RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PDE4CQ08493 712 aa23.75■■□□□ 1.39
SHOX2-203ENST00000441443 BMS1Q14692 1282 aaKnown RBP23.75■■□□□ 1.39
SHOX2-203ENST00000441443 RNF20Q5VTR2 975 aa23.75■■□□□ 1.39
SHOX2-203ENST00000441443 CLCN6P51797 869 aa23.74■■□□□ 1.39
SHOX2-203ENST00000441443 BOLA2Q9H3K6 86 aa23.74■■□□□ 1.39
SHOX2-203ENST00000441443 NWD1Q149M9 1564 aa23.74■■□□□ 1.39
SHOX2-203ENST00000441443 GORABQ5T7V8 394 aa23.74■■□□□ 1.39
SHOX2-203ENST00000441443 FHOD1Q9Y613 1164 aa23.74■■□□□ 1.39
SHOX2-203ENST00000441443 CRYBG1Q9Y4K1 1723 aa23.74■■□□□ 1.39
SHOX2-203ENST00000441443 H2AFXP16104 143 aaPredicted RBP23.73■■□□□ 1.39
SHOX2-203ENST00000441443 CAPN2P17655 700 aa23.73■■□□□ 1.39
SHOX2-203ENST00000441443 AIMP1Q12904 312 aaKnown RBP23.73■■□□□ 1.39
SHOX2-203ENST00000441443 E4F1Q66K89 784 aaPredicted RBP23.73■■□□□ 1.39
SHOX2-203ENST00000441443 KRT28Q7Z3Y7 464 aa23.73■■□□□ 1.39
SHOX2-203ENST00000441443 ZNF589Q86UQ0 364 aaPredicted RBP23.73■■□□□ 1.39
SHOX2-203ENST00000441443 FSD1Q9BTV5 496 aa23.73■■□□□ 1.39
SHOX2-203ENST00000441443 CFAP45Q9UL16 551 aa23.73■■□□□ 1.39
SHOX2-203ENST00000441443 ADGRL3Q9HAR2 1447 aa23.73■■□□□ 1.39
SHOX2-203ENST00000441443 HSP90B1P14625 803 aaKnown RBP23.73■■□□□ 1.39
SHOX2-203ENST00000441443 NPHP4O75161 1426 aaPredicted RBP23.72■■□□□ 1.39
SHOX2-203ENST00000441443 PPFIA3O75145 1194 aa23.72■■□□□ 1.39
SHOX2-203ENST00000441443 NBPF11Q86T75 865 aa23.72■■□□□ 1.39
SHOX2-203ENST00000441443 TLR7Q9NYK1 1049 aaKnown RBP23.72■■□□□ 1.39
SHOX2-203ENST00000441443 HNRNPH2P55795 449 aaKnown RBP23.72■■□□□ 1.39
SHOX2-203ENST00000441443 CYP2C19P33261 490 aa23.71■■□□□ 1.39
SHOX2-203ENST00000441443 ARHGAP29Q52LW3 1261 aa23.71■■□□□ 1.39
SHOX2-203ENST00000441443 PPP1R13BQ96KQ4 1090 aa23.71■■□□□ 1.39
SHOX2-203ENST00000441443 LRRC2Q9BYS8 371 aa23.71■■□□□ 1.39
SHOX2-203ENST00000441443 NLRP2Q9NX02 1062 aa23.71■■□□□ 1.39
SHOX2-203ENST00000441443 PROSER3Q2NL68 480 aa23.71■■□□□ 1.39
SHOX2-203ENST00000441443 GIGYF1O75420 1035 aaPredicted RBP23.7■■□□□ 1.39
SHOX2-203ENST00000441443 ARHGEF25Q86VW2 580 aa23.7■■□□□ 1.39
SHOX2-203ENST00000441443 CABLES1Q8TDN4 633 aa23.7■■□□□ 1.39
SHOX2-203ENST00000441443 EAF2Q96CJ1 260 aaPredicted RBP23.7■■□□□ 1.39
SHOX2-203ENST00000441443 KINO60870 393 aaKnown RBP23.7■■□□□ 1.38
SHOX2-203ENST00000441443 AKAP4Q5JQC9 854 aa23.7■■□□□ 1.38
SHOX2-203ENST00000441443 CCDC73Q6ZRK6 1079 aa23.7■■□□□ 1.38
SHOX2-203ENST00000441443 L2HGDHQ9H9P8 463 aa23.7■■□□□ 1.38
SHOX2-203ENST00000441443 ANO10Q9NW15 660 aa23.7■■□□□ 1.38
SHOX2-203ENST00000441443 C9orf78Q9NZ63 289 aaPredicted RBP23.7■■□□□ 1.38
SHOX2-203ENST00000441443 PNMA6AP0CW24 399 aaPredicted RBP23.7■■□□□ 1.38
SHOX2-203ENST00000441443 POLR3GO15318 223 aaPredicted RBP23.69■■□□□ 1.38
SHOX2-203ENST00000441443 CTAGE5O15320 804 aa23.69■■□□□ 1.38
SHOX2-203ENST00000441443 PLA2G4AP47712 749 aa23.69■■□□□ 1.38
SHOX2-203ENST00000441443 EDC3Q96F86 508 aaKnown RBP23.69■■□□□ 1.38
SHOX2-203ENST00000441443 KIF2AO00139 706 aaPredicted RBP23.69■■□□□ 1.38
SHOX2-203ENST00000441443 ADD1P35611 737 aaKnown RBP23.69■■□□□ 1.38
SHOX2-203ENST00000441443 SLC39A6Q13433 755 aa23.69■■□□□ 1.38
SHOX2-203ENST00000441443 CEP57L1Q8IYX8 460 aa23.69■■□□□ 1.38
SHOX2-203ENST00000441443 PLCD3Q8N3E9 789 aa23.69■■□□□ 1.38
SHOX2-203ENST00000441443 Q6ZUG5 572 aa23.68■■□□□ 1.38
SHOX2-203ENST00000441443 ZSCAN16Q9H4T2 348 aaPredicted RBP23.68■■□□□ 1.38
SHOX2-203ENST00000441443 HIP1O00291 1037 aa23.68■■□□□ 1.38
SHOX2-203ENST00000441443 RNMTO43148 476 aaKnown RBP23.68■■□□□ 1.38
SHOX2-203ENST00000441443 SMC2O95347 1197 aa23.68■■□□□ 1.38
SHOX2-203ENST00000441443 GSDMDP57764 484 aa23.68■■□□□ 1.38
SHOX2-203ENST00000441443 TMC6Q7Z403 805 aa23.68■■□□□ 1.38
SHOX2-203ENST00000441443 USP28Q96RU2 1077 aa23.68■■□□□ 1.38
SHOX2-203ENST00000441443 TULP2O00295 520 aa23.67■■□□□ 1.38
SHOX2-203ENST00000441443 SASH1O94885 1247 aa23.67■■□□□ 1.38
SHOX2-203ENST00000441443 CSB-PGBD3P0DP91 1061 aa23.67■■□□□ 1.38
SHOX2-203ENST00000441443 CWF19L2Q2TBE0 894 aaKnown RBP23.67■■□□□ 1.38
SHOX2-203ENST00000441443 ARMCX5Q6P1M9 558 aa23.67■■□□□ 1.38
SHOX2-203ENST00000441443 SIL1Q9H173 461 aa23.67■■□□□ 1.38
SHOX2-203ENST00000441443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.67■■□□□ 1.38
SHOX2-203ENST00000441443 CACNA1FO60840 1977 aa23.67■■□□□ 1.38
SHOX2-203ENST00000441443 LTN1O94822 1766 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 CHD2O14647 1828 aaKnown RBP23.66■■□□□ 1.38
SHOX2-203ENST00000441443 CCDC93Q567U6 631 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 HOMER1Q86YM7 354 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 FSIP1Q8NA03 581 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 FMNL2Q96PY5 1086 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 XPO4Q9C0E2 1151 aaKnown RBP23.66■■□□□ 1.38
SHOX2-203ENST00000441443 ALDH8A1Q9H2A2 487 aaPredicted RBP23.66■■□□□ 1.38
SHOX2-203ENST00000441443 MAP3K2Q9Y2U5 619 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 CEMIPQ8WUJ3 1361 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 ME1P48163 572 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 RCOR1Q9UKL0 485 aa23.66■■□□□ 1.38
SHOX2-203ENST00000441443 SCRN1Q12765 414 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 NEK11Q8NG66 645 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 NEK1Q96PY6 1258 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 KCND1Q9NSA2 647 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.65■■□□□ 1.38
SHOX2-203ENST00000441443 IFNKQ9P0W0 207 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 N4BP2Q86UW6 1770 aaPredicted RBP23.65■■□□□ 1.38
SHOX2-203ENST00000441443 GUCY1B3Q02153 619 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 MTX1Q13505 466 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 CHRNA2Q15822 529 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 ERC1Q8IUD2 1116 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 DNAJC2Q99543 621 aaKnown RBP23.65■■□□□ 1.38
SHOX2-203ENST00000441443 OSBPL5Q9H0X9 879 aaPredicted RBP23.65■■□□□ 1.38
SHOX2-203ENST00000441443 CHGBP05060 677 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 PIP4K2AP48426 406 aaPredicted RBP23.65■■□□□ 1.38
SHOX2-203ENST00000441443 ENGASEQ8NFI3 743 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 BABAM1Q9NWV8 329 aa23.65■■□□□ 1.38
SHOX2-203ENST00000441443 MARF1Q9Y4F3 1742 aaKnown RBP23.65■■□□□ 1.38
SHOX2-203ENST00000441443 TAF5LO75529 589 aa23.64■■□□□ 1.37
SHOX2-203ENST00000441443 FAM160A1Q05DH4 1040 aa23.64■■□□□ 1.37
SHOX2-203ENST00000441443 AMOTQ4VCS5 1084 aa23.64■■□□□ 1.37
SHOX2-203ENST00000441443 SDF4Q9BRK5 362 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms