RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 KIAA1524Q8TCG1 905 aa19.48■□□□□ 0.71
SEMA3B-207ENST00000441915 CHGBP05060 677 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 HMGB1P09429 215 aaKnown RBP19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 LUZP1Q86V48 1076 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 CLSTN2Q9H4D0 955 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 CFAP45Q9UL16 551 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 CYP27B1O15528 508 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 ANO6Q4KMQ2 910 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 RBM43Q6ZSC3 357 aaKnown RBP19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 KCNF1Q9H3M0 494 aa19.47■□□□□ 0.71
SEMA3B-207ENST00000441915 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 CABP4P57796 275 aa19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 RESTQ13127 1097 aa19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 SH3TC1Q8TE82 1336 aa19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 ALS2Q96Q42 1657 aa19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 NR1I2O75469 434 aa19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 CASP7P55210 303 aa19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 DDX11Q96FC9 970 aa19.46■□□□□ 0.71
SEMA3B-207ENST00000441915 SCRN1Q12765 414 aa19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 PGBD1Q96JS3 809 aa19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 LLPHQ9BRT6 129 aaKnown RBP19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 CBX8Q9HC52 389 aa19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 A0A0U1RQG5 324 aaPredicted RBP19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 NEUROD6Q96NK8 337 aa19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 ARFGEF2Q9Y6D5 1785 aa19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 PLEKHG2Q9H7P9 1386 aa19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 LRRC2Q9BYS8 371 aa19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
SEMA3B-207ENST00000441915 DHX32Q7L7V1 743 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-207ENST00000441915 SMARCC2Q8TAQ2 1214 aa19.44■□□□□ 0.7
SEMA3B-207ENST00000441915 GTF2F1P35269 517 aaKnown RBP eCLIP19.44■□□□□ 0.71e-7■□□□□ 9.8
SEMA3B-207ENST00000441915 HELLSQ9NRZ9 838 aa19.44■□□□□ 0.7
SEMA3B-207ENST00000441915 PYCARDQ9ULZ3 195 aa19.44■□□□□ 0.7
SEMA3B-207ENST00000441915 ABCC6O95255 1503 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 PALLDQ8WX93 1383 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 GOLIM4O00461 696 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 PFKFB2O60825 505 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 PAG1Q9NWQ8 432 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 KIF3AQ9Y496 699 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 STOX1Q6ZVD7 989 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 DSCC1Q9BVC3 393 aa19.43■□□□□ 0.7
SEMA3B-207ENST00000441915 ZNF165P49910 485 aa19.42■□□□□ 0.7
SEMA3B-207ENST00000441915 FOXO4P98177 505 aa19.42■□□□□ 0.7
SEMA3B-207ENST00000441915 H7C1W4 665 aa19.42■□□□□ 0.7
SEMA3B-207ENST00000441915 CAVIN2O95810 425 aa19.42■□□□□ 0.7
SEMA3B-207ENST00000441915 CHAF1AQ13111 956 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-207ENST00000441915 TICAM2Q86XR7 235 aa19.42■□□□□ 0.7
SEMA3B-207ENST00000441915 ATF3P18847 181 aa19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 DRC7Q8IY82 874 aa19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 TRIM5Q9C035 493 aa19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 GPR108Q9NPR9 543 aa19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 IL15P40933 162 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 NAA16Q6N069 864 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 ATG9AQ7Z3C6 839 aa19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 NSUN7Q8NE18 718 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 TDRD7Q8NHU6 1098 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-207ENST00000441915 PTGS1P23219 599 aa19.4■□□□□ 0.7
SEMA3B-207ENST00000441915 TIMM10P62072 90 aa19.4■□□□□ 0.7
SEMA3B-207ENST00000441915 CABLES1Q8TDN4 633 aa19.4■□□□□ 0.7
SEMA3B-207ENST00000441915 DDX17Q92841 729 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-207ENST00000441915 CWC25Q9NXE8 425 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-207ENST00000441915 CEBPZQ03701 1054 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-207ENST00000441915 DNAJC25Q9H1X3 360 aa19.4■□□□□ 0.7
SEMA3B-207ENST00000441915 APOBRQ0VD83 1088 aa19.39■□□□□ 0.7
SEMA3B-207ENST00000441915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.39■□□□□ 0.7
SEMA3B-207ENST00000441915 COL18A1P39060 1754 aa19.39■□□□□ 0.69
SEMA3B-207ENST00000441915 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
SEMA3B-207ENST00000441915 ZMYM1Q5SVZ6 1142 aa19.39■□□□□ 0.69
SEMA3B-207ENST00000441915 CCDC186Q7Z3E2 898 aa19.39■□□□□ 0.69
SEMA3B-207ENST00000441915 EXOSC10Q01780 885 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 PLA2G4DQ86XP0 818 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 SMAP1Q8IYB5 467 aaPredicted RBP19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 AGXT2Q9BYV1 514 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 NBPF26B4DH59 902 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 HSPD1P10809 573 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 ZNF75DP51815 510 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 SLFNL1Q499Z3 407 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 NBPF14Q5TI25 921 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 NBPF10Q6P3W6 841 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 NBPF15Q8N660 670 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 CTDNEP1O95476 244 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 IFIT1P09914 478 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 RCOR1Q9UKL0 485 aa19.38■□□□□ 0.69
SEMA3B-207ENST00000441915 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 E7EWF7 191 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 CTAGE5O15320 804 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 ADD1P35611 737 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 CCT2P78371 535 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 CHMP4CQ96CF2 233 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 PKD1L3Q7Z443 1732 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 LAMA4Q16363 1823 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 ATL3Q6DD88 541 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 TTLL7Q6ZT98 887 aa19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
SEMA3B-207ENST00000441915 EYA2O00167 538 aa19.36■□□□□ 0.69
SEMA3B-207ENST00000441915 ZNF396Q96N95 335 aaPredicted RBP19.36■□□□□ 0.69
SEMA3B-207ENST00000441915 GOLGA6L19H0YKK7 550 aa19.36■□□□□ 0.69
SEMA3B-207ENST00000441915 RNF113AO15541 343 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms