RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 EYA3Q99504 573 aa21.91■■□□□ 1.1
SMARCAL1-209ENST00000444508 GGA1Q9UJY5 639 aa21.91■■□□□ 1.1
SMARCAL1-209ENST00000444508 RCAN3Q9UKA8 241 aa21.91■■□□□ 1.1
SMARCAL1-209ENST00000444508 TNNQ9UQP3 1299 aa21.91■■□□□ 1.1
SMARCAL1-209ENST00000444508 LTBP1Q14766 1721 aa21.9■■□□□ 1.1
SMARCAL1-209ENST00000444508 UFL1O94874 794 aa21.9■■□□□ 1.1
SMARCAL1-209ENST00000444508 KIAA2012Q0VF49 1180 aa21.9■■□□□ 1.1
SMARCAL1-209ENST00000444508 WASHC4Q2M389 1173 aa21.9■■□□□ 1.1
SMARCAL1-209ENST00000444508 RABL6Q3YEC7 729 aaPredicted RBP21.9■■□□□ 1.1
SMARCAL1-209ENST00000444508 TBC1D16Q8TBP0 767 aa21.9■■□□□ 1.1
SMARCAL1-209ENST00000444508 MINPP1Q9UNW1 487 aa21.9■■□□□ 1.1
SMARCAL1-209ENST00000444508 DZIP1LQ8IYY4 767 aaKnown RBP21.89■■□□□ 1.09
SMARCAL1-209ENST00000444508 ANKRD44Q8N8A2 993 aa21.89■■□□□ 1.09
SMARCAL1-209ENST00000444508 POLLQ9UGP5 575 aa21.89■■□□□ 1.09
SMARCAL1-209ENST00000444508 FZD9O00144 591 aa21.88■■□□□ 1.09
SMARCAL1-209ENST00000444508 GNAI3P08754 354 aa21.88■■□□□ 1.09
SMARCAL1-209ENST00000444508 EIF6P56537 245 aaKnown RBP21.88■■□□□ 1.09
SMARCAL1-209ENST00000444508 MEIS3Q99687 375 aa21.88■■□□□ 1.09
SMARCAL1-209ENST00000444508 ANKRD2Q9GZV1 360 aa21.88■■□□□ 1.09
SMARCAL1-209ENST00000444508 COL4A5P29400 1685 aa21.88■■□□□ 1.09
SMARCAL1-209ENST00000444508 ATP2B4P23634 1241 aa21.87■■□□□ 1.09
SMARCAL1-209ENST00000444508 TMEM57Q8N5G2 664 aa21.87■■□□□ 1.09
SMARCAL1-209ENST00000444508 ZNF594Q96JF6 807 aaPredicted RBP21.87■■□□□ 1.09
SMARCAL1-209ENST00000444508 ZC3H12CQ9C0D7 883 aaKnown RBP21.87■■□□□ 1.09
SMARCAL1-209ENST00000444508 ZNF541Q9H0D2 1346 aa21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 RIMBP2O15034 1052 aa21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 MS4A1P11836 297 aa21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 LDHAL6AQ6ZMR3 332 aa21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 NMRK2Q9NPI5 230 aa21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 CNNM1Q9NRU3 951 aa21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 ZNRF3Q9ULT6 936 aa21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 LRRFIP2Q9Y608 721 aaKnown RBP21.86■■□□□ 1.09
SMARCAL1-209ENST00000444508 G3V3G9 751 aa21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 DDNO94850 711 aaPredicted RBP21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 CHRNDQ07001 517 aa21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 DCAF8Q5TAQ9 597 aa21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 ITPRIPQ8IWB1 547 aa21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 RRAGCQ9HB90 399 aa21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 LEMD3Q9Y2U8 911 aa21.84■■□□□ 1.09
SMARCAL1-209ENST00000444508 KCNJ4P48050 445 aa21.83■■□□□ 1.09
SMARCAL1-209ENST00000444508 GPC2Q8N158 579 aa21.83■■□□□ 1.09
SMARCAL1-209ENST00000444508 WDR90Q96KV7 1748 aa21.83■■□□□ 1.08
SMARCAL1-209ENST00000444508 GJA3Q9Y6H8 435 aa21.82■■□□□ 1.08
SMARCAL1-209ENST00000444508 ZNF804BA4D1E1 1349 aa21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 KIF3CO14782 793 aa21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 GNAI2P04899 355 aa21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 RLBP1P12271 317 aa21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 VEGFAP15692 232 aaPredicted RBP21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 C16orf71Q8IYS4 520 aaPredicted RBP21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 DBNDD1Q9H9R9 158 aa21.81■■□□□ 1.08
SMARCAL1-209ENST00000444508 MED23Q9ULK4 1368 aa21.8■■□□□ 1.08
SMARCAL1-209ENST00000444508 ECE2O60344 883 aa21.8■■□□□ 1.08
SMARCAL1-209ENST00000444508 DOK7Q18PE1 504 aa21.8■■□□□ 1.08
SMARCAL1-209ENST00000444508 HELBQ8NG08 1087 aaPredicted RBP21.8■■□□□ 1.08
SMARCAL1-209ENST00000444508 PANK1Q8TE04 598 aa21.8■■□□□ 1.08
SMARCAL1-209ENST00000444508 L3MBTL3Q96JM7 780 aaPredicted RBP21.8■■□□□ 1.08
SMARCAL1-209ENST00000444508 A0A1B0GUL6 1792 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 IQCA1LA6NCM1 817 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 PLIN1O60240 522 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 TAF5LO75529 589 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 CXCL9Q07325 125 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 TNIP1Q15025 636 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 CIAPIN1Q6FI81 312 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 PUS3Q9BZE2 481 aaKnown RBP21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 MROH5Q6ZUA9 1318 aa21.79■■□□□ 1.08
SMARCAL1-209ENST00000444508 RAD17O75943 681 aa21.78■■□□□ 1.08
SMARCAL1-209ENST00000444508 KLHDC4Q8TBB5 520 aa21.78■■□□□ 1.08
SMARCAL1-209ENST00000444508 WTIPA6NIX2 430 aaPredicted RBP21.77■■□□□ 1.08
SMARCAL1-209ENST00000444508 YDJCA8MPS7 323 aa21.77■■□□□ 1.08
SMARCAL1-209ENST00000444508 RFX5P48382 616 aaPredicted RBP21.77■■□□□ 1.08
SMARCAL1-209ENST00000444508 SCN4AP35499 1836 aa21.77■■□□□ 1.08
SMARCAL1-209ENST00000444508 LMOD1P29536 600 aaPredicted RBP21.76■■□□□ 1.07
SMARCAL1-209ENST00000444508 PTPN12Q05209 780 aaKnown RBP21.76■■□□□ 1.07
SMARCAL1-209ENST00000444508 LRRC24Q50LG9 513 aa21.76■■□□□ 1.07
SMARCAL1-209ENST00000444508 METTL24Q5JXM2 366 aa21.76■■□□□ 1.07
SMARCAL1-209ENST00000444508 HACL1Q9UJ83 578 aa21.76■■□□□ 1.07
SMARCAL1-209ENST00000444508 RIPOR2Q9Y4F9 1068 aa21.76■■□□□ 1.07
SMARCAL1-209ENST00000444508 POTECB2RU33 542 aa21.75■■□□□ 1.07
SMARCAL1-209ENST00000444508 EYA2O00167 538 aa21.75■■□□□ 1.07
SMARCAL1-209ENST00000444508 SRGAP3O43295 1099 aa21.75■■□□□ 1.07
SMARCAL1-209ENST00000444508 TOMM70O94826 608 aa21.75■■□□□ 1.07
SMARCAL1-209ENST00000444508 MTX1Q13505 466 aa21.75■■□□□ 1.07
SMARCAL1-209ENST00000444508 ZBTB7BO15156 539 aaPredicted RBP21.74■■□□□ 1.07
SMARCAL1-209ENST00000444508 PODNQ7Z5L7 613 aa21.74■■□□□ 1.07
SMARCAL1-209ENST00000444508 COA1Q9GZY4 146 aa21.74■■□□□ 1.07
SMARCAL1-209ENST00000444508 FBXO3Q9UK99 471 aa21.74■■□□□ 1.07
SMARCAL1-209ENST00000444508 SNAP23O00161 211 aa21.73■■□□□ 1.07
SMARCAL1-209ENST00000444508 UBE4AQ14139 1066 aa21.73■■□□□ 1.07
SMARCAL1-209ENST00000444508 MVPQ14764 893 aaKnown RBP21.73■■□□□ 1.07
SMARCAL1-209ENST00000444508 TXNRD3Q86VQ6 643 aa21.73■■□□□ 1.07
SMARCAL1-209ENST00000444508 SIL1Q9H173 461 aa21.73■■□□□ 1.07
SMARCAL1-209ENST00000444508 PSMD14O00487 310 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 CIAO1O76071 339 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 KLRK1P26718 216 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 GMPSP49915 693 aaPredicted RBP21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 C1QTNF8P60827 252 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 PDE3AQ14432 1141 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 C15orf52Q6ZUT6 534 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms