RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 DDX60Q8IY21 1712 aaKnown RBP17.68■□□□□ 0.42
LINC00299-202ENST00000442956 MROH5Q6ZUA9 1318 aa17.68■□□□□ 0.42
LINC00299-202ENST00000442956 ABCC12Q96J65 1359 aa17.68■□□□□ 0.42
LINC00299-202ENST00000442956 NMIQ13287 307 aaPredicted RBP17.68■□□□□ 0.42
LINC00299-202ENST00000442956 CCDC158Q5M9N0 1113 aa17.68■□□□□ 0.42
LINC00299-202ENST00000442956 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
LINC00299-202ENST00000442956 KIAA1211Q6ZU35 1233 aa17.68■□□□□ 0.42
LINC00299-202ENST00000442956 DDX46Q7L014 1031 aaKnown RBP17.68■□□□□ 0.42
LINC00299-202ENST00000442956 LRP5O75197 1615 aa17.68■□□□□ 0.42
LINC00299-202ENST00000442956 IFIT1P09914 478 aaKnown RBP17.67■□□□□ 0.42
LINC00299-202ENST00000442956 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
LINC00299-202ENST00000442956 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
LINC00299-202ENST00000442956 LSG1Q9H089 658 aaKnown RBP17.67■□□□□ 0.42
LINC00299-202ENST00000442956 TTC39AQ5SRH9 613 aa17.67■□□□□ 0.42
LINC00299-202ENST00000442956 TPTE2Q6XPS3 522 aa17.67■□□□□ 0.42
LINC00299-202ENST00000442956 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
LINC00299-202ENST00000442956 RAD50Q92878 1312 aa17.67■□□□□ 0.42
LINC00299-202ENST00000442956 GOLIM4O00461 696 aa17.66■□□□□ 0.42
LINC00299-202ENST00000442956 HELBQ8NG08 1087 aaPredicted RBP17.66■□□□□ 0.42
LINC00299-202ENST00000442956 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC00299-202ENST00000442956 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
LINC00299-202ENST00000442956 A0A0D9SFI3 127 aa17.66■□□□□ 0.42
LINC00299-202ENST00000442956 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
LINC00299-202ENST00000442956 KBTBD3Q8NAB2 608 aa17.66■□□□□ 0.42
LINC00299-202ENST00000442956 CDC5LQ99459 802 aaKnown RBP17.66■□□□□ 0.42
LINC00299-202ENST00000442956 PALD1Q9ULE6 856 aa17.66■□□□□ 0.42
LINC00299-202ENST00000442956 LAMB2P55268 1798 aa17.66■□□□□ 0.42
LINC00299-202ENST00000442956 APBA3O96018 575 aa17.65■□□□□ 0.42
LINC00299-202ENST00000442956 SSFA2P28290 1259 aa17.65■□□□□ 0.42
LINC00299-202ENST00000442956 PUM3Q15397 648 aaKnown RBP17.65■□□□□ 0.42
LINC00299-202ENST00000442956 HSPA4P34932 840 aa17.65■□□□□ 0.42
LINC00299-202ENST00000442956 ANAPC15P60006 121 aa17.65■□□□□ 0.42
LINC00299-202ENST00000442956 NFIXQ14938 502 aa17.65■□□□□ 0.42
LINC00299-202ENST00000442956 RFX7Q2KHR2 1363 aa17.65■□□□□ 0.42
LINC00299-202ENST00000442956 PLSCR1O15162 318 aa17.64■□□□□ 0.41
LINC00299-202ENST00000442956 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
LINC00299-202ENST00000442956 NLRP3Q96P20 1036 aa17.64■□□□□ 0.41
LINC00299-202ENST00000442956 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
LINC00299-202ENST00000442956 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
LINC00299-202ENST00000442956 FKBP4Q02790 459 aaKnown RBP eCLIP17.64■□□□□ 0.41
LINC00299-202ENST00000442956 POTEAQ6S8J7 498 aa17.64■□□□□ 0.41
LINC00299-202ENST00000442956 LPIN2Q92539 896 aa17.64■□□□□ 0.41
LINC00299-202ENST00000442956 SNRKQ9NRH2 765 aa17.64■□□□□ 0.41
LINC00299-202ENST00000442956 CARMIL3Q8ND23 1372 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 NPHP1O15259 732 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 TAF5LO75529 589 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 FGFR2P21802 821 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 PTH1RQ03431 593 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 ANKRD18AQ8IVF6 992 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 COL24A1Q17RW2 1714 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 GYS1P13807 737 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 SCARF1Q14162 830 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 FBXO41Q8TF61 875 aa17.63■□□□□ 0.41
LINC00299-202ENST00000442956 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
LINC00299-202ENST00000442956 CHGBP05060 677 aa17.62■□□□□ 0.41
LINC00299-202ENST00000442956 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
LINC00299-202ENST00000442956 ANTXR1Q9H6X2 564 aa17.62■□□□□ 0.41
LINC00299-202ENST00000442956 MED23Q9ULK4 1368 aa17.62■□□□□ 0.41
LINC00299-202ENST00000442956 K7ELQ4 463 aaPredicted RBP17.61■□□□□ 0.41
LINC00299-202ENST00000442956 IL17RAQ96F46 866 aa17.61■□□□□ 0.41
LINC00299-202ENST00000442956 SNAP23O00161 211 aa17.61■□□□□ 0.41
LINC00299-202ENST00000442956 SLC5A1P13866 664 aa17.61■□□□□ 0.41
LINC00299-202ENST00000442956 CHRNDQ07001 517 aa17.61■□□□□ 0.41
LINC00299-202ENST00000442956 ZNF589Q86UQ0 364 aaPredicted RBP17.61■□□□□ 0.41
LINC00299-202ENST00000442956 UBR3Q6ZT12 1888 aa17.61■□□□□ 0.41
LINC00299-202ENST00000442956 ST18O60284 1047 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 CCDC102BQ68D86 513 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 ZNF512BQ96KM6 892 aaPredicted RBP17.6■□□□□ 0.41
LINC00299-202ENST00000442956 COL4A1P02462 1669 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 ZAP70P43403 619 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 PHKA1P46020 1223 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 PI16Q6UXB8 463 aa17.6■□□□□ 0.41
LINC00299-202ENST00000442956 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
LINC00299-202ENST00000442956 BSDC1Q9NW68 430 aaPredicted RBP17.6■□□□□ 0.41
LINC00299-202ENST00000442956 MCAMP43121 646 aa17.59■□□□□ 0.41
LINC00299-202ENST00000442956 TFCP2L1Q9NZI6 479 aa17.59■□□□□ 0.41
LINC00299-202ENST00000442956 NEK4P51957 841 aa17.59■□□□□ 0.41
LINC00299-202ENST00000442956 ZNF827Q17R98 1081 aa17.59■□□□□ 0.41
LINC00299-202ENST00000442956 MAP4K1Q92918 833 aa17.59■□□□□ 0.41
LINC00299-202ENST00000442956 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
LINC00299-202ENST00000442956 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.41
LINC00299-202ENST00000442956 RASEFQ8IZ41 740 aa17.58■□□□□ 0.41
LINC00299-202ENST00000442956 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.41
LINC00299-202ENST00000442956 UQCRFS1P1P0C7P4 283 aa17.58■□□□□ 0.4
LINC00299-202ENST00000442956 ARID4AP29374 1257 aaPredicted RBP17.58■□□□□ 0.4
LINC00299-202ENST00000442956 KCNJ4P48050 445 aa17.58■□□□□ 0.4
LINC00299-202ENST00000442956 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
LINC00299-202ENST00000442956 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.4
LINC00299-202ENST00000442956 PRPF40BQ6NWY9 871 aaKnown RBP17.58■□□□□ 0.4
LINC00299-202ENST00000442956 ANP32EQ9BTT0 268 aa17.58■□□□□ 0.4
LINC00299-202ENST00000442956 RBM8AQ9Y5S9 174 aaKnown RBP17.58■□□□□ 0.4
LINC00299-202ENST00000442956 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
LINC00299-202ENST00000442956 TM4SF1P30408 202 aa17.57■□□□□ 0.4
LINC00299-202ENST00000442956 PRR5LQ6MZQ0 368 aa17.57■□□□□ 0.4
LINC00299-202ENST00000442956 CCDC129Q6ZRS4 1044 aa17.57■□□□□ 0.4
LINC00299-202ENST00000442956 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
LINC00299-202ENST00000442956 MINPP1Q9UNW1 487 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms