RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
CPSF7-205ENST00000439958 USP42Q9H9J4 1324 aaKnown RBP18.12■□□□□ 0.49
CPSF7-205ENST00000439958 MYH14Q7Z406 1995 aaKnown RBP18.12■□□□□ 0.49
CPSF7-205ENST00000439958 CIAO1O76071 339 aa18.12■□□□□ 0.49
CPSF7-205ENST00000439958 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
CPSF7-205ENST00000439958 RASEFQ8IZ41 740 aa18.12■□□□□ 0.49
CPSF7-205ENST00000439958 ZAP70P43403 619 aa18.12■□□□□ 0.49
CPSF7-205ENST00000439958 TFCP2L1Q9NZI6 479 aa18.12■□□□□ 0.49
CPSF7-205ENST00000439958 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
CPSF7-205ENST00000439958 VPS37DQ86XT2 251 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 HAUS7Q99871 368 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 PLA2G12BQ9BX93 195 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 RIPOR2Q9Y4F9 1068 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 TPTE2Q6XPS3 522 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 NLRP3Q96P20 1036 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 LSG1Q9H089 658 aaKnown RBP18.11■□□□□ 0.49
CPSF7-205ENST00000439958 NAP1L2Q9ULW6 460 aaPredicted RBP18.11■□□□□ 0.49
CPSF7-205ENST00000439958 RAD50Q92878 1312 aa18.11■□□□□ 0.49
CPSF7-205ENST00000439958 PDE8BO95263 885 aa18.1■□□□□ 0.49
CPSF7-205ENST00000439958 HSP90B1P14625 803 aaKnown RBP18.1■□□□□ 0.49
CPSF7-205ENST00000439958 PHKA1P46020 1223 aa18.1■□□□□ 0.49
CPSF7-205ENST00000439958 FGD1P98174 961 aa18.1■□□□□ 0.49
CPSF7-205ENST00000439958 ANKRD18AQ8IVF6 992 aa18.1■□□□□ 0.49
CPSF7-205ENST00000439958 FOXD4L6Q3SYB3 417 aaPredicted RBP18.1■□□□□ 0.49
CPSF7-205ENST00000439958 FOXD4L3Q6VB84 417 aaPredicted RBP18.1■□□□□ 0.49
CPSF7-205ENST00000439958 TPRNQ4KMQ1 711 aa18.1■□□□□ 0.49
CPSF7-205ENST00000439958 CDC5LQ99459 802 aaKnown RBP18.09■□□□□ 0.49
CPSF7-205ENST00000439958 CCDC171Q6TFL3 1326 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
CPSF7-205ENST00000439958 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
CPSF7-205ENST00000439958 CLEC4GQ6UXB4 293 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 KBTBD3Q8NAB2 608 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 TAOK2Q9UL54 1235 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 WTIPA6NIX2 430 aaPredicted RBP18.09■□□□□ 0.49
CPSF7-205ENST00000439958 SNX21Q969T3 373 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
CPSF7-205ENST00000439958 APPP05067 770 aa18.08■□□□□ 0.49
CPSF7-205ENST00000439958 CHMP5Q9NZZ3 219 aa18.08■□□□□ 0.49
CPSF7-205ENST00000439958 JAG2Q9Y219 1238 aa18.08■□□□□ 0.49
CPSF7-205ENST00000439958 WNK3Q9BYP7 1800 aa18.08■□□□□ 0.48
CPSF7-205ENST00000439958 SLC5A1P13866 664 aa18.08■□□□□ 0.48
CPSF7-205ENST00000439958 RXRBP28702 533 aa18.08■□□□□ 0.48
CPSF7-205ENST00000439958 ZGPATQ8N5A5 531 aaKnown RBP18.08■□□□□ 0.48
CPSF7-205ENST00000439958 ABCF2Q9UG63 623 aa18.08■□□□□ 0.48
CPSF7-205ENST00000439958 HSPA4P34932 840 aa18.07■□□□□ 0.48
CPSF7-205ENST00000439958 PUM3Q15397 648 aaKnown RBP18.07■□□□□ 0.48
CPSF7-205ENST00000439958 CELF1Q92879 486 aaKnown RBP18.07■□□□□ 0.48
CPSF7-205ENST00000439958 NUP188Q5SRE5 1749 aa18.07■□□□□ 0.48
CPSF7-205ENST00000439958 BCAMP50895 628 aa18.07■□□□□ 0.48
CPSF7-205ENST00000439958 CHRNDQ07001 517 aa18.07■□□□□ 0.48
CPSF7-205ENST00000439958 ADCK5Q3MIX3 580 aa18.07■□□□□ 0.48
CPSF7-205ENST00000439958 CCDC102BQ68D86 513 aa18.07■□□□□ 0.48
CPSF7-205ENST00000439958 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
CPSF7-205ENST00000439958 ATRNO75882 1429 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 TXNRD1Q16881 649 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 TJP1Q07157 1748 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 MCMDC2Q4G0Z9 681 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 VPS53Q5VIR6 699 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 STK11IPQ8N1F8 1099 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 NYXQ9GZU5 481 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 GPR108Q9NPR9 543 aa18.06■□□□□ 0.48
CPSF7-205ENST00000439958 MCAMP43121 646 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 HAND2P61296 217 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 CREB3L3Q68CJ9 461 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 ZNF609O15014 1411 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 NUP98P52948 1817 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 NFIXQ14938 502 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 SLC9C2Q5TAH2 1124 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 RC3H1Q5TC82 1133 aaKnown RBP18.05■□□□□ 0.48
CPSF7-205ENST00000439958 TMX3Q96JJ7 454 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 ONECUT3O60422 494 aaPredicted RBP18.05■□□□□ 0.48
CPSF7-205ENST00000439958 GYG1P46976 350 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 LPIN2Q92539 896 aa18.05■□□□□ 0.48
CPSF7-205ENST00000439958 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
CPSF7-205ENST00000439958 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
CPSF7-205ENST00000439958 MROH5Q6ZUA9 1318 aa18.04■□□□□ 0.48
CPSF7-205ENST00000439958 LRRC2Q9BYS8 371 aa18.04■□□□□ 0.48
CPSF7-205ENST00000439958 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
CPSF7-205ENST00000439958 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.03■□□□□ 0.48
CPSF7-205ENST00000439958 AK9Q5TCS8 1911 aa18.03■□□□□ 0.48
CPSF7-205ENST00000439958 CYP46A1Q9Y6A2 500 aa18.03■□□□□ 0.48
CPSF7-205ENST00000439958 RNF113AO15541 343 aaKnown RBP18.03■□□□□ 0.48
CPSF7-205ENST00000439958 CHAF1AQ13111 956 aaPredicted RBP18.03■□□□□ 0.48
CPSF7-205ENST00000439958 STK3Q13188 491 aa18.03■□□□□ 0.48
CPSF7-205ENST00000439958 FBXO3Q9UK99 471 aa18.03■□□□□ 0.48
CPSF7-205ENST00000439958 SLC51AQ86UW1 340 aa18.02■□□□□ 0.48
CPSF7-205ENST00000439958 GZF1Q9H116 711 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-205ENST00000439958 PDRG1Q9NUG6 133 aa18.02■□□□□ 0.48
CPSF7-205ENST00000439958 LRP2BPQ9P2M1 347 aa18.02■□□□□ 0.48
CPSF7-205ENST00000439958 SLC27A2O14975 620 aa18.02■□□□□ 0.47
CPSF7-205ENST00000439958 ANAPC15P60006 121 aa18.02■□□□□ 0.47
CPSF7-205ENST00000439958 AK2P54819 239 aa18.01■□□□□ 0.47
CPSF7-205ENST00000439958 RPS8P62241 208 aaKnown RBP18.01■□□□□ 0.47
CPSF7-205ENST00000439958 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.01■□□□□ 0.474e-7■■■□□ 16.7
CPSF7-205ENST00000439958 LRRFIP1Q32MZ4 808 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1606.9 ms