RNA–Protein interactions for RNA: ENST00000441657.1

SP140-206, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-206ENST00000441657 CAMTA2O94983 1202 aa8.41□□□□□ -1.06
SP140-206ENST00000441657 MKRN3Q13064 507 aaKnown RBP8.41□□□□□ -1.06
SP140-206ENST00000441657 C1orf141Q5JVX7 400 aa8.41□□□□□ -1.06
SP140-206ENST00000441657 ASTLQ6HA08 431 aaPredicted RBP8.41□□□□□ -1.06
SP140-206ENST00000441657 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
SP140-206ENST00000441657 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
SP140-206ENST00000441657 ZFP91Q96JP5 570 aaPredicted RBP8.41□□□□□ -1.06
SP140-206ENST00000441657 GUCD1Q96NT3 240 aa8.41□□□□□ -1.06
SP140-206ENST00000441657 ZNF330Q9Y3S2 320 aaPredicted RBP8.41□□□□□ -1.06
SP140-206ENST00000441657 GTF3C3Q9Y5Q9 886 aa8.41□□□□□ -1.06
SP140-206ENST00000441657 PRAMEF22A3QJZ6 481 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
SP140-206ENST00000441657 EVI5O60447 810 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 IL6STP40189 918 aaPredicted RBP8.4□□□□□ -1.06
SP140-206ENST00000441657 BCAMP50895 628 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 INHBEP58166 350 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 SLC39A6Q13433 755 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 ARHGEF6Q15052 776 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.06
SP140-206ENST00000441657 UBE2Q1Q7Z7E8 422 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 RASEFQ8IZ41 740 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 SUPT20HQ8NEM7 779 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 SHISA4Q96DD7 197 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 GDF15Q99988 308 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 PTCH2Q9Y6C5 1203 aa8.4□□□□□ -1.06
SP140-206ENST00000441657 IRS2Q9Y4H2 1338 aa8.39□□□□□ -1.07
SP140-206ENST00000441657 EGFRP00533 1210 aa8.39□□□□□ -1.07
SP140-206ENST00000441657 SP3Q02447 781 aa8.39□□□□□ -1.07
SP140-206ENST00000441657 TCIRG1Q13488 830 aa8.39□□□□□ -1.07
SP140-206ENST00000441657 FAM109BQ6ICB4 259 aaPredicted RBP8.39□□□□□ -1.07
SP140-206ENST00000441657 MOB2Q70IA6 237 aa8.39□□□□□ -1.07
SP140-206ENST00000441657 IFNL1Q8IU54 200 aa8.39□□□□□ -1.07
SP140-206ENST00000441657 TMX4Q9H1E5 349 aaPredicted RBP8.39□□□□□ -1.07
SP140-206ENST00000441657 GGA3Q9NZ52 723 aa8.39□□□□□ -1.07
SP140-206ENST00000441657 KDM3BQ7LBC6 1761 aa8.38□□□□□ -1.07
SP140-206ENST00000441657 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
SP140-206ENST00000441657 CRY2Q49AN0 593 aa8.38□□□□□ -1.07
SP140-206ENST00000441657 TJAP1Q5JTD0 557 aa8.38□□□□□ -1.07
SP140-206ENST00000441657 CLEC4GQ6UXB4 293 aa8.38□□□□□ -1.07
SP140-206ENST00000441657 MAFAQ8NHW3 353 aaPredicted RBP8.38□□□□□ -1.07
SP140-206ENST00000441657 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
SP140-206ENST00000441657 ROCK2O75116 1388 aaKnown RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 MANSC4A6NHS7 340 aaPredicted RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 TCERG1O14776 1098 aaKnown RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 GTF2E1P29083 439 aaPredicted RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 HOXA10P31260 410 aaPredicted RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 CAP1Q01518 475 aa8.37□□□□□ -1.07
SP140-206ENST00000441657 KIAA2012Q0VF49 1180 aa8.37□□□□□ -1.07
SP140-206ENST00000441657 TTLL12Q14166 644 aaPredicted RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 TDHQ8IZJ6 230 aa8.37□□□□□ -1.07
SP140-206ENST00000441657 SH3TC2Q8TF17 1288 aa8.37□□□□□ -1.07
SP140-206ENST00000441657 RPGRQ92834 1020 aaKnown RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 RTFDC1Q9BY42 306 aaPredicted RBP8.37□□□□□ -1.07
SP140-206ENST00000441657 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
SP140-206ENST00000441657 ZNF652Q9Y2D9 606 aa8.37□□□□□ -1.07
SP140-206ENST00000441657 KIF7Q2M1P5 1343 aa8.36□□□□□ -1.07
SP140-206ENST00000441657 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
SP140-206ENST00000441657 RPS12P25398 132 aaKnown RBP8.36□□□□□ -1.07
SP140-206ENST00000441657 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
SP140-206ENST00000441657 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
SP140-206ENST00000441657 ALYREFQ86V81 257 aaKnown RBP8.36□□□□□ -1.07
SP140-206ENST00000441657 DZIP3Q86Y13 1208 aaKnown RBP8.36□□□□□ -1.07
SP140-206ENST00000441657 KIF12Q96FN5 646 aa8.36□□□□□ -1.07
SP140-206ENST00000441657 CRAMP1Q96RY5 1269 aa8.36□□□□□ -1.07
SP140-206ENST00000441657 TEX13AQ9BXU3 409 aaPredicted RBP8.36□□□□□ -1.07
SP140-206ENST00000441657 METRNQ9UJH8 293 aa8.36□□□□□ -1.07
SP140-206ENST00000441657 HCN4Q9Y3Q4 1203 aa8.36□□□□□ -1.07
SP140-206ENST00000441657 ASTN2O75129 1339 aaPredicted RBP8.35□□□□□ -1.07
SP140-206ENST00000441657 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 YDJCA8MPS7 323 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 PYGBP11216 843 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 GJA8P48165 433 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 CRHR2Q13324 411 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 EIF4A2Q14240 407 aaKnown RBP8.35□□□□□ -1.07
SP140-206ENST00000441657 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 OTUD7BQ6GQQ9 843 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 RBM17Q96I25 401 aaKnown RBP8.35□□□□□ -1.07
SP140-206ENST00000441657 P2RX7Q99572 595 aaKnown RBP8.35□□□□□ -1.07
SP140-206ENST00000441657 TRPC6Q9Y210 931 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
SP140-206ENST00000441657 MUC6Q6W4X9 2439 aa8.35□□□□□ -1.07
SP140-206ENST00000441657 IGF2BP3O00425 579 aaKnown RBP eCLIP8.34□□□□□ -1.07
SP140-206ENST00000441657 PSMD14O00487 310 aa8.34□□□□□ -1.07
SP140-206ENST00000441657 FARP2O94887 1054 aaPredicted RBP8.34□□□□□ -1.07
SP140-206ENST00000441657 GJB1P08034 283 aa8.34□□□□□ -1.07
SP140-206ENST00000441657 ATN1P54259 1190 aaPredicted RBP8.34□□□□□ -1.07
SP140-206ENST00000441657 PTPN12Q05209 780 aaKnown RBP8.34□□□□□ -1.07
SP140-206ENST00000441657 MTFR1Q15390 333 aa8.34□□□□□ -1.07
SP140-206ENST00000441657 ANGEL2Q5VTE6 544 aaKnown RBP8.34□□□□□ -1.07
SP140-206ENST00000441657 FAM161BQ96MY7 647 aa8.34□□□□□ -1.07
SP140-206ENST00000441657 C1QTNF1Q9BXJ1 281 aa8.34□□□□□ -1.07
SP140-206ENST00000441657 ATP6V0A2Q9Y487 856 aa8.34□□□□□ -1.07
SP140-206ENST00000441657 ZNF646O15015 1829 aaPredicted RBP8.33□□□□□ -1.08
SP140-206ENST00000441657 A1BGP04217 495 aa8.33□□□□□ -1.08
SP140-206ENST00000441657 SCARF1Q14162 830 aa8.33□□□□□ -1.08
SP140-206ENST00000441657 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
SP140-206ENST00000441657 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
SP140-206ENST00000441657 ZNF496Q96IT1 587 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms