RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
LINC00642-203ENST00000444942 ELL2O00472 640 aaPredicted RBP11.95□□□□□ -0.5
LINC00642-203ENST00000444942 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
LINC00642-203ENST00000444942 EGFRP00533 1210 aa11.95□□□□□ -0.5
LINC00642-203ENST00000444942 ANXA1P04083 346 aa11.95□□□□□ -0.5
LINC00642-203ENST00000444942 TBC1D10BQ4KMP7 808 aaPredicted RBP11.95□□□□□ -0.5
LINC00642-203ENST00000444942 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
LINC00642-203ENST00000444942 DPF2Q92785 391 aa11.95□□□□□ -0.5
LINC00642-203ENST00000444942 TSR2Q969E8 191 aaKnown RBP11.95□□□□□ -0.5
LINC00642-203ENST00000444942 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00642-203ENST00000444942 STXBP5LQ9Y2K9 1186 aa11.95□□□□□ -0.5
LINC00642-203ENST00000444942 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 NEFLP07196 543 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 GNAI1P63096 354 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
LINC00642-203ENST00000444942 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 SUPT20HQ8NEM7 779 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 RPGRQ92834 1020 aaKnown RBP11.94□□□□□ -0.5
LINC00642-203ENST00000444942 ZNF333Q96JL9 665 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
LINC00642-203ENST00000444942 ABCC12Q96J65 1359 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 LAMB1P07942 1786 aa11.94□□□□□ -0.5
LINC00642-203ENST00000444942 TCERG1O14776 1098 aaKnown RBP11.93□□□□□ -0.5
LINC00642-203ENST00000444942 RGL2O15211 777 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 GTF2E1P29083 439 aaPredicted RBP11.93□□□□□ -0.5
LINC00642-203ENST00000444942 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 CRAMP1Q96RY5 1269 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 BABAM1Q9NWV8 329 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 ZNF609O15014 1411 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 TTC28Q96AY4 2481 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 NUP98P52948 1817 aa11.93□□□□□ -0.5
LINC00642-203ENST00000444942 ZNF853P0CG23 659 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00642-203ENST00000444942 MPNDQ8N594 471 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
LINC00642-203ENST00000444942 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 YDJCA8MPS7 323 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 COL9A1P20849 921 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 CCDC27Q2M243 656 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 PROSER3Q2NL68 480 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 DPF3Q92784 378 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 RBM17Q96I25 401 aaKnown RBP11.92□□□□□ -0.5
LINC00642-203ENST00000444942 GGA3Q9NZ52 723 aa11.92□□□□□ -0.5
LINC00642-203ENST00000444942 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
LINC00642-203ENST00000444942 AIMP1Q12904 312 aaKnown RBP11.91□□□□□ -0.5
LINC00642-203ENST00000444942 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
LINC00642-203ENST00000444942 HDGFL1Q5TGJ6 251 aa11.91□□□□□ -0.5
LINC00642-203ENST00000444942 TTLL7Q6ZT98 887 aa11.91□□□□□ -0.5
LINC00642-203ENST00000444942 C8orf58Q8NAV2 365 aa11.91□□□□□ -0.5
LINC00642-203ENST00000444942 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
LINC00642-203ENST00000444942 TMX4Q9H1E5 349 aaPredicted RBP11.91□□□□□ -0.5
LINC00642-203ENST00000444942 ATP6V0A2Q9Y487 856 aa11.91□□□□□ -0.5
LINC00642-203ENST00000444942 SUPT16HQ9Y5B9 1047 aaKnown RBP11.91□□□□□ -0.5
LINC00642-203ENST00000444942 TAF1P21675 1872 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 DDX60Q8IY21 1712 aaKnown RBP11.9□□□□□ -0.5
LINC00642-203ENST00000444942 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 SLC4A8Q2Y0W8 1093 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 MOB2Q70IA6 237 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 DEFB123Q8N688 67 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 TSPYL6Q8N831 410 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 ZBTB3Q9H5J0 574 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
LINC00642-203ENST00000444942 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.5
LINC00642-203ENST00000444942 ZNF646O15015 1829 aaPredicted RBP11.89□□□□□ -0.51
LINC00642-203ENST00000444942 HLFQ16534 295 aa11.89□□□□□ -0.51
LINC00642-203ENST00000444942 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
LINC00642-203ENST00000444942 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
LINC00642-203ENST00000444942 NYXQ9GZU5 481 aa11.89□□□□□ -0.51
LINC00642-203ENST00000444942 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
LINC00642-203ENST00000444942 ASTN2O75129 1339 aaPredicted RBP11.89□□□□□ -0.51
LINC00642-203ENST00000444942 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
LINC00642-203ENST00000444942 WTIPA6NIX2 430 aaPredicted RBP11.88□□□□□ -0.51
LINC00642-203ENST00000444942 PSMD14O00487 310 aa11.88□□□□□ -0.51
LINC00642-203ENST00000444942 RPS12P25398 132 aaKnown RBP11.88□□□□□ -0.51
LINC00642-203ENST00000444942 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
LINC00642-203ENST00000444942 PDIA6Q15084 440 aa11.88□□□□□ -0.51
LINC00642-203ENST00000444942 KIF4BQ2VIQ3 1234 aa11.88□□□□□ -0.51
LINC00642-203ENST00000444942 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
LINC00642-203ENST00000444942 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
LINC00642-203ENST00000444942 NBPF11Q86T75 865 aa11.88□□□□□ -0.51
LINC00642-203ENST00000444942 WDR63Q8IWG1 891 aa11.88□□□□□ -0.51
LINC00642-203ENST00000444942 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
LINC00642-203ENST00000444942 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
LINC00642-203ENST00000444942 COPS6Q7L5N1 327 aa11.87□□□□□ -0.51
LINC00642-203ENST00000444942 XAGE3Q8WTP9 111 aa11.87□□□□□ -0.51
LINC00642-203ENST00000444942 MTMR10Q9NXD2 777 aa11.87□□□□□ -0.51
LINC00642-203ENST00000444942 DUOX1Q9NRD9 1551 aa11.87□□□□□ -0.51
LINC00642-203ENST00000444942 IL16Q14005 1332 aa11.87□□□□□ -0.51
LINC00642-203ENST00000444942 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 GPTP24298 496 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 PLA2G5P39877 138 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 TWISTNBQ3B726 338 aaPredicted RBP11.86□□□□□ -0.51
LINC00642-203ENST00000444942 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 Q7L0L9 218 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms