RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MTX1Q13505 466 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 PGBD1Q96JS3 809 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 PPFIA3O75145 1194 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 GBP6Q6ZN66 633 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 SIL1Q9H173 461 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 PLB1Q6P1J6 1458 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 JAK2O60674 1132 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 PACS2Q86VP3 889 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 CCDC148Q8NFR7 591 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 CUL7Q14999 1698 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 EIF2S2P20042 333 aaKnown RBP5.77□□□□□ -1.49
HERC1-201ENST00000443617 MLECQ14165 292 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 FOXR1Q6PIV2 292 aa5.77□□□□□ -1.49
HERC1-201ENST00000443617 H3BQF6 201 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 TTC21AQ8NDW8 1320 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 IQCEQ6IPM2 695 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 PRDM15P57071 1507 aaPredicted RBP5.76□□□□□ -1.49
HERC1-201ENST00000443617 KCNJ6P48051 423 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 NMIQ13287 307 aaPredicted RBP5.76□□□□□ -1.49
HERC1-201ENST00000443617 WWC2Q6AWC2 1192 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 DONSONQ9NYP3 566 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 ZNF202O95125 648 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 PNMA6EA0A0J9YXQ4 647 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 NUTM2FA1L443 756 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 NUTM2GQ5VZR2 741 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 CCDC102BQ68D86 513 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 CCDC151A5D8V7 595 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 CCDC175P0C221 793 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 ABCB6Q9NP58 842 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 SYKP43405 635 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 CLNS1AP54105 237 aaKnown RBP5.76□□□□□ -1.49
HERC1-201ENST00000443617 G2E3Q7L622 706 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 RPAINQ86UA6 219 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 BCCIPQ9P287 314 aaKnown RBP eCLIP5.76□□□□□ -1.49
HERC1-201ENST00000443617 IQGAP2Q13576 1575 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 TTC21BQ7Z4L5 1316 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 SPTLC2O15270 562 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA8FQ08AF8 430 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA8DPQ0D2H9 430 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 JPH2Q9BR39 696 aaPredicted RBP5.76□□□□□ -1.49
HERC1-201ENST00000443617 CCT2P78371 535 aaKnown RBP5.76□□□□□ -1.49
HERC1-201ENST00000443617 WHAMMP3Q1A5X7 153 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 CEP57Q86XR8 500 aa5.76□□□□□ -1.49
HERC1-201ENST00000443617 GOLIM4O00461 696 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 MMP14P50281 582 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 IQUBQ8NA54 791 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 CCT5P48643 541 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 CCDC50Q8IVM0 306 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 LZTFL1Q9NQ48 299 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 RPS6KA5O75582 802 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 MYCNP04198 464 aaPredicted RBP5.75□□□□□ -1.49
HERC1-201ENST00000443617 ADCK5Q3MIX3 580 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 RUFY1Q96T51 708 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 FILIP1LQ4L180 1135 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 EIF4G3O43432 1585 aaKnown RBP5.75□□□□□ -1.49
HERC1-201ENST00000443617 HMGB1P09429 215 aaKnown RBP5.75□□□□□ -1.49
HERC1-201ENST00000443617 EPC1Q9H2F5 836 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 PLEKHA4Q9H4M7 779 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 RTEL1Q9NZ71 1219 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 KIAA1468Q9P260 1216 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 A6NNZ2 444 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 TUBB8Q3ZCM7 444 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 PCDHA7Q9UN72 937 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 PTCH1Q13635 1447 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 PLEKHG2Q9H7P9 1386 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 TRDNQ13061 729 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 ZNF569Q5MCW4 686 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 NAPGQ99747 312 aaPredicted RBP5.75□□□□□ -1.49
HERC1-201ENST00000443617 CC2D2AQ9P2K1 1620 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 IPO7O95373 1038 aaKnown RBP5.75□□□□□ -1.49
HERC1-201ENST00000443617 FUT8Q9BYC5 575 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 TOGARAM2Q6ZUX3 1019 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 FCHSD1Q86WN1 690 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 VSTM4Q8IW00 320 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 BPIFA3Q9BQP9 254 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 C8orf76Q96K31 380 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 UBXN6Q9BZV1 441 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 SYNJ2O15056 1496 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 TRAPPC8Q9Y2L5 1435 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 CCDC121Q6ZUS5 278 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 VEZTQ9HBM0 779 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 FANCLQ9NW38 375 aa5.75□□□□□ -1.49
HERC1-201ENST00000443617 POLR3DP05423 398 aaPredicted RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 RSRC2Q7L4I2 434 aaKnown RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 MAP3K9P80192 1104 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 POLA2Q14181 598 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 CCDC9Q9Y3X0 531 aaKnown RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 OPA1O60313 960 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 STIM1Q13586 685 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 TAF7Q15545 349 aaPredicted RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 CDC23Q9UJX2 597 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA6CA6NDK9 693 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 AKR1B15C9JRZ8 316 aaPredicted RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 LARGE1O95461 756 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA6DP0CG33 693 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 DPCR1Q3MIW9 517 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 NOC3LQ8WTT2 800 aaKnown RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 DESI2Q9BSY9 194 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA6AQ9NYA3 693 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 MRFAP1Q9Y605 127 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms