RNA–Protein interactions for RNA: ENST00000445537.6

PTPRO-204, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 4,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-204ENST00000445537 USP17L4A6NCW7 530 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 BCAR3O75815 825 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 MFSD14BQ5SR56 506 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 USP17L1Q7RTZ2 530 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 NLGN2Q8NFZ4 835 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 DENND2AQ9ULE3 1009 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 TTF2Q9UNY4 1162 aaKnown RBP6.32□□□□□ -1.4
PTPRO-204ENST00000445537 ZNF804BA4D1E1 1349 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 TAF5LO75529 589 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 TTF1Q15361 905 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-204ENST00000445537 PUM3Q15397 648 aaKnown RBP6.32□□□□□ -1.4
PTPRO-204ENST00000445537 PROSER3Q2NL68 480 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 VPS53Q5VIR6 699 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 KRT26Q7Z3Y9 468 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 PODNQ7Z5L7 613 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 TEKT1Q969V4 418 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 KIF1BPQ96EK5 621 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 LRRCC1Q9C099 1032 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 MROH5Q6ZUA9 1318 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 PLEKHG2Q9H7P9 1386 aa6.32□□□□□ -1.4
PTPRO-204ENST00000445537 PICALMQ13492 652 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 PROM2Q8N271 834 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 MYO3BQ8WXR4 1341 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 SHPRHQ149N8 1683 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 POLRMTO00411 1230 aaKnown RBP6.31□□□□□ -1.4
PTPRO-204ENST00000445537 TDO2P48775 406 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 PLEKHF1Q96S99 279 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 MTMR7Q9Y216 660 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 MYCNP04198 464 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-204ENST00000445537 TBC1D10BQ4KMP7 808 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-204ENST00000445537 NAA16Q6N069 864 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-204ENST00000445537 USP48Q86UV5 1035 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 COA1Q9GZY4 146 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 TCEAL9Q9UHQ7 104 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 ATP6V0A2Q9Y487 856 aa6.31□□□□□ -1.4
PTPRO-204ENST00000445537 RARSP54136 660 aaKnown RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 ARHGAP45Q92619 1136 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 PDGFDQ9GZP0 370 aaPredicted RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 IL1RAPL2Q9NP60 686 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 SLIT3O75094 1523 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 NBPF26B4DH59 902 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 EYA2O00167 538 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 SRGNP10124 158 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 EPHX2P34913 555 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 RASSF7Q02833 373 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 AAMPQ13685 434 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 NBPF10Q6P3W6 841 aaKnown RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 G2E3Q7L622 706 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 RALYLQ86SE5 291 aaKnown RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 SLC10A4Q96EP9 437 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 CNOT7Q9UIV1 285 aaKnown RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 NHSL1Q5SYE7 1610 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 RAB11FIP3O75154 756 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 IREB2P48200 963 aaKnown RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 CDC37L1Q7L3B6 337 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 TMEM57Q8N5G2 664 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 LPIN2Q92539 896 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 BICC1Q9H694 974 aaKnown RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 GREM2Q9H772 168 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 EXOC6BQ9Y2D4 811 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 AKAP17AQ02040 695 aaKnown RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 CHRNDQ07001 517 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 PDE3AQ14432 1141 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 SMCR8Q8TEV9 937 aaPredicted RBP6.3□□□□□ -1.4
PTPRO-204ENST00000445537 SEC31BQ9NQW1 1179 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 SNRKQ9NRH2 765 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 STRCP1A6NGW2 1772 aa6.3□□□□□ -1.4
PTPRO-204ENST00000445537 ECE2O60344 883 aa6.29□□□□□ -1.4
PTPRO-204ENST00000445537 ECM2O94769 699 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 UBE4AQ14139 1066 aa6.29□□□□□ -1.4
PTPRO-204ENST00000445537 SART3Q15020 963 aaKnown RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 CRNKL1Q9BZJ0 848 aaKnown RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 CCDC8Q9H0W5 538 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 DDNO94850 711 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 RRP12Q5JTH9 1297 aaKnown RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 ZNF444Q8N0Y2 327 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 ZNF594Q96JF6 807 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 BSDC1Q9NW68 430 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 RGPD8O14715 1765 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-204ENST00000445537 TOMM70O94826 608 aa6.29□□□□□ -1.4
PTPRO-204ENST00000445537 DDR1Q08345 913 aa6.29□□□□□ -1.4
PTPRO-204ENST00000445537 TMOD4Q9NZQ9 345 aa6.29□□□□□ -1.4
PTPRO-204ENST00000445537 HIP1O00291 1037 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 RGL2O15211 777 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 MARCH6O60337 910 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 HUNKP57058 714 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 KIF4BQ2VIQ3 1234 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 MICALL2Q8IY33 904 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 MRPL50Q8N5N7 158 aaKnown RBP6.28□□□□□ -1.4
PTPRO-204ENST00000445537 TULP1O00294 542 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-204ENST00000445537 CELF2O95319 508 aaKnown RBP6.28□□□□□ -1.4
PTPRO-204ENST00000445537 CYP7A1P22680 504 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 RPS12P25398 132 aaKnown RBP6.28□□□□□ -1.4
PTPRO-204ENST00000445537 SCNN1DP51172 638 aa6.28□□□□□ -1.4
PTPRO-204ENST00000445537 TRIM28Q13263 835 aaKnown RBP6.28□□□□□ -1.4
PTPRO-204ENST00000445537 CERS3Q8IU89 383 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms