
SGCE-207ENST00000447873 SALL3Q9BXA9 1300 aa23.96■■□□□ 1.43
SGCE-207ENST00000447873 SOCS7O14512 581 aa23.95■■□□□ 1.43
SGCE-207ENST00000447873 PDE1AP54750 535 aa23.95■■□□□ 1.43
SGCE-207ENST00000447873 GPATCH3Q96I76 525 aa23.95■■□□□ 1.43
SGCE-207ENST00000447873 TGFB2P61812 414 aa23.95■■□□□ 1.42
SGCE-207ENST00000447873 KLHL34Q8N239 644 aa23.95■■□□□ 1.42
SGCE-207ENST00000447873 A0A0G2JLW4 131 aa23.94■■□□□ 1.42
SGCE-207ENST00000447873 TLR7Q9NYK1 1049 aaKnown RBP23.94■■□□□ 1.42
SGCE-207ENST00000447873 DBNLQ9UJU6 430 aaKnown RBP23.94■■□□□ 1.42
SGCE-207ENST00000447873 CD2APQ9Y5K6 639 aa23.94■■□□□ 1.42
SGCE-207ENST00000447873 DPEP1P16444 411 aa23.93■■□□□ 1.42
SGCE-207ENST00000447873 SP8Q8IXZ3 490 aa23.93■■□□□ 1.42
SGCE-207ENST00000447873 LPIN2Q92539 896 aa23.93■■□□□ 1.42
SGCE-207ENST00000447873 DBNDD2Q9BQY9 259 aa23.93■■□□□ 1.42
SGCE-207ENST00000447873 TMX4Q9H1E5 349 aaPredicted RBP23.93■■□□□ 1.42
SGCE-207ENST00000447873 OSBPL3Q9H4L5 887 aa23.93■■□□□ 1.42
SGCE-207ENST00000447873 ANKIB1Q9P2G1 1089 aa23.93■■□□□ 1.42
SGCE-207ENST00000447873 STAP2Q9UGK3 403 aa23.93■■□□□ 1.42
SGCE-207ENST00000447873 TTC41PQ6P2S7 1318 aa23.92■■□□□ 1.42
SGCE-207ENST00000447873 SLC5A1P13866 664 aa23.92■■□□□ 1.42
SGCE-207ENST00000447873 TSHZ3Q63HK5 1081 aa23.92■■□□□ 1.42
SGCE-207ENST00000447873 ECHDC1Q9NTX5 307 aa23.92■■□□□ 1.42
SGCE-207ENST00000447873 ATP6V0A2Q9Y487 856 aa23.92■■□□□ 1.42
SGCE-207ENST00000447873 SLX4Q8IY92 1834 aa23.92■■□□□ 1.42
SGCE-207ENST00000447873 LRRC37AA6NMS7 1700 aa23.92■■□□□ 1.42
SGCE-207ENST00000447873 FGFR2P21802 821 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 KCNJ4P48050 445 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 PRPF40BQ6NWY9 871 aaKnown RBP23.91■■□□□ 1.42
SGCE-207ENST00000447873 XAGE2Q96GT9 111 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 XDHP47989 1333 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 AOX1Q06278 1338 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 SNAP23O00161 211 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 IFIT1P09914 478 aaKnown RBP23.91■■□□□ 1.42
SGCE-207ENST00000447873 UBE4AQ14139 1066 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 GORABQ5T7V8 394 aa23.91■■□□□ 1.42
SGCE-207ENST00000447873 KIAA1551Q9HCM1 1747 aa23.9■■□□□ 1.42
SGCE-207ENST00000447873 ARAP2Q8WZ64 1704 aa23.9■■□□□ 1.42
SGCE-207ENST00000447873 ADORA1P30542 326 aa23.9■■□□□ 1.42
SGCE-207ENST00000447873 SLC51AQ86UW1 340 aa23.9■■□□□ 1.42
SGCE-207ENST00000447873 TTLL6Q8N841 843 aa23.9■■□□□ 1.42
SGCE-207ENST00000447873 NSFL1CQ9UNZ2 370 aaKnown RBP23.9■■□□□ 1.42
SGCE-207ENST00000447873 ERC2O15083 957 aa23.89■■□□□ 1.41
SGCE-207ENST00000447873 KCNA3P22001 575 aa23.89■■□□□ 1.41
SGCE-207ENST00000447873 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.41
SGCE-207ENST00000447873 GPSM2P81274 684 aa23.88■■□□□ 1.41
SGCE-207ENST00000447873 LEMD3Q9Y2U8 911 aa23.88■■□□□ 1.41
SGCE-207ENST00000447873 ZNF804BA4D1E1 1349 aa23.88■■□□□ 1.41
SGCE-207ENST00000447873 CCDC158Q5M9N0 1113 aa23.87■■□□□ 1.41
SGCE-207ENST00000447873 TTC22Q5TAA0 569 aa23.87■■□□□ 1.41
SGCE-207ENST00000447873 GLRX3O76003 335 aaKnown RBP23.86■■□□□ 1.41
SGCE-207ENST00000447873 PI4K2BQ8TCG2 481 aa23.86■■□□□ 1.41
SGCE-207ENST00000447873 PODXL2Q9NZ53 605 aa23.86■■□□□ 1.41
SGCE-207ENST00000447873 PIM2Q9P1W9 311 aa23.86■■□□□ 1.41
SGCE-207ENST00000447873 WTIPA6NIX2 430 aaPredicted RBP23.86■■□□□ 1.41
SGCE-207ENST00000447873 ZNF219Q9P2Y4 722 aaPredicted RBP23.86■■□□□ 1.41
SGCE-207ENST00000447873 GGA1Q9UJY5 639 aa23.86■■□□□ 1.41
SGCE-207ENST00000447873 UFL1O94874 794 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms