RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 ERCC6LQ2NKX8 1250 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 CREB3L3Q68CJ9 461 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 TRIM65Q6PJ69 517 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 WAPLQ7Z5K2 1190 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 GPR161Q8N6U8 529 aaKnown RBP9.19□□□□□ -0.94
LMO3-208ENST00000441439 HNRNPLLQ8WVV9 542 aaKnown RBP9.19□□□□□ -0.94
LMO3-208ENST00000441439 EVI5LQ96CN4 794 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
LMO3-208ENST00000441439 LRRFIP2Q9Y608 721 aaKnown RBP9.19□□□□□ -0.94
LMO3-208ENST00000441439 TBC1D8O95759 1140 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 PTH1RQ03431 593 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 TOB2Q14106 344 aaPredicted RBP9.19□□□□□ -0.94
LMO3-208ENST00000441439 LRRFIP1Q32MZ4 808 aaKnown RBP9.19□□□□□ -0.94
LMO3-208ENST00000441439 RSRC2Q7L4I2 434 aaKnown RBP9.19□□□□□ -0.94
LMO3-208ENST00000441439 STK31Q9BXU1 1019 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 TRIM34Q9BYJ4 488 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 CASQ1P31415 396 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 TUBB4BP68371 445 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 TEX2Q8IWB9 1127 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 REXO1L1PQ8IX06 675 aa9.19□□□□□ -0.94
LMO3-208ENST00000441439 F6X3S4 739 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 MAP2K7O14733 419 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 HOXB7P09629 217 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 SRLQ86TD4 932 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 A0A1W2PQ27 194 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 A0A1W2PQ64 194 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 A0A1W2PQD8 194 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 GOLGA6L4A6NEF3 574 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 CPP00450 1065 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
LMO3-208ENST00000441439 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 ARMCX5Q6P1M9 558 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 CC2D1AQ6P1N0 951 aaPredicted RBP9.18□□□□□ -0.94
LMO3-208ENST00000441439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
LMO3-208ENST00000441439 CEP57L1Q8IYX8 460 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 GTF3C6Q969F1 213 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 IGSF1Q8N6C5 1336 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 ERICH4A6NGS2 130 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 SLC27A2O14975 620 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 FAM160A1Q05DH4 1040 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 SULT6B1Q6IMI4 303 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 MCM10Q7L590 875 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 MPHOSPH8Q99549 860 aa9.18□□□□□ -0.94
LMO3-208ENST00000441439 NEDD4P46934 1319 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 SPEF2Q9C093 1822 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 GOLGA6L9A6NEM1 432 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 MYO1CO00159 1063 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 IKBKBO14920 756 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 IVLP07476 585 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 LARP1Q6PKG0 1096 aaKnown RBP9.17□□□□□ -0.94
LMO3-208ENST00000441439 ZNF592Q92610 1267 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 LRP6O75581 1613 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 USP5P45974 858 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 SAFB2Q14151 953 aaKnown RBP eCLIP9.17□□□□□ -0.94
LMO3-208ENST00000441439 KRT32Q14532 448 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 ERC1Q8IUD2 1116 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 AK7Q96M32 723 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 CHMP4AQ9BY43 222 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 STK26Q9P289 416 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 RBM8AQ9Y5S9 174 aaKnown RBP9.17□□□□□ -0.94
LMO3-208ENST00000441439 PARP3Q9Y6F1 533 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 NRDCO43847 1150 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 FBLN1P23142 703 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 MAP3K9P80192 1104 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 ZSCAN26Q16670 478 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 PRPF40BQ6NWY9 871 aaKnown RBP9.17□□□□□ -0.94
LMO3-208ENST00000441439 PPP1R42Q7Z4L9 355 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 UBXN4Q92575 508 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 RABGGTAQ92696 567 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 SMARCE1Q969G3 411 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 ECHDC1Q9NTX5 307 aa9.17□□□□□ -0.94
LMO3-208ENST00000441439 SALL1Q9NSC2 1324 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 DHX16O60231 1041 aaKnown RBP9.16□□□□□ -0.94
LMO3-208ENST00000441439 LTKP29376 864 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 SYT10Q6XYQ8 523 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 FUT8Q9BYC5 575 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 USP16Q9Y5T5 823 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 CEMIPQ8WUJ3 1361 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 BRD3Q15059 726 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 CWC27Q6UX04 472 aaKnown RBP9.16□□□□□ -0.94
LMO3-208ENST00000441439 FBXL16Q8N461 479 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 AGXT2Q9BYV1 514 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
LMO3-208ENST00000441439 ALDH1L1O75891 902 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 SASH3O75995 380 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 ACTN2P35609 894 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 ICE2Q659A1 982 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 SUGP1Q8IWZ8 645 aaKnown RBP9.15□□□□□ -0.94
LMO3-208ENST00000441439 FMR1NBQ8N0W7 255 aaPredicted RBP9.15□□□□□ -0.94
LMO3-208ENST00000441439 LRRN4CLQ8ND94 238 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 BICD2Q8TD16 824 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 GPATCH3Q96I76 525 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 HEG1Q9ULI3 1381 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 CCDC151A5D8V7 595 aa9.15□□□□□ -0.94
LMO3-208ENST00000441439 CPA1P15085 419 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms